Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os06t0499500-03
CDS Infomation	cds chromosome:IRGSP-1.0:6:17586900:17590594:-1 gene:Os06g0499500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:GH3-7 description:Similar to Indole-3-acetic acid-amido synthetase GH3.17 (EC 6.3.2.-) (Auxin- responsive GH3-like protein 17) (AtGH3-17). (Os06t0499500-01);Similar to GH3.17; indole-3-acetic acid amido synthetase. (Os06t0499500-02);Similar to Indole-3-acetic acid-amido synthetase GH3.17 (EC 6.3.2.-) (Auxin- responsive GH3-like protein 17) (AtGH3-17). (Os06t0499500-03)
Sequence	ATGGCGCTCCTGCTGCCGGAGTTCGACCCGGCGGACGTCCGCGCCGGCCGCGACCTCATC CACCGCCTCACCGCCGACGCCGCCGGCATCCAGCGGGGCGTCCTCCGCGAGATCCTCTCC CGGAACTCCGGCACCGAGTACCTCCGCCGCTTCCTGGGCGGCGCCGCCGGCGACGACGAC GACGTGCGAGACGCATTCAAGAGGCGCGTCCCCGTGTCCGGCTACGAGGATGTCAAGCCG TACGTCGACCGCGTCGCGTCCGGCGGCGAGCCCTCCTCTGCCCTCCTCTGCTCCGACCCC ATCACCTGCCTCAGCAGGAGCTCCGGCACGTCCGGCGGGCAGCAGAAGCTGTTGCCGTCC ACCGCGGAGGAGCTCGACAGGAAGGTATTCTTCTATGCTGTCCAGGCGCTCGTGAGGAAC ATGAGCTTGCACACCGATCATGGTGAAGACGACGACGGCGGTGGTGGCGAGGGAATGTAC CTCATGTTCGCCTTCCACGGTGACCGGACATTGTCTGGCCTGCCCATCCAGTCTGCTCTA ACTACCTACTACCACAGCAGACAGTTTCAGGAATGCGACATTGGCGGGTTTGATAAGTGC ACAAGCCCCCTGGAGGCAATCCTCTGCCCCTATGGCGAGCAGAGCATGTACTGCCAGTTG CTCTGTGGCCTACTTCACCGATGCAGAGTGGACCGTGTTGGTGCCAGCTTTGCCGCTGGG TTGGTTCGGGGGATCAAGTTCTTGGAAAATCACTGGGAGGAGATGTGCTTCAACATCCGG AGCGGGCAGCTCAGCGACTGGATCACGCATACTCCTCTGCGTGATGCGGTCACTGGACAG TATCTTCAAGGATCTAACCCAGCTTTAGCCGATGAGATTGCATCCGAGTGTGCGAGGAAA CCTTGGGATGGGATAGTCAGGAGGCTATGGCCTAGGGCACGGTATATCCGGACCATTGTG ACTGGTTCAATGTCACAGTACATTCCAATTCTTGAGGTTTATGGTGGCGGGCTACCGTTG GTCTCACCAATCTATGCATCTACAGAATGCGCTGCCGGGATAAATCTGAGGCCACTTGAT CCACCATCCCATGTGTCATATGCATTGCTTCCAAACATTGCTTACTTTGAGTTCTTGGAG GTCATGGATGAAAATGGTGAAAAGGTACAAGGAACTACCAGGCTTGATGACAATTTGGGT GAGGTAAAAGTTGTTGACCTTGTGGATGTCAAAGTTGGTCGATGCTATGAGTTGATTGTC ACTACCTTTGCAGGTCTTTACAGGTACCGGGTGGGTGACCTGTTTACTGTGAGTGGCTTC TACAATGCGACGCCATTGTTTCACTTCTCAGGACGGCATGATGTCATCCTAAGCATAGAT TACGAGAAGATAAGTGAGGAGGACCTTCTCAATGCCATTGCAGAAACAGATAAGTTCCAC CTCAGGCCTCTTGGCTACATGCTTGTTGGTAGCACTGCATATGCAGACATATCCACTTTG CCTGGCCACTATATCCTTTTCTGGGAGCTGACCAATACCTGTGATAGCAATGTTGCCATT GACATCGACCAAACTGCCATGGAGAAGTGTTGCTTGGCAGTGGAAGACCACTTCGATGAA ATGTACCGCAAAATTAGGCACCGTGGCTCAATCAGTGCGCTCGAGATAAGGATTCTTAGC CATGGTGCGTTTGATGCTCTGATGGACTTCTTTGTGTCTAGAGGGACATCAGCGAGTCAA TACAAAACTCCGACAGCCATTCGGTCGAAAGAGGCGATGATGGTATTGGAGGAAAGGGTT GTAGGAAGGTTTTTCAGCCAAGCAACTCCCAGCTGTCGTTCAGCCGAATTTGAGAGGAGA TAA

