Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os06t0493801-00
CDS Infomation	cds chromosome:IRGSP-1.0:6:17142218:17144233:-1 gene:Os06g0493801 gene_biotype:protein_coding transcript_biotype:protein_coding description:Hypothetical conserved gene. (Os06t0493801-00)
Sequence	ATGCACGACCACCTCGCCGCCCTCCTCCTCCGCGGCAGCGGCGGGCACCACCACTCGCAC CCGCGCGCCGTCCACGGCGCCGCAGTCAAGCTCGGCTGCCTCGCCTCCACCTACCTCTGC AACAACCTCCTCCTCTCGTACCAGGCCCGCGGCCACCTCGCGGACGCGCGGGGCGTGTTC GACGAAATGCCCCGCCGCAACGTCGTCTCCTGGTCCGTCCTCATCGCGGCCTCCTCCCGC CTCGGCGTCCTCGGGGATGCGCTCTCGCTGTTCGCCGGCATGCTTCGCGGCGGGGAACGC GACCGACCCAACTCGTTCACGGTCGCCGCGCTGGTGGCCGGGTGTGCCCGTGCCAAGGAC GCTGTCGCGGGCGAGCAAGTGCATGCTTCCGCGGTCAAGCTTGGCGTCGACGAGGACGAG AGTGTTGCGGGGACGCTGGTCGACATGTACGCCAAGTGTGGTCGCGTGGGCTCGTCATGG CGGGCGTTTGTGCTCACGCCGCAGAGGAGCGTTCTGAGCTGGACAAGCATGATCGCTTGC CTCGTCAACCATGGGGATTCAGGGTACCGTGACACAGCTATTGTCCTATTCAAGAAGATG CTGGTTTTGAAGGTTTGGCCAACAAATGCTACGTTTTCTTGCATCCTGAAGGTGTTTGAT GTGCCTGAGTTGCTCCCCAGCGGAAAGCAGGTTCACGGCTGCTTGGTGAAGATGGGGACT GAGGTAGATCCTGCGTTAGGAACTGCTCTTTTGGCAATGTATGGTAGATGTGGTGGAATG GATGAGATAACTAGGTTGGCTTGCCGGATAAGGCATGATGCGTTCTCCAGGACTTCGCTG CTTACAGCCTATGCACGTAATGGCTGCAATATGGAGGCGGTTCGAGTTTTCCGGGACATG TTGATGGGTCATATGCCTATTGACCAGTCAGCTATAACTAGCCTGCTGCAGGTTTGTTCA TCACTAGGACAACTTAGAGTGGTCAAGGAGATTCATTGCTATGCTCTAAAGAATTTTTTT AGGTTGGATACATTACTTCTGAATGCTATTGTCACTGTTTATGGCAAATGTGGTGATATA GCAAGTTCAGAGATTGTATTTAATACATTGGAAAACAAGGACACAATATCCTGGACAGCT TTATTAACTTGCTATGTGCAGAATGATCTTTCTCAGGAGGCACTATTCTTCTTTAGGGAA ATGGTTCGAAAGGGGCTAGAATCATCAATATTTTGCATCACAAGTGTGTTACGGGCCTGC TCTGCCACTTCTAGTCTTTCTTGTGGATGGCAAATTCACTCCAGGGTGGTTAAGTTAGGG GTTGATGATGACACCTCTGTGGAGAATGCCCTTGTAACAATGTATGCAAAGTGTGGAGTT GTTCAGGTCGCATTGAAGATTTTTAATTCAATGAGGAATAGGGGTATTATCTCTTGGAAT GCGTTAATCACAAGTTTTTCTCAGCATGGCAATGAGGTGGCAGCCATTCAGCTATTTGAT ATGATGCAAGAAGAAATGGTGTGTCCTGATGATTATACTTTTGTCGGACTATTGTCGTCT TGTAGCCGAATGGGCCTAGTTGCAGAGGGTTGTGAATACTTCAAACAGATGAAGACCAAG TACAATCTGGAGCCCAAGATGGAACATTACACATGCATGGTTGATCTATTTGCCCGTGCT GGAAGATTTTCTGATGCGATGAAATTCATTGATGCCATGCCTTGTCAACCAGACCAACTG GTGTGGGAAGCTTTGCTAGCTTCATGTAGGGTTCACGGTAATTTGGATTTAGGAAGAATG GCAGCAAAGAAGATTCTGGAAATTAAACCAGAGGATCCTTCACCATATATTATATTATCC AGCATTCATGCTTCAATTGATATGTGGGATGAAAAAGCCCGGAATCGAACTTTATTAGAC TTCCAGCAATTGAGGAAGGACGTGGGAAGTAGTCAGCTTGATTCACAAGGATTTTCAGAT GATATATTTAACGCATTACAAGTTGGAGTAACATAA

Peptide Sequence

PEP ID	Os06t0493801-00
PEP Infomation	pep chromosome:IRGSP-1.0:6:17142218:17144233:-1 gene:Os06g0493801 transcript:Os06t0493801-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Hypothetical conserved gene. (Os06t0493801-00)
Sequence	MHDHLAALLLRGSGGHHHSHPRAVHGAAVKLGCLASTYLCNNLLLSYQARGHLADARGVF DEMPRRNVVSWSVLIAASSRLGVLGDALSLFAGMLRGGERDRPNSFTVAALVAGCARAKD AVAGEQVHASAVKLGVDEDESVAGTLVDMYAKCGRVGSSWRAFVLTPQRSVLSWTSMIAC LVNHGDSGYRDTAIVLFKKMLVLKVWPTNATFSCILKVFDVPELLPSGKQVHGCLVKMGT EVDPALGTALLAMYGRCGGMDEITRLACRIRHDAFSRTSLLTAYARNGCNMEAVRVFRDM LMGHMPIDQSAITSLLQVCSSLGQLRVVKEIHCYALKNFFRLDTLLLNAIVTVYGKCGDI ASSEIVFNTLENKDTISWTALLTCYVQNDLSQEALFFFREMVRKGLESSIFCITSVLRAC SATSSLSCGWQIHSRVVKLGVDDDTSVENALVTMYAKCGVVQVALKIFNSMRNRGIISWN ALITSFSQHGNEVAAIQLFDMMQEEMVCPDDYTFVGLLSSCSRMGLVAEGCEYFKQMKTK YNLEPKMEHYTCMVDLFARAGRFSDAMKFIDAMPCQPDQLVWEALLASCRVHGNLDLGRM AAKKILEIKPEDPSPYIILSSIHASIDMWDEKARNRTLLDFQQLRKDVGSSQLDSQGFSD DIFNALQVGVT

