Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os06t0498500-02
CDS Infomation	cds chromosome:IRGSP-1.0:6:17505186:17511961:1 gene:Os06g0498500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:NUCLEOLAR COMPLEX-ASSOCIATED PROTEIN 3 description:CCAAT-binding factor domain containing protein. (Os06t0498500-01);CCAAT-binding factor domain containing protein. (Os06t0498500-02)
Sequence	ATGGGGAAGAGCAGCAGCAAGAAGAAGAAGGACAAGGTGATCCTGCCCCCGCAGCTGCCG CCGGAGGTGGACGACGACGACGTGGTGGTCTCTGACGAGGACGTCGAGTTCTTCAGGGGC AACGAGGGCCACGCCCGCGCGCTCGCCACGCTCGACAGGAAGTCCATCGACAGCTACGTC ACCAGGGTCGCCCACCACGACGAGGACGAGGTCGAGCGCCTCTACGAGGAGCGCGAGCGC AGGAGGAAGGCGGTCGAGGCCCTCAGGCCCAAGAACCACGACGACGACGACTTCGAGGTC GACCGCGTCGACGCCCTCCCCGTCAAGACCCTGCAAGGGGAGCTGGTCTACAACAACGCC AAGAAAGCGAGATTTGATGACAGTTCTAATAATGTTGAATCTAAATCTGAAGACAAAGTA GGAAATTCCAAACAAACTATTCAAAAGGGAGAACGGAAGGAAAAATCCAAAAGCAAAAAG GGAGATGGTAAATTGCAAAATGTGCAAGCTCAAACTGAAGCTTCAAATGGAAAATTACAA TCAAAAGTGCTGGAGGAGGTGAAGGAGGAACTTTCAGCTGAGGAATTATTTGAGAAAAAG AAGGCCCAGCTGGCTGAAATAGGGATGTCTATGCTTGAAGATCCTGAATCACATATTAGA TCTCTAAATGATATGTTAAACATATGCAATGACAAAGACCAGAAGGTTGTTAAACTTAGT CTGATGTCCTTGCTTGCTGTGTTCAGGGACATTATTCCTAGTTACCGCATTAGGCAGTTG ACAGAAAAAGAGCTTACGGTAGAGGTTTCAAAAGATGTAAAAAAGATGAGATATTATGAA TACACACTTCTTCGCTCCTACAAGGCATACCTGCAAAAGTTAATCTCCTTGGAGAAGCAA CCAAATTTTTCCGCTCTGGCTGTTCGTTGCATGTGTACTTTACTAGATACTGCTCCACAT TTCAACTTCCGTGAAAGTATACTTGCCAGCGTGGCAAGAAATTTAAGTTCTCCAGATGAT GCAGTGAGGAAAATGTGTTGTGAAACGATAAGGTCTCTATTTGTAGATGAAGGAAAGCAT CGTGGTGAGGCAACTGTTGAAGCTGTGAGATTGATTGCTGATCATGTGAAGCTAAACGAT TGCCAGCTTCATCCTGATAGCATTGAGGTCTTCCTATCTTTGAGATTTGATGATGATCTT GGAAAAGATGACACAGAGGAAGAAAAGGGAAAACCAAAGAAGAACAAACGACGACAAAAC CAGGAAGTCCCAAAGCAATTGCCAGTGAGTGATAATAAGAAAGCCAAACAGGAATTGATC TCAAAGGCTAGAGAAGAGGTTGATGCTGAACTTAGATCTGTTTCCTTTACTCTTGATCCA AAGGAAAGGAGAAGGATACAGAAAGAAGCACTCTCTGCTCTTTTTGAGACTTACTTTCGG ATTTTGAAGCATAGCATGAGTATTTCAAATTCCAGGGGCAAGGTCATTAATGTCTCCCCA