Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os06t0505400-01
CDS Infomation	cds chromosome:IRGSP-1.0:6:17973895:17978685:1 gene:Os06g0505400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Abortive infection protein family protein. (Os06t0505400-01)
Sequence	ATGTCCTCCTCCGCCTCCTGCCTCGCCCCTCCCCCTCTTCGTCTCCCGTGCTCCTCCTCC TCCTCCCCCTCTCCCGCCGCCGCCGCGAGGTTCGGTTCTCGGAGGAGGGCGGTAGCCGCG GCTGCTCCGGCCAAGGGATGGAGGCTGGTGCGCGTCTCCTGCTTCAGGCAGGAGGATGTC CCGACGACGTCTGACGACGGGCCCGGCTTCGAGCACATCTCGCGGCCGGAGAGCTCGCGG GGCGCGGAGGCGAGTGGGGAGGAGGGGGAAGGGGAAGGGGAAGGCTCGAGCGGGCAGCGT GAGCGCGGTTCCGGGGAAAGGGATGATTGGTTCCTCAGAGCGCAAGAGATAAAGAGAAAT TTACGAGAAAGAATATTCAGATTTCAGACTCAACGATGGACTGTACCTTGGACCGGAAAA ACCATTGCTCAGGTCATGATTTTATGGATTGCCACATTTTGGTTTGTGGGTTCCTGGATA GTGCCATTTTTGGCTCATGCTGCTGGCTTTAGCAAGGAATCATTGACACATAGGGGCCAA GCACTCTATAGCCTCTTGACGGACATAACTGAAGGCCTTGCTGGAATTGCTATTCTTCAC CATTGTCTTGGTAGATTTCGTCCCCTTCCTCCAGGCTGGTTTGAGTTCAATTTGAAGGGC AGATGGTATTTGGATGTAGCGTTGGGGTGCCTGTTATTCCCGCTGGTCAATTTTCTCTCT CACATCAACATCAACCTAATACCAATGTCATCAGGGCCAGTCCCTGGGGTTTCCAGTGTA GAACAGTCCATTGTGGCCCGTGATCCAGTGGCGATGGTTTTGTATGCTGTGGTGGTCACT GTATGTGCACCTATATGGGAAGAGATTGTGTTCCGAGGTTTCCTCCTTCCATCTCTAACG CGTTACATGCCACTTCCATGGTCAATCCTGGTAAGCGCTGCAGCTTTTGCACTGGCACAC TTCAATGCACAGAGGGTTATGCCTTTGGTTTTTCTTGGTGTTGTGATGGGAGGGGTCTTT GCAAGATCACGCAACTTGTTGGCGTCAATGGTGTTGCACAGCCTATGGAACGGTTTTGTG TTCTTGGATTTGATGAAGTGA

Peptide Sequence

PEP ID	Os06t0505400-01
PEP Infomation	pep chromosome:IRGSP-1.0:6:17973895:17978685:1 gene:Os06g0505400 transcript:Os06t0505400-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Abortive infection protein family protein. (Os06t0505400-01)
Sequence	MSSSASCLAPPPLRLPCSSSSSPSPAAAARFGSRRRAVAAAAPAKGWRLVRVSCFRQEDV PTTSDDGPGFEHISRPESSRGAEASGEEGEGEGEGSSGQRERGSGERDDWFLRAQEIKRN LRERIFRFQTQRWTVPWTGKTIAQVMILWIATFWFVGSWIVPFLAHAAGFSKESLTHRGQ ALYSLLTDITEGLAGIAILHHCLGRFRPLPPGWFEFNLKGRWYLDVALGCLLFPLVNFLS HININLIPMSSGPVPGVSSVEQSIVARDPVAMVLYAVVVTVCAPIWEEIVFRGFLLPSLT RYMPLPWSILVSAAAFALAHFNAQRVMPLVFLGVVMGGVFARSRNLLASMVLHSLWNGFV FLDLMK