Transcript Sequence

Transcript ID	Os06t0493801-00
Transcript Infomation	cdna chromosome:IRGSP-1.0:6:17142218:17144233:-1 gene:Os06g0493801 gene_biotype:protein_coding transcript_biotype:protein_coding description:Hypothetical conserved gene. (Os06t0493801-00)
Sequence	ATGCACGACCACCTCGCCGCCCTCCTCCTCCGCGGCAGCGGCGGGCACCACCACTCGCAC CCGCGCGCCGTCCACGGCGCCGCAGTCAAGCTCGGCTGCCTCGCCTCCACCTACCTCTGC AACAACCTCCTCCTCTCGTACCAGGCCCGCGGCCACCTCGCGGACGCGCGGGGCGTGTTC GACGAAATGCCCCGCCGCAACGTCGTCTCCTGGTCCGTCCTCATCGCGGCCTCCTCCCGC CTCGGCGTCCTCGGGGATGCGCTCTCGCTGTTCGCCGGCATGCTTCGCGGCGGGGAACGC GACCGACCCAACTCGTTCACGGTCGCCGCGCTGGTGGCCGGGTGTGCCCGTGCCAAGGAC GCTGTCGCGGGCGAGCAAGTGCATGCTTCCGCGGTCAAGCTTGGCGTCGACGAGGACGAG AGTGTTGCGGGGACGCTGGTCGACATGTACGCCAAGTGTGGTCGCGTGGGCTCGTCATGG CGGGCGTTTGTGCTCACGCCGCAGAGGAGCGTTCTGAGCTGGACAAGCATGATCGCTTGC CTCGTCAACCATGGGGATTCAGGGTACCGTGACACAGCTATTGTCCTATTCAAGAAGATG CTGGTTTTGAAGGTTTGGCCAACAAATGCTACGTTTTCTTGCATCCTGAAGGTGTTTGAT GTGCCTGAGTTGCTCCCCAGCGGAAAGCAGGTTCACGGCTGCTTGGTGAAGATGGGGACT GAGGTAGATCCTGCGTTAGGAACTGCTCTTTTGGCAATGTATGGTAGATGTGGTGGAATG GATGAGATAACTAGGTTGGCTTGCCGGATAAGGCATGATGCGTTCTCCAGGACTTCGCTG CTTACAGCCTATGCACGTAATGGCTGCAATATGGAGGCGGTTCGAGTTTTCCGGGACATG TTGATGGGTCATATGCCTATTGACCAGTCAGCTATAACTAGCCTGCTGCAGGTTTGTTCA TCACTAGGACAACTTAGAGTGGTCAAGGAGATTCATTGCTATGCTCTAAAGAATTTTTTT AGGTTGGATACATTACTTCTGAATGCTATTGTCACTGTTTATGGCAAATGTGGTGATATA GCAAGTTCAGAGATTGTATTTAATACATTGGAAAACAAGGACACAATATCCTGGACAGCT TTATTAACTTGCTATGTGCAGAATGATCTTTCTCAGGAGGCACTATTCTTCTTTAGGGAA ATGGTTCGAAAGGGGCTAGAATCATCAATATTTTGCATCACAAGTGTGTTACGGGCCTGC TCTGCCACTTCTAGTCTTTCTTGTGGATGGCAAATTCACTCCAGGGTGGTTAAGTTAGGG GTTGATGATGACACCTCTGTGGAGAATGCCCTTGTAACAATGTATGCAAAGTGTGGAGTT GTTCAGGTCGCATTGAAGATTTTTAATTCAATGAGGAATAGGGGTATTATCTCTTGGAAT GCGTTAATCACAAGTTTTTCTCAGCATGGCAATGAGGTGGCAGCCATTCAGCTATTTGAT ATGATGCAAGAAGAAATGGTGTGTCCTGATGATTATACTTTTGTCGGACTATTGTCGTCT TGTAGCCGAATGGGCCTAGTTGCAGAGGGTTGTGAATACTTCAAACAGATGAAGACCAAG TACAATCTGGAGCCCAAGATGGAACATTACACATGCATGGTTGATCTATTTGCCCGTGCT GGAAGATTTTCTGATGCGATGAAATTCATTGATGCCATGCCTTGTCAACCAGACCAACTG GTGTGGGAAGCTTTGCTAGCTTCATGTAGGGTTCACGGTAATTTGGATTTAGGAAGAATG GCAGCAAAGAAGATTCTGGAAATTAAACCAGAGGATCCTTCACCATATATTATATTATCC AGCATTCATGCTTCAATTGATATGTGGGATGAAAAAGCCCGGAATCGAACTTTATTAGAC TTCCAGCAATTGAGGAAGGACGTGGGAAGTAGTCAGCTTGATTCACAAGGATTTTCAGAT GATATATTTAACGCATTACAAGTTGGAGTAACATAA