Peptide Sequence

PEP ID	Os06t0499500-03
PEP Infomation	pep chromosome:IRGSP-1.0:6:17586900:17590594:-1 gene:Os06g0499500 transcript:Os06t0499500-03 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:GH3-7 description:Similar to Indole-3-acetic acid-amido synthetase GH3.17 (EC 6.3.2.-) (Auxin- responsive GH3-like protein 17) (AtGH3-17). (Os06t0499500-01);Similar to GH3.17; indole-3-acetic acid amido synthetase. (Os06t0499500-02);Similar to Indole-3-acetic acid-amido synthetase GH3.17 (EC 6.3.2.-) (Auxin- responsive GH3-like protein 17) (AtGH3-17). (Os06t0499500-03)
Sequence	MALLLPEFDPADVRAGRDLIHRLTADAAGIQRGVLREILSRNSGTEYLRRFLGGAAGDDD DVRDAFKRRVPVSGYEDVKPYVDRVASGGEPSSALLCSDPITCLSRSSGTSGGQQKLLPS TAEELDRKVFFYAVQALVRNMSLHTDHGEDDDGGGGEGMYLMFAFHGDRTLSGLPIQSAL TTYYHSRQFQECDIGGFDKCTSPLEAILCPYGEQSMYCQLLCGLLHRCRVDRVGASFAAG LVRGIKFLENHWEEMCFNIRSGQLSDWITHTPLRDAVTGQYLQGSNPALADEIASECARK PWDGIVRRLWPRARYIRTIVTGSMSQYIPILEVYGGGLPLVSPIYASTECAAGINLRPLD PPSHVSYALLPNIAYFEFLEVMDENGEKVQGTTRLDDNLGEVKVVDLVDVKVGRCYELIV TTFAGLYRYRVGDLFTVSGFYNATPLFHFSGRHDVILSIDYEKISEEDLLNAIAETDKFH LRPLGYMLVGSTAYADISTLPGHYILFWELTNTCDSNVAIDIDQTAMEKCCLAVEDHFDE MYRKIRHRGSISALEIRILSHGAFDALMDFFVSRGTSASQYKTPTAIRSKEAMMVLEERV VGRFFSQATPSCRSAEFERR

Transcript Sequence

Transcript ID	Os06t0499500-03
Transcript Infomation	cdna chromosome:IRGSP-1.0:6:17586900:17590594:-1 gene:Os06g0499500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:GH3-7 description:Similar to Indole-3-acetic acid-amido synthetase GH3.17 (EC 6.3.2.-) (Auxin- responsive GH3-like protein 17) (AtGH3-17). (Os06t0499500-01);Similar to GH3.17; indole-3-acetic acid amido synthetase. (Os06t0499500-02);Similar to Indole-3-acetic acid-amido synthetase GH3.17 (EC 6.3.2.-) (Auxin- responsive GH3-like protein 17) (AtGH3-17). (Os06t0499500-03)
