Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os06t0489200-01
CDS Infomation	cds chromosome:IRGSP-1.0:6:16825601:16836194:-1 gene:Os06g0489200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF1604 domain containing protein. (Os06t0489200-01)
Sequence	ATGGGGTTCGACGACGACGACGAGGATCTCGTCGTCTACGGGACGCCGATCGAGCGGGAG GAGGACACCTCCGCACGCAAGCGCCGGGCCGTCGCCGAGGCCGGCCAGCTCCGCGCCCTC CCCGCCTGGAAGCAGGAGGTGAGAGATGAGGAAGGGCGAAGAAGGTTTCATGGTGCATTT ACGGGAGGTTTCTCAGCTGGTTATTACAATACCGTTGGCACAAAAGAGGGATGGACTCCA CAGACTTTTACATCGTCACGGAAAAATAGGGCTGAGATGAAAAAGCAAAGCATATACAGT TTTCTCGATGAGGAAGACATAAAGGATATGGGAGGTAATGCCTTGGAAACATCTCAGCAG TATGATACATTTGGTTTTACAGCTACAGAACATGCCCGAAAGCAAGCTTCCAAGGAGCAG AAAGAGAGACCATCGGCTATACCTGGGCCTATTCCTGATGAGCTGGTGGTCCCTGCTACT ACTTCTATTGGAGTGAAGTTATTGATGAAAATGGGCTGGCGCCAAGGTCGTTCAATTAGA GATGCACATGCTGACTCCTTATACGAATCGCGCAGGGAAGCAAGAAAAGCCTTCCTTGCA CTCTCTGGTACAAAAACTGGTGGTCAAAAAATACAAGTTGATTCACACAAGTCTGATAAG GATGATGGTGCCACAGAATCATTTGAGGAGTTACATGCCTCTGGAAATACCCCTGTATAC GTTCTTCATCCCAAGCAGGACTTGCATGGGTTAGGTTTTGACCCATTCAAGCATGCTCCT GAGTTTAAAGATAGGAAAAGATTGCAGAAGTCAGCGAGGGACCGTAATAGAAGTGATGTT TCAATGAGGGGGAGTCTTCTGATTTCAAACTCAGGACAATATGCTCCTGGCTTTGGGATT GGAGCACTTGAGGAGCTAGGTGTTGAAGATGAGGATATTTATGCATCAGGTTTTGCTTAT GAACAAATGGAAGTTGATATTGAGCCTTCAAAAACAGCCAGCGATAGTAATTATAAACTT GAAGACAGGAAAAGAGGTGTCTTCCTGGCTTTTAAAATCGCCTCAAGTTCTGAGTACAAG CTTGAAAGATTTGATCCTCCTGAGATCCCATCTGATTTTGATGGTCGCCACAAGTTTCTA ACTCCACGACAGGATGTTAATAACCTTTCTGATCTGGCTCCTCCTGAGGTTCCTGCTCCA GAAGATACTAGCTTGAGATTATTGATTGAGGGTTGTGCCGCTATGGTTGCTCGTTGTGGG AAACATATTGAGGATTTTTACAAAGAGAAAAGCAAAACAAATACACAGTTTAATTTCCTC AATGAAGGAGATGGCTGTAGCTACTATGCAAGGAAGTTATGGGAGTATCAGCAGAAATAT ATTGACCAGCAAAAGCCTGATACTGTGCAATCCAAGTCTTCTGACAAGTTGACTGCTGAA AATCGTGGAAAGATTCTTGGTGAAAGGCCCCTTGATAGAAGCACTAAATCATCTAGCTCA TCCTTCCCTGCAAAGGAAGCAATTCAACTGCAGTCCAATCTGGCTGACAACTTTGTGAAG CCAATATCTCTTGACGGCCTACCAGAGTATGAAAAGCCTTTCAGAAATGATCCTGCAAAG CAAGCAAGGTTTGAGCAATTTCTTAAGGATAAATACCAAGGAGGCCTTCGCCCTGCAAAT CTTATACCTACAAGTACTATGTCAGATGTTGACCGTGCCCGGGAAAGACTAGATTTTGAG GCTGCTGCTGAGACAATTGAAAAGGGCAAGGAAAAAAAGGCTATGGATCCTTTATCATTG