Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os06t0490400-00
CDS Infomation

cds chromosome:IRGSP-1.0:6:16896478:16897774:1 gene:Os06g0490400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:class III peroxidase 80 description:Similar to Class III peroxidase 80. (Os06t0490400-00)
Sequence

ATGGCGATCACCAAGTGCTGTGTATTGCTGCTTGTTCCGTTGGTCGCCGTGCTCGTAGCG
GCTGATCAGCTCCGCGTCGACTACTACAGCGAGACGTGCCCGAACGTCGAGGCGATCGTC
CGCGAGGAGATGGAGAGGATCATCGCCGCCGCGCCCAGCCTCGCCGGTCCGCTGCTTCGC
CTCCATTTCCATGACTGCTTCGTCAGGGGTTGCGACGCGTCTGTGCTGCTGAGCTCCGCC
GGCGGCAACACGGCGGAGCGGGACGCGAAGCCGAACAAGAGCCTCCGGGGATTCGGCTCC
GTGGAGCGGGTGAAGGCGAGGCTGGAGACGGCGTGCCCGGGCACCGTCTCCTGCGCCGAC
GTGCTCGCGCTCATGGCGCGCGACGCCGTCGTTCTGGCCAGGGGCCCGTCCTGGCCGGTC
ACCCTCGGCAGGAGGGACGGCAGGGCGTCCAGCGCCGGCGAGGCCGCCGCCAGCCTGCCC
CCGGCGGACGGCGACATCCCGACGCTCGCCAGGGTCTTCGCCTCCAACGGCCTCGACCTC
AAGGACCTCGCCGTGCTCTCCGGCGCGCACACCCTCGGCACGGCGCACTGCCCGTCCTAC
GCCGGCCGGCTCTACAACTTCACCGGCAAGGGCGACGCCGACCCGTCGCTGGACGGCGAG
TACGCCGGCAAGCTGAGGACGAGGTGCAGGAGCCTCACCGACGACGGCATGCCGTCGGAG
ATGGACCCCGGCAGCTACAAGACGTTCGACACCAGCTACTACCGCCATGTCGCCAAGCGG
AGGGGGCTCTTCTCCTCCGACGCCTCGCTCCTCACCGACGCCACCACCAGGGGCTACGTG
CAGCGTATCGCCACCGGCAAGTTCGACGACGAGTTCTTCAGGGACTTCGGCGAGTCCATG
ACCAAGATGGGCAACGTCGCCGTGCTCACCGGAGCCGACGGCGAGATCAGGAAGAAGTGC
TACGTCATCAACTAA

Peptide Sequence

PEP ID

Os06t0490400-00
PEP Infomation

pep chromosome:IRGSP-1.0:6:16896478:16897774:1 gene:Os06g0490400 transcript:Os06t0490400-00 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:class III peroxidase 80 description:Similar to Class III peroxidase 80. (Os06t0490400-00)
Sequence

MAITKCCVLLLVPLVAVLVAADQLRVDYYSETCPNVEAIVREEMERIIAAAPSLAGPLLR
LHFHDCFVRGCDASVLLSSAGGNTAERDAKPNKSLRGFGSVERVKARLETACPGTVSCAD
VLALMARDAVVLARGPSWPVTLGRRDGRASSAGEAAASLPPADGDIPTLARVFASNGLDL
KDLAVLSGAHTLGTAHCPSYAGRLYNFTGKGDADPSLDGEYAGKLRTRCRSLTDDGMPSE
MDPGSYKTFDTSYYRHVAKRRGLFSSDASLLTDATTRGYVQRIATGKFDDEFFRDFGESM
TKMGNVAVLTGADGEIRKKCYVIN

Transcript Sequence

Transcript ID

Os06t0490400-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:6:16896478:16897774:1 gene:Os06g0490400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:class III peroxidase 80 description:Similar to Class III peroxidase 80. (Os06t0490400-00)
Sequence

CACTTAATTAATTGGTTGTTAACTGTGCTGTGTGGCCATGGCGATCACCAAGTGCTGTGT
ATTGCTGCTTGTTCCGTTGGTCGCCGTGCTCGTAGCGGCTGATCAGCTCCGCGTCGACTA
CTACAGCGAGACGTGCCCGAACGTCGAGGCGATCGTCCGCGAGGAGATGGAGAGGATCAT
CGCCGCCGCGCCCAGCCTCGCCGGTCCGCTGCTTCGCCTCCATTTCCATGACTGCTTCGT
CAGGGGTTGCGACGCGTCTGTGCTGCTGAGCTCCGCCGGCGGCAACACGGCGGAGCGGGA
CGCGAAGCCGAACAAGAGCCTCCGGGGATTCGGCTCCGTGGAGCGGGTGAAGGCGAGGCT
GGAGACGGCGTGCCCGGGCACCGTCTCCTGCGCCGACGTGCTCGCGCTCATGGCGCGCGA
CGCCGTCGTTCTGGCCAGGGGCCCGTCCTGGCCGGTCACCCTCGGCAGGAGGGACGGCAG
GGCGTCCAGCGCCGGCGAGGCCGCCGCCAGCCTGCCCCCGGCGGACGGCGACATCCCGAC
GCTCGCCAGGGTCTTCGCCTCCAACGGCCTCGACCTCAAGGACCTCGCCGTGCTCTCCGG
CGCGCACACCCTCGGCACGGCGCACTGCCCGTCCTACGCCGGCCGGCTCTACAACTTCAC
CGGCAAGGGCGACGCCGACCCGTCGCTGGACGGCGAGTACGCCGGCAAGCTGAGGACGAG
GTGCAGGAGCCTCACCGACGACGGCATGCCGTCGGAGATGGACCCCGGCAGCTACAAGAC
GTTCGACACCAGCTACTACCGCCATGTCGCCAAGCGGAGGGGGCTCTTCTCCTCCGACGC
CTCGCTCCTCACCGACGCCACCACCAGGGGCTACGTGCAGCGTATCGCCACCGGCAAGTT
CGACGACGAGTTCTTCAGGGACTTCGGCGAGTCCATGACCAAGATGGGCAACGTCGCCGT
GCTCACCGGAGCCGACGGCGAGATCAGGAAGAAGTGCTACGTCATCAACTAATTAACACT
AGCTAAGCTAAAGCTTAATTAATTAGCTGCACTAGATCAGATGCATGATGCATGCGGTAT
GCCCGGCTGTTGTTTATTAATCATTGTATTATATTATTTATTATT