GATGGCTCACACCCACTACTTGCTCCATGTTTGGAGGGTTTAGGAAAATTCTCACACTTA ATTGATTTGGATTTCATGGGTGAACTTGTCGCGTGCCTCAAGAAGCTTTCTGGGTATACC GACCATCACTCTGGCACAGTACATGACAATACACTGTCTGTATCAGAACGTCTGCAGTGC TGCATAGTTGCATTTAAAGTCTGGAGGAGCAACCTTGAAGCTCTGAATGTAGACCTGCAA GACTTCTTTGTGCAGCTTTTTAACCTCATTCTGGAGTATCGGCCTGACAGAGATCGTGGT GAGGTATTAGCTGATGCTCTGAAGACACTTCTCTGGGAAGGCAAACAGCAGGATATGATA AGAGCAGCTGCTTTCATTAAACGCCTAGCAACCTTTGCTTTGTCCTTTGGTTCTGCAGAA GCCATGGCAGCATTAATCACACTGAAGCATCTTCTTCAAAAGAATAGCAAGTGCAGAAAC ATGTTGGAAAATGATTCTGGTGGTGGCTCCCTGTCTTGCTTAGTTGCGAAATATGACCCA GAAGCTAAAGATCCTTATCTGAGTGGGGCACTTGCCTCAGTCCTATGGGAGCTTAGCCTT CTGCAGAAGCATTACGATTCCTCTGTTTCCTCAATGGCCTCAAATATCTTGAGCATGGCC AATTTGAATCCTACACAGAATCCTGTTCCAATTTCAAATGCAAGCCCTCTAGAAGCATAT AGAGACTTGTCAATGGAACGGAAATTGTCTAAACCAGCGAATAAATTGTTGCCACTAAAC TGCAGAAAGAAGAGGCGTGGTAAGGAGTTTGTTGCCCTAAGCCCTGCAGCGCTCGAGGGA TCAGATTGCGTTGCGGGTGGAGATGAACTCAAAGAGAAGTTAAAAAATCATTTTGCGGTA CTAAGAGGTATCTCAGAGAATGAGAGATTGAGAGCTGAGCTGAACCACACGTTGTCATCC ATCAACTTGTACAAGGAATACAAGAAGCAGAAGAAAAGCAGGAAATCAAAGGCTGTTAAG AAAAAGGTTTCAAGGGCTTAA

Peptide Sequence

PEP ID	Os06t0498500-02
PEP Infomation	pep chromosome:IRGSP-1.0:6:17505186:17511961:1 gene:Os06g0498500 transcript:Os06t0498500-02 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:NUCLEOLAR COMPLEX-ASSOCIATED PROTEIN 3 description:CCAAT-binding factor domain containing protein. (Os06t0498500-01);CCAAT-binding factor domain containing protein. (Os06t0498500-02)
Sequence	MGKSSSKKKKDKVILPPQLPPEVDDDDVVVSDEDVEFFRGNEGHARALATLDRKSIDSYV TRVAHHDEDEVERLYEERERRRKAVEALRPKNHDDDDFEVDRVDALPVKTLQGELVYNNA KKARFDDSSNNVESKSEDKVGNSKQTIQKGERKEKSKSKKGDGKLQNVQAQTEASNGKLQ SKVLEEVKEELSAEELFEKKKAQLAEIGMSMLEDPESHIRSLNDMLNICNDKDQKVVKLS LMSLLAVFRDIIPSYRIRQLTEKELTVEVSKDVKKMRYYEYTLLRSYKAYLQKLISLEKQ PNFSALAVRCMCTLLDTAPHFNFRESILASVARNLSSPDDAVRKMCCETIRSLFVDEGKH RGEATVEAVRLIADHVKLNDCQLHPDSIEVFLSLRFDDDLGKDDTEEEKGKPKKNKRRQN QEVPKQLPVSDNKKAKQELISKAREEVDAELRSVSFTLDPKERRRIQKEALSALFETYFR