TTGGGTTTATCTGGAATAAATGAGCAACGTTTTGTATCATCTACTGAATCAGAGAGATCT ATACCTGCACGAGATGAGAAATCAATTTATCCACGAAGGGAGGAATTTGAATGGCGACCA TCACCAATACTGTGCAAGCGTTTTGACATAGTTGATCCTTTCATGGGAAAGCCATTTCAT GTTCAAAGGCCAAGAAGTAAGATGGACAGCCTTATCTTCATGTCAGAATCCACCACGAGG ACAAACGAAGTGGAAAGTTCGAGTATTGCTCCACAGCATACTTCTGTGGCAGGAGCAACA GAGACAGAAGCAAAGGGAGCTGCGACTGACCCTGAAATTGAGTCCAGCAGTGTGCAGAGA CCTGTTGATCTTTACAAGGCTATCTTTTCTGATGATTCAGATGATGATATGGCTGAACCT CTTGCTAATCAACCAGTGGATCCAGTAAAGACCAGTGAAGATGCCAATATGGTTCTCAAT CGTCTTGTTGCTGAGGATTTCCTAGAATCATTGGGTAAAGAACTGGGGTTGGATGTTCCA CCAGAAAAGCCCACACCACCCAATGTCTTATTTAGATCAGAAACACCTTCAACAGCTAAT GCAATTGGCATATCTAGAAACAGAAAGGCAATTACTTGTCAGGAAATAAAGGAGAACGAG AGTGCTCTTGACAAGGAGGAAATTGCCAATGCCAGTGCAGATGTTCCATCAGATAATGTT GAAGAGCTTGGTTTGAAATATGAGAAGCAGGAGCATAGAGCTGAGAAAAGCAGGTCACGC TCTTCGCACCGTCAAACCCAAAGTGGTAGTCTAGATTCAGATTCGACCTCTGATCAGCAT AGGAGTAGGGAGAGAAGATCACGCCATAAAATTCGAAGTGGAACTCCAGGTTCTGATTCT TCTATTGAGCATCATAGGAGTAAGAAAAGAAAGTCACATTCAAAGCATAGAACACGCAGG AGTAGAAGTCCTTATGCTGATTCCAGTGACAGCCAATATACTAAGAGGAAACACCGTGAG AAAAGGCATCACCGGACTCGCAATCCTGATACTGATTCTAGTGATCATGAATATGAGGAA AGACATAAATCCAGTAGTCGAAGATCATCTGATAAAGACAGATCCAGAAGGCGTTCTAGA CACCACAAACGTTGA

Peptide Sequence

PEP ID	Os06t0489200-01
PEP Infomation	pep chromosome:IRGSP-1.0:6:16825601:16836194:-1 gene:Os06g0489200 transcript:Os06t0489200-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF1604 domain containing protein. (Os06t0489200-01)
Sequence	MGFDDDDEDLVVYGTPIEREEDTSARKRRAVAEAGQLRALPAWKQEVRDEEGRRRFHGAF TGGFSAGYYNTVGTKEGWTPQTFTSSRKNRAEMKKQSIYSFLDEEDIKDMGGNALETSQQ YDTFGFTATEHARKQASKEQKERPSAIPGPIPDELVVPATTSIGVKLLMKMGWRQGRSIR DAHADSLYESRREARKAFLALSGTKTGGQKIQVDSHKSDKDDGATESFEELHASGNTPVY VLHPKQDLHGLGFDPFKHAPEFKDRKRLQKSARDRNRSDVSMRGSLLISNSGQYAPGFGI GALEELGVEDEDIYASGFAYEQMEVDIEPSKTASDSNYKLEDRKRGVFLAFKIASSSEYK LERFDPPEIPSDFDGRHKFLTPRQDVNNLSDLAPPEVPAPEDTSLRLLIEGCAAMVARCG KHIEDFYKEKSKTNTQFNFLNEGDGCSYYARKLWEYQQKYIDQQKPDTVQSKSSDKLTAE NRGKILGERPLDRSTKSSSSSFPAKEAIQLQSNLADNFVKPISLDGLPEYEKPFRNDPAK QARFEQFLKDKYQGGLRPANLIPTSTMSDVDRARERLDFEAAAETIEKGKEKKAMDPLSL LGLSGINEQRFVSSTESERSIPARDEKSIYPRREEFEWRPSPILCKRFDIVDPFMGKPFH