Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os06t0503400-01
CDS Infomation

cds chromosome:IRGSP-1.0:6:17836976:17840764:1 gene:Os06g0503400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Reticulon family protein. (Os06t0503400-01)
Sequence

ATGGCCGATCCGGCCGCCGAGGAGACCGTCCCCGCGCCGCCGCCAACCCCGGCGGTCGAC
CCCGCCGAGGGTGCCTCGGACGCGCCGCAGCCGGTCGAGCTGCCCGCCGACACCGCCGCC
GCCTCGCCGGAGAAGGTGTCGTCGCCACCACCGGAGCCGGCGCCGGCGGTGAGGAGCCGG
GGGTTCAGGCTGCTCGGGGAGGACACCTCCGTGCACAAGGCTCTTGGGGGCGGTAAAACT
GCTGATGTACTATTATGGAAAGACAAGAAGACATCCGCTGTAGTGATTGGTGGTGCAACT
GTCATATGGATCTTGTTTGAAGTGCTTGATTACCATCTCTTGACTCTGCTTTCCCATGTG
ATGATTGGTGCCTTGGCCATCTTGTTCCTGTGGTCAAAAGCTACCACATTTATCAAGAAG
AGTCCACCAGATATTCCTGTAGTACAGATACCTGAAGATGTCGCCGTGAACGTGTCACGA
GCATTACGCAGTGACATAAACAGAGCACTTCACCTGTTTCGGGAGATCGCGTTGGGGCAT
GACCTAAAGAAGTTTCTGGGCGTGATTGTTGCTCTCTGGGTTCTCTCAGAAGTAGGAAGC
TGCTGCGACTTCCTCACCTTGATATATGTTGCCGTCCTGATGCTCCACACGGTGCCGATC
TTGTATGACAAGTACCAGGATAAGGTCGACCACTTTGCTGGAAGGGCTCACTCTGAGGCC
TGCAAGCACTATGAGGTGCTGGATGCCAAGGTTTTGAGCAAGATACCCAGGGGCCCGGTG
AAGCCAAAGAAGAACTAG

Peptide Sequence

PEP ID

Os06t0503400-01
PEP Infomation

pep chromosome:IRGSP-1.0:6:17836976:17840764:1 gene:Os06g0503400 transcript:Os06t0503400-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Reticulon family protein. (Os06t0503400-01)
Sequence

MADPAAEETVPAPPPTPAVDPAEGASDAPQPVELPADTAAASPEKVSSPPPEPAPAVRSR
GFRLLGEDTSVHKALGGGKTADVLLWKDKKTSAVVIGGATVIWILFEVLDYHLLTLLSHV
MIGALAILFLWSKATTFIKKSPPDIPVVQIPEDVAVNVSRALRSDINRALHLFREIALGH
DLKKFLGVIVALWVLSEVGSCCDFLTLIYVAVLMLHTVPILYDKYQDKVDHFAGRAHSEA
CKHYEVLDAKVLSKIPRGPVKPKKN

Transcript Sequence

Transcript ID

Os06t0503400-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:6:17836976:17840764:1 gene:Os06g0503400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Reticulon family protein. (Os06t0503400-01)
Sequence

GCCTTTCTCTCTGGTAGCTTCGCCTTGCTCTCCAGCTTCTGCTTTTGCTGCCGCCCATGG
CCGATCCGGCCGCCGAGGAGACCGTCCCCGCGCCGCCGCCAACCCCGGCGGTCGACCCCG
CCGAGGGTGCCTCGGACGCGCCGCAGCCGGTCGAGCTGCCCGCCGACACCGCCGCCGCCT
CGCCGGAGAAGGTGTCGTCGCCACCACCGGAGCCGGCGCCGGCGGTGAGGAGCCGGGGGT
TCAGGCTGCTCGGGGAGGACACCTCCGTGCACAAGGCTCTTGGGGGCGGTAAAACTGCTG
ATGTACTATTATGGAAAGACAAGAAGACATCCGCTGTAGTGATTGGTGGTGCAACTGTCA
TATGGATCTTGTTTGAAGTGCTTGATTACCATCTCTTGACTCTGCTTTCCCATGTGATGA
TTGGTGCCTTGGCCATCTTGTTCCTGTGGTCAAAAGCTACCACATTTATCAAGAAGAGTC
CACCAGATATTCCTGTAGTACAGATACCTGAAGATGTCGCCGTGAACGTGTCACGAGCAT
TACGCAGTGACATAAACAGAGCACTTCACCTGTTTCGGGAGATCGCGTTGGGGCATGACC
TAAAGAAGTTTCTGGGCGTGATTGTTGCTCTCTGGGTTCTCTCAGAAGTAGGAAGCTGCT
GCGACTTCCTCACCTTGATATATGTTGCCGTCCTGATGCTCCACACGGTGCCGATCTTGT
ATGACAAGTACCAGGATAAGGTCGACCACTTTGCTGGAAGGGCTCACTCTGAGGCCTGCA
AGCACTATGAGGTGCTGGATGCCAAGGTTTTGAGCAAGATACCCAGGGGCCCGGTGAAGC
CAAAGAAGAACTAGAATAAGTTGCGCAAGGGGACTCGATTCGGAAGGGTGGCGTCTTTTG
TCGGGTTTGCGAGTTCTCAGGTGTACCCAACTGCGTCGCGTCCTACTGACGGTAGCAGCT
GAATGTTCGTTCTGCTTGATGGGTGGTTTGCTGGCTTCGCTGCTGTGTGCTTCAGTGATG
CCAGTTCATGTTCATTCTATCTTGAAGCCTGTATCTAAAATATCTAAACGTGACTGAATG
CTACGTTTCTGCTACTGAAGCTGCCTGTAGATATCCGTGATAAAACATGATAAACCCTTG
TTCATG