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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os06t0494000-02
CDS Infomation

cds chromosome:IRGSP-1.0:6:17158858:17159819:1 gene:Os06g0494000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Paired amphipathic helix domain containing protein. (Os06t0494000-01);Hypothetical conserved gene. (Os06t0494000-02)
Sequence

TCCGTTCTGTTTCGAGTGCAGCTTTCACTTCTTTTCCGGGATCACGACGATCTGCTGGAA
GAGCTAGCGAAGTTCAGACCCCTTCCTACCCCAAGCACAGTTTATAGCCACAGCTCAGTC
TGGCTGCTCTTCTTCCTAATGCCCCTCCTTGTCCTAAGCATTCTCCTCAAGTGCTTCCTT
CTTCAACAGCCAGTTGCAAGCTGA

Peptide Sequence

PEP ID

Os06t0494000-02
PEP Infomation

pep chromosome:IRGSP-1.0:6:17158858:17159819:1 gene:Os06g0494000 transcript:Os06t0494000-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Paired amphipathic helix domain containing protein. (Os06t0494000-01);Hypothetical conserved gene. (Os06t0494000-02)
Sequence

SVLFRVQLSLLFRDHDDLLEELAKFRPLPTPSTVYSHSSVWLLFFLMPLLVLSILLKCFL
LQQPVAS

Transcript Sequence

Transcript ID

Os06t0494000-02
Transcript Infomation

cdna chromosome:IRGSP-1.0:6:17158858:17159819:1 gene:Os06g0494000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Paired amphipathic helix domain containing protein. (Os06t0494000-01);Hypothetical conserved gene. (Os06t0494000-02)
Sequence

ATCCATGCTTTTCCTGGAAGGAGTACAGAAAATCCAAGGCAAATATAGTTATTACAACAG
ATTGGAACATCTGTGATTTAAGTTGGGAAACGAAATATCTGAACTATTAAAAAATTGAAG
TCATGAACATTTAGGAAATTTCTTTACTTTTTCAAGACATAAATATTGAATCTCCTCAGT
AACTCCTATATGGGATACAGCAGCAATGCACAGTAATAAAAAAAACCAAAGCTAAAGTAT
TTAGAATGATATTGAGCATATTAACCTGTAGTAAAATTGTTTTATATATTATAGTAAGCT
ATTGACCCACTAAAGGGATACAATGTTTGCTCAGTCTCTGCTGAAATGAATATTGCAGTG
ATTCTTGTTATTGAATTGTGTTGTTTATGCAGGCTCGTGATTATGTGTTGTACTTGTCGC
TGCTTGATGTGCTCAGTCGAAATGAGCAGATCCCTCTGGAAGCTTACAGCGAGGTACCAG
AACTAAAAACCCACCCTTTCTCTCATGAGAAATTTCATCATAGATCTGTAGCTTCTTAAT
CCATCATAAATCACAATCACTTTGATCCGTTCTGTTTCGAGTGCAGCTTTCACTTCTTTT
CCGGGATCACGACGATCTGCTGGAAGAGCTAGCGAAGTTCAGACCCCTTCCTACCCCAAG
CACAGTTTATAGCCACAGCTCAGTCTGGCTGCTCTTCTTCCTAATGCCCCTCCTTGTCCT
AAGCATTCTCCTCAAGTGCTTCCTTCTTCAACAGCCAGTTGCAAGCTGAAAAAGATCAAG
CGTGCAATGTCATGTGATATCTCTGTTAAAAGCCAAAGCGTCTTTGTGGCGATGTCTCGC
TGTTTATATTGGAGATATCTCCGTGTACTGATGCAAGGAAGTAGCCTCTTAGCTTGGAAG
AGCGCCAATACATGGTAAAAACAGTATTGTTTTGACTTGCTGAAAAAGAAAAATCACTAT
TC