Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os06t0496400-01
CDS Infomation	cds chromosome:IRGSP-1.0:6:17348908:17350328:1 gene:Os06g0496400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:basic helix-loop-helix protein 127 description:ROOT HAIR DEFECTIVE-SIX LIKE (RSL) class I basic helix-loop-helix protein, bHLH transcription factor, Regulation of root hair development (Os06t0496400-01)
Sequence	ATGGCTATGGTGGCCGGCGACGAGGCGATGTCAGTGCCATGGCACGACGTCGGCGTCGTC GTCGACCCCGAGGCGGCCGGGACGGCGCCGTTCGACGCCGGCGCCGGCTATGTCCCATCG TACGGTCAGTGCCAATACTACTACTACTACGACGACCACCACCACCACCCGTGCAGCACG GAGCTGATCCACGCGGGCGACGCTGGCAGTGCGGTTGCGGTTGCGTACGACGGCGTCGAC GGCTGGGTTCACGCCGCCGCCGCAGCCACCTCCCCGTCCTCGTCATCTGCGCTCACCTTC GATGGTCACGGCGCCGAGGAGCACAGCGCAGTGTCGTGGATGGACATGGACATGGACGCG CACGGCGCCGCGCCTCCCCTAATCGGCTACGGCCCGACGGCGGCGACCTCCTCCCCCTCC TCCTGCTTCAGCTCCGGCGGCTCCGGCGACAGCGGCATGGTGATGGTGACCACCACCACC CCGAGGAGCGCCGCCGCCTCTGGTTCGCAGAGGCGGGCACGCCCGCCGCCGTCGCCGTTG CAGGGATCAGAGCTGCACGAGTACTCCAAGAAGCAGCGCGCCAACAACAAGGAGACACAG AGCTCAGCTGCCAAGAGCCGGCGGGAGAGGATCAGCGAGCGGCTGAGGGCGCTGCAGGAG CTGGTGCCGAGCGGCGGGAAGGTGGACATGGTGACCATGCTGGACAGGGCCATCAGCTAC GTCAAGTTCATGCAGATGCAGCTCAGGGTGCTGGAGACCGACGCGTTCTGGCCGGCGTCC GACGGCGCCACGCCGGACATCTCCCGGGTCAAGGACGCGCTCGACGCCATCATCCTCTCC TCGTCCTCGCCCTCGCAAAAGGCTTCTCCTCCTCGGTCGGGCTAG

Peptide Sequence

PEP ID	Os06t0496400-01
PEP Infomation	pep chromosome:IRGSP-1.0:6:17348908:17350328:1 gene:Os06g0496400 transcript:Os06t0496400-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:basic helix-loop-helix protein 127 description:ROOT HAIR DEFECTIVE-SIX LIKE (RSL) class I basic helix-loop-helix protein, bHLH transcription factor, Regulation of root hair development (Os06t0496400-01)
Sequence	MAMVAGDEAMSVPWHDVGVVVDPEAAGTAPFDAGAGYVPSYGQCQYYYYYDDHHHHPCST ELIHAGDAGSAVAVAYDGVDGWVHAAAAATSPSSSSALTFDGHGAEEHSAVSWMDMDMDA HGAAPPLIGYGPTAATSSPSSCFSSGGSGDSGMVMVTTTTPRSAAASGSQRRARPPPSPL QGSELHEYSKKQRANNKETQSSAAKSRRERISERLRALQELVPSGGKVDMVTMLDRAISY VKFMQMQLRVLETDAFWPASDGATPDISRVKDALDAIILSSSSPSQKASPPRSG

Transcript Sequence

Transcript ID	Os06t0496400-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:6:17348908:17350328:1 gene:Os06g0496400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:basic helix-loop-helix protein 127 description:ROOT HAIR DEFECTIVE-SIX LIKE (RSL) class I basic helix-loop-helix protein, bHLH transcription factor, Regulation of root hair development (Os06t0496400-01)
Sequence	GCGCTCTTGTTTAATCGTCGTCTTCCCCATTGGCCATGTGGGTGTCCCTCTCCATGGAAT CCATGGCGCAGCTCAGCTCCCATATAATCCATGGCGCACACTGTCTTGCCAGTTGCCACA TTAATTCAGCATCCCTCTGCTTAATTGCTTCGTAGCATACCAAGTAGTAGTGGTAGCAGC AGCAGCAGCAGCAAGTAGCACCTGTGCTTACTCGCCATGGCTATGGTGGCCGGCGACGAG GCGATGTCAGTGCCATGGCACGACGTCGGCGTCGTCGTCGACCCCGAGGCGGCCGGGACG GCGCCGTTCGACGCCGGCGCCGGCTATGTCCCATCGTACGGTCAGTGCCAATACTACTAC TACTACGACGACCACCACCACCACCCGTGCAGCACGGAGCTGATCCACGCGGGCGACGCT GGCAGTGCGGTTGCGGTTGCGTACGACGGCGTCGACGGCTGGGTTCACGCCGCCGCCGCA GCCACCTCCCCGTCCTCGTCATCTGCGCTCACCTTCGATGGTCACGGCGCCGAGGAGCAC AGCGCAGTGTCGTGGATGGACATGGACATGGACGCGCACGGCGCCGCGCCTCCCCTAATC GGCTACGGCCCGACGGCGGCGACCTCCTCCCCCTCCTCCTGCTTCAGCTCCGGCGGCTCC GGCGACAGCGGCATGGTGATGGTGACCACCACCACCCCGAGGAGCGCCGCCGCCTCTGGT TCGCAGAGGCGGGCACGCCCGCCGCCGTCGCCGTTGCAGGGATCAGAGCTGCACGAGTAC TCCAAGAAGCAGCGCGCCAACAACAAGGAGACACAGAGCTCAGCTGCCAAGAGCCGGCGG GAGAGGATCAGCGAGCGGCTGAGGGCGCTGCAGGAGCTGGTGCCGAGCGGCGGGAAGGTG GACATGGTGACCATGCTGGACAGGGCCATCAGCTACGTCAAGTTCATGCAGATGCAGCTC AGGGTGCTGGAGACCGACGCGTTCTGGCCGGCGTCCGACGGCGCCACGCCGGACATCTCC CGGGTCAAGGACGCGCTCGACGCCATCATCCTCTCCTCGTCCTCGCCCTCGCAAAAGGCT TCTCCTCCTCGGTCGGGCTAGCAAATATATCGACGAGCTTCCGATCTCCCAAAATCCAAA TTACGCTTACTTGCAACTCCGGATGTTGCATTCATTTTGTTCGTCATGCATGTATAATTT CCCGGCTTTGCTATGTAATTAACTACTGTATTACGTCGTGCTAATTAGCTAATGATACAT GCTATTTTGCGTTGCT