Transcript Sequence

Transcript ID	Os06t0505400-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:6:17973895:17978685:1 gene:Os06g0505400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Abortive infection protein family protein. (Os06t0505400-01)
Sequence	AGATTAGAGGCAAGGCAGGCAGGCAGGCAGGGCTCGAGCTCCCCCTTCCCACACCCATGT CCTCCTCCGCCTCCTGCCTCGCCCCTCCCCCTCTTCGTCTCCCGTGCTCCTCCTCCTCCT CCCCCTCTCCCGCCGCCGCCGCGAGGTTCGGTTCTCGGAGGAGGGCGGTAGCCGCGGCTG CTCCGGCCAAGGGATGGAGGCTGGTGCGCGTCTCCTGCTTCAGGCAGGAGGATGTCCCGA CGACGTCTGACGACGGGCCCGGCTTCGAGCACATCTCGCGGCCGGAGAGCTCGCGGGGCG CGGAGGCGAGTGGGGAGGAGGGGGAAGGGGAAGGGGAAGGCTCGAGCGGGCAGCGTGAGC GCGGTTCCGGGGAAAGGGATGATTGGTTCCTCAGAGCGCAAGAGATAAAGAGAAATTTAC GAGAAAGAATATTCAGATTTCAGACTCAACGATGGACTGTACCTTGGACCGGAAAAACCA TTGCTCAGGTCATGATTTTATGGATTGCCACATTTTGGTTTGTGGGTTCCTGGATAGTGC CATTTTTGGCTCATGCTGCTGGCTTTAGCAAGGAATCATTGACACATAGGGGCCAAGCAC TCTATAGCCTCTTGACGGACATAACTGAAGGCCTTGCTGGAATTGCTATTCTTCACCATT GTCTTGGTAGATTTCGTCCCCTTCCTCCAGGCTGGTTTGAGTTCAATTTGAAGGGCAGAT GGTATTTGGATGTAGCGTTGGGGTGCCTGTTATTCCCGCTGGTCAATTTTCTCTCTCACA TCAACATCAACCTAATACCAATGTCATCAGGGCCAGTCCCTGGGGTTTCCAGTGTAGAAC AGTCCATTGTGGCCCGTGATCCAGTGGCGATGGTTTTGTATGCTGTGGTGGTCACTGTAT GTGCACCTATATGGGAAGAGATTGTGTTCCGAGGTTTCCTCCTTCCATCTCTAACGCGTT ACATGCCACTTCCATGGTCAATCCTGGTAAGCGCTGCAGCTTTTGCACTGGCACACTTCA ATGCACAGAGGGTTATGCCTTTGGTTTTTCTTGGTGTTGTGATGGGAGGGGTCTTTGCAA GATCACGCAACTTGTTGGCGTCAATGGTGTTGCACAGCCTATGGAACGGTTTTGTGTTCT TGGATTTGATGAAGTGAGCTATTCTGGTGAGACTGCAACTTCGGGCACCTGAGACAAGTT CTACTAAGACTATGTTTTGCGTCTTTCGTGGAGATGATGAAGACCAGTCTATTCAGGACA CAGGGGACACAAGGTGGTAGTCAGATTTTTGTGGAGAAATTGTGTAGAGTAAAGAGAAAA GAGCAGTTTGTTGGCGCGCTAGTGCAGGAGGAATAGTCTTTAGGGTGTTATTCCTTGGCC TGAGGCCCAGAAGCGTCTTTGTTGCTTTCGTGTAAATTACATACGCATGAGAATAATTGT CTCATCGTGTATAGATTTCCCATTTCGTATTAAATTGTGTATTCGTTTCCCCTAGTGTGG GCTCTGGAAAATAAATTCATTTAGCAAGACGGCCACTATGCATTCGACCGATTCTTTTGC CCATTAGATTAATAAGCTGTAGTGATTCTAAATTCAGAGAAAACTATCAGTATTATGTGT TGAGATGCTTTGAGCGATGTTATGTATCTAAACGTGAATGAGCATTGGTGGTGTTCTGCA TATCTCGTGTGAGTTGTAAAAATCCAGGAGAATGCCTCGATCGATGGAATATTATTTTCA TGGCTCTCTT