ILKHSMSISNSRGKVINVSPDGSHPLLAPCLEGLGKFSHLIDLDFMGELVACLKKLSGYT DHHSGTVHDNTLSVSERLQCCIVAFKVWRSNLEALNVDLQDFFVQLFNLILEYRPDRDRG EVLADALKTLLWEGKQQDMIRAAAFIKRLATFALSFGSAEAMAALITLKHLLQKNSKCRN MLENDSGGGSLSCLVAKYDPEAKDPYLSGALASVLWELSLLQKHYDSSVSSMASNILSMA NLNPTQNPVPISNASPLEAYRDLSMERKLSKPANKLLPLNCRKKRRGKEFVALSPAALEG SDCVAGGDELKEKLKNHFAVLRGISENERLRAELNHTLSSINLYKEYKKQKKSRKSKAVK KKVSRA

Transcript Sequence

Transcript ID	Os06t0498500-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:6:17505186:17511961:1 gene:Os06g0498500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:NUCLEOLAR COMPLEX-ASSOCIATED PROTEIN 3 description:CCAAT-binding factor domain containing protein. (Os06t0498500-01);CCAAT-binding factor domain containing protein. (Os06t0498500-02)
Sequence	GCCGCCGCGGACGAAACCCTAGCTAAAACCCTCCTCTCCCTCTCCCTCTCCCTCTCACCG AGCCGCGCGGCCTCGCCAAGGACCGGCAGCGATGGGGAAGAGCAGCAGCAAGAAGAAGAA GGACAAGGTGATCCTGCCCCCGCAGCTGCCGCCGGAGGTGGACGACGACGACGTGGTGGT CTCTGACGAGGACGTCGAGTTCTTCAGGGGCAACGAGGGCCACGCCCGCGCGCTCGCCAC GCTCGACAGGAAGTCCATCGACAGCTACGTCACCAGGGTCGCCCACCACGACGAGGACGA GGTCGAGCGCCTCTACGAGGAGCGCGAGCGCAGGAGGAAGGCGGTCGAGGCCCTCAGGCC CAAGAACCACGACGACGACGACTTCGAGGTCGACCGCGTCGACGCCCTCCCCGTCAAGAC CCTGCAAGGGGAGCTGGTCTACAACAACGCCAAGAAAGCGAGATTTGATGACAGTTCTAA TAATGTTGAATCTAAATCTGAAGACAAAGTAGGAAATTCCAAACAAACTATTCAAAAGGG AGAACGGAAGGAAAAATCCAAAAGCAAAAAGGGAGATGGTAAATTGCAAAATGTGCAAGC TCAAACTGAAGCTTCAAATGGAAAATTACAATCAAAAGTGCTGGAGGAGGTGAAGGAGGA ACTTTCAGCTGAGGAATTATTTGAGAAAAAGAAGGCCCAGCTGGCTGAAATAGGGATGTC TATGCTTGAAGATCCTGAATCACATATTAGATCTCTAAATGATATGTTAAACATATGCAA TGACAAAGACCAGAAGGTTGTTAAACTTAGTCTGATGTCCTTGCTTGCTGTGTTCAGGGA CATTATTCCTAGTTACCGCATTAGGCAGTTGACAGAAAAAGAGCTTACGGTAGAGGTTTC AAAAGATGTAAAAAAGATGAGATATTATGAATACACACTTCTTCGCTCCTACAAGGCATA CCTGCAAAAGTTAATCTCCTTGGAGAAGCAACCAAATTTTTCCGCTCTGGCTGTTCGTTG CATGTGTACTTTACTAGATACTGCTCCACATTTCAACTTCCGTGAAAGTATACTTGCCAG CGTGGCAAGAAATTTAAGTTCTCCAGATGATGCAGTGAGGAAAATGTGTTGTGAAACGAT