Sequence	ACTGTTACCAGTTGGTGTGATTCTCCAGCCGAAACTTCACCAACCAAGCAGGAATGGCGC TCCTGCTGCCGGAGTTCGACCCGGCGGACGTCCGCGCCGGCCGCGACCTCATCCACCGCC TCACCGCCGACGCCGCCGGCATCCAGCGGGGCGTCCTCCGCGAGATCCTCTCCCGGAACT CCGGCACCGAGTACCTCCGCCGCTTCCTGGGCGGCGCCGCCGGCGACGACGACGACGTGC GAGACGCATTCAAGAGGCGCGTCCCCGTGTCCGGCTACGAGGATGTCAAGCCGTACGTCG ACCGCGTCGCGTCCGGCGGCGAGCCCTCCTCTGCCCTCCTCTGCTCCGACCCCATCACCT GCCTCAGCAGGAGCTCCGGCACGTCCGGCGGGCAGCAGAAGCTGTTGCCGTCCACCGCGG AGGAGCTCGACAGGAAGGTATTCTTCTATGCTGTCCAGGCGCTCGTGAGGAACATGAGCT TGCACACCGATCATGGTGAAGACGACGACGGCGGTGGTGGCGAGGGAATGTACCTCATGT TCGCCTTCCACGGTGACCGGACATTGTCTGGCCTGCCCATCCAGTCTGCTCTAACTACCT ACTACCACAGCAGACAGTTTCAGGAATGCGACATTGGCGGGTTTGATAAGTGCACAAGCC CCCTGGAGGCAATCCTCTGCCCCTATGGCGAGCAGAGCATGTACTGCCAGTTGCTCTGTG GCCTACTTCACCGATGCAGAGTGGACCGTGTTGGTGCCAGCTTTGCCGCTGGGTTGGTTC GGGGGATCAAGTTCTTGGAAAATCACTGGGAGGAGATGTGCTTCAACATCCGGAGCGGGC AGCTCAGCGACTGGATCACGCATACTCCTCTGCGTGATGCGGTCACTGGACAGTATCTTC AAGGATCTAACCCAGCTTTAGCCGATGAGATTGCATCCGAGTGTGCGAGGAAACCTTGGG ATGGGATAGTCAGGAGGCTATGGCCTAGGGCACGGTATATCCGGACCATTGTGACTGGTT CAATGTCACAGTACATTCCAATTCTTGAGGTTTATGGTGGCGGGCTACCGTTGGTCTCAC CAATCTATGCATCTACAGAATGCGCTGCCGGGATAAATCTGAGGCCACTTGATCCACCAT CCCATGTGTCATATGCATTGCTTCCAAACATTGCTTACTTTGAGTTCTTGGAGGTCATGG ATGAAAATGGTGAAAAGGTACAAGGAACTACCAGGCTTGATGACAATTTGGGTGAGGTAA AAGTTGTTGACCTTGTGGATGTCAAAGTTGGTCGATGCTATGAGTTGATTGTCACTACCT TTGCAGGTCTTTACAGGTACCGGGTGGGTGACCTGTTTACTGTGAGTGGCTTCTACAATG CGACGCCATTGTTTCACTTCTCAGGACGGCATGATGTCATCCTAAGCATAGATTACGAGA AGATAAGTGAGGAGGACCTTCTCAATGCCATTGCAGAAACAGATAAGTTCCACCTCAGGC CTCTTGGCTACATGCTTGTTGGTAGCACTGCATATGCAGACATATCCACTTTGCCTGGCC ACTATATCCTTTTCTGGGAGCTGACCAATACCTGTGATAGCAATGTTGCCATTGACATCG ACCAAACTGCCATGGAGAAGTGTTGCTTGGCAGTGGAAGACCACTTCGATGAAATGTACC GCAAAATTAGGCACCGTGGCTCAATCAGTGCGCTCGAGATAAGGATTCTTAGCCATGGTG CGTTTGATGCTCTGATGGACTTCTTTGTGTCTAGAGGGACATCAGCGAGTCAATACAAAA CTCCGACAGCCATTCGGTCGAAAGAGGCGATGATGGTATTGGAGGAAAGGGTTGTAGGAA GGTTTTTCAGCCAAGCAACTCCCAGCTGTCGTTCAGCCGAATTTGAGAGGAGATAATAAT TGTACTGCCTGTTCGGTTGGCGTCTCGGTGACAGGAGAGGGCATGTTCCTTATGAAAAGT TCAGTCCTGATCACGAATAAGTGGCGCAGCATTGCAATTCGTGCACTGGAGAAGGATGAT CCACTCATCTCCATCTTGGCACGTCCTTTTTCAGTCTGGAATTTGGTCTCAGGAGTATCA TTTCGTGTTTTCTTGTAAATTCAGAAAGAACTTCTGTACTGCTCCTTCCACATAGCCTTT GGGCGTAACTGTAGACACAACCCTTGCTCCGAGGTTTATAAGTTACCTCCGAATTTACTG ATTGACTGTGTTCTCAAGTCC