VQRPRSKMDSLIFMSESTTRTNEVESSSIAPQHTSVAGATETEAKGAATDPEIESSSVQR PVDLYKAIFSDDSDDDMAEPLANQPVDPVKTSEDANMVLNRLVAEDFLESLGKELGLDVP PEKPTPPNVLFRSETPSTANAIGISRNRKAITCQEIKENESALDKEEIANASADVPSDNV EELGLKYEKQEHRAEKSRSRSSHRQTQSGSLDSDSTSDQHRSRERRSRHKIRSGTPGSDS SIEHHRSKKRKSHSKHRTRRSRSPYADSSDSQYTKRKHREKRHHRTRNPDTDSSDHEYEE RHKSSSRRSSDKDRSRRRSRHHKR

Transcript Sequence

Transcript ID	Os06t0489200-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:6:16825601:16836194:-1 gene:Os06g0489200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF1604 domain containing protein. (Os06t0489200-01)
Sequence	GCCGTCCCACTTTCCAGAAACACCCTCCACCCCCCACCTCACCGGCCCCTCCGCGCCGCC CGCACCCGGCGCGGCGAGCTAGGTCTTCCCGTCGCCGGGCCGGCGTTCCCACCACCCGGC CGCCACCATGGGGTTCGACGACGACGACGAGGATCTCGTCGTCTACGGGACGCCGATCGA GCGGGAGGAGGACACCTCCGCACGCAAGCGCCGGGCCGTCGCCGAGGCCGGCCAGCTCCG CGCCCTCCCCGCCTGGAAGCAGGAGGTGAGAGATGAGGAAGGGCGAAGAAGGTTTCATGG TGCATTTACGGGAGGTTTCTCAGCTGGTTATTACAATACCGTTGGCACAAAAGAGGGATG GACTCCACAGACTTTTACATCGTCACGGAAAAATAGGGCTGAGATGAAAAAGCAAAGCAT ATACAGTTTTCTCGATGAGGAAGACATAAAGGATATGGGAGGTAATGCCTTGGAAACATC TCAGCAGTATGATACATTTGGTTTTACAGCTACAGAACATGCCCGAAAGCAAGCTTCCAA GGAGCAGAAAGAGAGACCATCGGCTATACCTGGGCCTATTCCTGATGAGCTGGTGGTCCC TGCTACTACTTCTATTGGAGTGAAGTTATTGATGAAAATGGGCTGGCGCCAAGGTCGTTC AATTAGAGATGCACATGCTGACTCCTTATACGAATCGCGCAGGGAAGCAAGAAAAGCCTT CCTTGCACTCTCTGGTACAAAAACTGGTGGTCAAAAAATACAAGTTGATTCACACAAGTC TGATAAGGATGATGGTGCCACAGAATCATTTGAGGAGTTACATGCCTCTGGAAATACCCC TGTATACGTTCTTCATCCCAAGCAGGACTTGCATGGGTTAGGTTTTGACCCATTCAAGCA TGCTCCTGAGTTTAAAGATAGGAAAAGATTGCAGAAGTCAGCGAGGGACCGTAATAGAAG TGATGTTTCAATGAGGGGGAGTCTTCTGATTTCAAACTCAGGACAATATGCTCCTGGCTT TGGGATTGGAGCACTTGAGGAGCTAGGTGTTGAAGATGAGGATATTTATGCATCAGGTTT TGCTTATGAACAAATGGAAGTTGATATTGAGCCTTCAAAAACAGCCAGCGATAGTAATTA TAAACTTGAAGACAGGAAAAGAGGTGTCTTCCTGGCTTTTAAAATCGCCTCAAGTTCTGA GTACAAGCTTGAAAGATTTGATCCTCCTGAGATCCCATCTGATTTTGATGGTCGCCACAA GTTTCTAACTCCACGACAGGATGTTAATAACCTTTCTGATCTGGCTCCTCCTGAGGTTCC TGCTCCAGAAGATACTAGCTTGAGATTATTGATTGAGGGTTGTGCCGCTATGGTTGCTCG TTGTGGGAAACATATTGAGGATTTTTACAAAGAGAAAAGCAAAACAAATACACAGTTTAA TTTCCTCAATGAAGGAGATGGCTGTAGCTACTATGCAAGGAAGTTATGGGAGTATCAGCA