AAGGTCTCTATTTGTAGATGAAGGAAAGCATCGTGGTGAGGCAACTGTTGAAGCTGTGAG ATTGATTGCTGATCATGTGAAGCTAAACGATTGCCAGCTTCATCCTGATAGCATTGAGGT CTTCCTATCTTTGAGATTTGATGATGATCTTGGAAAAGATGACACAGAGGAAGAAAAGGG AAAACCAAAGAAGAACAAACGACGACAAAACCAGGAAGTCCCAAAGCAATTGCCAGTGAG TGATAATAAGAAAGCCAAACAGGAATTGATCTCAAAGGCTAGAGAAGAGGTTGATGCTGA ACTTAGATCTGTTTCCTTTACTCTTGATCCAAAGGAAAGGAGAAGGATACAGAAAGAAGC ACTCTCTGCTCTTTTTGAGACTTACTTTCGGATTTTGAAGCATAGCATGAGTATTTCAAA TTCCAGGGGCAAGGTCATTAATGTCTCCCCAGATGGCTCACACCCACTACTTGCTCCATG TTTGGAGGGTTTAGGAAAATTCTCACACTTAATTGATTTGGATTTCATGGGTGAACTTGT CGCGTGCCTCAAGAAGCTTTCTGGGTATACCGACCATCACTCTGGCACAGTACATGACAA TACACTGTCTGTATCAGAACGTCTGCAGTGCTGCATAGTTGCATTTAAAGTCTGGAGGAG CAACCTTGAAGCTCTGAATGTAGACCTGCAAGACTTCTTTGTGCAGCTTTTTAACCTCAT TCTGGAGTATCGGCCTGACAGAGATCGTGGTGAGGTATTAGCTGATGCTCTGAAGACACT TCTCTGGGAAGGCAAACAGCAGGATATGATAAGAGCAGCTGCTTTCATTAAACGCCTAGC AACCTTTGCTTTGTCCTTTGGTTCTGCAGAAGCCATGGCAGCATTAATCACACTGAAGCA TCTTCTTCAAAAGAATAGCAAGTGCAGAAACATGTTGGAAAATGATTCTGGTGGTGGCTC CCTGTCTTGCTTAGTTGCGAAATATGACCCAGAAGCTAAAGATCCTTATCTGAGTGGGGC ACTTGCCTCAGTCCTATGGGAGCTTAGCCTTCTGCAGAAGCATTACGATTCCTCTGTTTC CTCAATGGCCTCAAATATCTTGAGCATGGCCAATTTGAATCCTACACAGAATCCTGTTCC AATTTCAAATGCAAGCCCTCTAGAAGCATATAGAGACTTGTCAATGGAACGGAAATTGTC TAAACCAGCGAATAAATTGTTGCCACTAAACTGCAGAAAGAAGAGGCGTGGTAAGGAGTT TGTTGCCCTAAGCCCTGCAGCGCTCGAGGGATCAGATTGCGTTGCGGGTGGAGATGAACT CAAAGAGAAGTTAAAAAATCATTTTGCGGTACTAAGAGGTATCTCAGAGAATGAGAGATT GAGAGCTGAGCTGAACCACACGTTGTCATCCATCAACTTGTACAAGGAATACAAGAAGCA GAAGAAAAGCAGGAAATCAAAGGCTGTTAAGAAAAAGGTTTCAAGGGCTTAAGTTGTGCT GCGTTTGGGGGAAATTTTTGCACACCAGGGACCAAAGGTGTGCAGAATGAACAATTTTGC CATACCCACTTTGTAGCTTATCGTAGCTTTTGGGTGTAACACATTTGCAGTTCCAAGCAT TTCTTTTTAAGCTCGTTCTATTTCCTGACATGTCCTTTTATTCTTGTTGCCTGGACCTAA CCAGGCTAACAAGTTTGCTGCCGCTGTACAAGATATAACAGTGGCATGCTTGTGTTATCT ATATATATTGTTATGCATGAACAATGCCATCCCCTATGCAAAACTACAGATTGGTAGTCG CAAGGTGTAGGGTGCTCGCGCAGAAAGGGGGAAAAATAGTAGGTTTTACTGTCCACTAGC AAAATATCCATGTTTTGCTATGTTAAAGTACACATTTATTTGAATATATGTTTTTCATAT TT