GAAATATATTGACCAGCAAAAGCCTGATACTGTGCAATCCAAGTCTTCTGACAAGTTGAC TGCTGAAAATCGTGGAAAGATTCTTGGTGAAAGGCCCCTTGATAGAAGCACTAAATCATC TAGCTCATCCTTCCCTGCAAAGGAAGCAATTCAACTGCAGTCCAATCTGGCTGACAACTT TGTGAAGCCAATATCTCTTGACGGCCTACCAGAGTATGAAAAGCCTTTCAGAAATGATCC TGCAAAGCAAGCAAGGTTTGAGCAATTTCTTAAGGATAAATACCAAGGAGGCCTTCGCCC TGCAAATCTTATACCTACAAGTACTATGTCAGATGTTGACCGTGCCCGGGAAAGACTAGA TTTTGAGGCTGCTGCTGAGACAATTGAAAAGGGCAAGGAAAAAAAGGCTATGGATCCTTT ATCATTGTTGGGTTTATCTGGAATAAATGAGCAACGTTTTGTATCATCTACTGAATCAGA GAGATCTATACCTGCACGAGATGAGAAATCAATTTATCCACGAAGGGAGGAATTTGAATG GCGACCATCACCAATACTGTGCAAGCGTTTTGACATAGTTGATCCTTTCATGGGAAAGCC ATTTCATGTTCAAAGGCCAAGAAGTAAGATGGACAGCCTTATCTTCATGTCAGAATCCAC CACGAGGACAAACGAAGTGGAAAGTTCGAGTATTGCTCCACAGCATACTTCTGTGGCAGG AGCAACAGAGACAGAAGCAAAGGGAGCTGCGACTGACCCTGAAATTGAGTCCAGCAGTGT GCAGAGACCTGTTGATCTTTACAAGGCTATCTTTTCTGATGATTCAGATGATGATATGGC TGAACCTCTTGCTAATCAACCAGTGGATCCAGTAAAGACCAGTGAAGATGCCAATATGGT TCTCAATCGTCTTGTTGCTGAGGATTTCCTAGAATCATTGGGTAAAGAACTGGGGTTGGA TGTTCCACCAGAAAAGCCCACACCACCCAATGTCTTATTTAGATCAGAAACACCTTCAAC AGCTAATGCAATTGGCATATCTAGAAACAGAAAGGCAATTACTTGTCAGGAAATAAAGGA GAACGAGAGTGCTCTTGACAAGGAGGAAATTGCCAATGCCAGTGCAGATGTTCCATCAGA TAATGTTGAAGAGCTTGGTTTGAAATATGAGAAGCAGGAGCATAGAGCTGAGAAAAGCAG GTCACGCTCTTCGCACCGTCAAACCCAAAGTGGTAGTCTAGATTCAGATTCGACCTCTGA TCAGCATAGGAGTAGGGAGAGAAGATCACGCCATAAAATTCGAAGTGGAACTCCAGGTTC TGATTCTTCTATTGAGCATCATAGGAGTAAGAAAAGAAAGTCACATTCAAAGCATAGAAC ACGCAGGAGTAGAAGTCCTTATGCTGATTCCAGTGACAGCCAATATACTAAGAGGAAACA CCGTGAGAAAAGGCATCACCGGACTCGCAATCCTGATACTGATTCTAGTGATCATGAATA TGAGGAAAGACATAAATCCAGTAGTCGAAGATCATCTGATAAAGACAGATCCAGAAGGCG TTCTAGACACCACAAACGTTGAGGAAAAGATTCCACAAAGCATTCATTAGTGATAGCTAC AAGAAGTTTTGAGGGAAAAATCAGTGAAGAGAAATCCCCAATCAAGGAAATTCTGGTAAA CTATTTCAGGACACACATATGGTGACTGTTGAGGCAGATATTCTTATTAAGTGCTTTACA CAATTTTTTTCTTAATTAGTTTGCTGTCCTGTAATCCTTGGGTGCAACCATTTTTTCTTT TCTGCAATGTACTGCATAGTGCCCCATGTTCACAACATTTAATTGAGTCAGTGGGTTCTG TACATACATGTGCAATCATAGACTATTAGACATACTAGGATCTTCTCTCTATTAATCTAC AGGATGTAGTGTTGCTGCAGTTAGTAGGATTTGTAACCGCCCTATTTATGTAACAAACTT TTTTCTCCTTAATTAATTTGCATATTCTCCAAGAAGGAAAAACTATAGGATGGATGCTTA TGGAAAGATTGTGTTTTGCTGG