Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os06t0484500-01
CDS Infomation

cds chromosome:IRGSP-1.0:6:16504514:16505330:1 gene:Os06g0484500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os06t0484500-01)
Sequence

CAAGTGCTGGTGCGCCCGCCGCGCTCGCCCCGAGAGGACCCTATGGCGACGCAGCTCTCC
GCCACCTTCGCCCCTGCCGCGACCACCACCGCCACGCCCCTCCCGGCGCCGCAGCAGCGG
CTCCGGCACGGCCGCCGCTGCTACCACGCGCTGTCGCTGCGCCCTCCCCGCGCGGCGTCC
GGCGATGACGGCGCCGGCGGCGAGGTGGAGCCCGCTGCCCCGGCGGCGCCCGCCAAGACG
GCCACCGCCACGGACGACGGCGGCGACGACTTCGAGGAGCGCGTCCTGCGCATCAAGTCC
CGCGTCGGGCCCAAGAAGCGAGGCAGCGCCGCGGCGCGGAAGAGGAAGGGCGGCGCCGGG
GCGTCGTCCAAGTCCAAGGCTGCCGTGACGCTCCCGCCCGTGCCGCTGCGGGAGGCCCGG
TCTTCCGTGGGCGTGCCCGTTGAGTTCGGGTTCAGCGCGTACAGCGAGAGGCTCAACGGC
GCGCTCGCGGCGGTCGGCCTGGCGGCGCTGCTGCTCGTGGAGCTCGGCTCCGGGAAGGCG
CTCGTCAAGTACCACCAGCCGGCCACGCTGTTCCTCCAGGTGTACACCGTCGCCGCGGCG
GGCGCCGTGTTCGTCAAGTACGAGAAGGAGCGGATCAGCGTGTGGCCCGGGCCGCCGGCG
ACCAAGCCGCCGGCTACCGGTGAATGA

Peptide Sequence

PEP ID

Os06t0484500-01
PEP Infomation

pep chromosome:IRGSP-1.0:6:16504514:16505330:1 gene:Os06g0484500 transcript:Os06t0484500-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os06t0484500-01)
Sequence

QVLVRPPRSPREDPMATQLSATFAPAATTTATPLPAPQQRLRHGRRCYHALSLRPPRAAS
GDDGAGGEVEPAAPAAPAKTATATDDGGDDFEERVLRIKSRVGPKKRGSAAARKRKGGAG
ASSKSKAAVTLPPVPLREARSSVGVPVEFGFSAYSERLNGALAAVGLAALLLVELGSGKA
LVKYHQPATLFLQVYTVAAAGAVFVKYEKERISVWPGPPATKPPATGE

Transcript Sequence

Transcript ID

Os06t0484500-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:6:16504514:16505330:1 gene:Os06g0484500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os06t0484500-01)
Sequence

ATCAAGTGCTGGTGCGCCCGCCGCGCTCGCCCCGAGAGGACCCTATGGCGACGCAGCTCT
CCGCCACCTTCGCCCCTGCCGCGACCACCACCGCCACGCCCCTCCCGGCGCCGCAGCAGC
GGCTCCGGCACGGCCGCCGCTGCTACCACGCGCTGTCGCTGCGCCCTCCCCGCGCGGCGT
CCGGCGATGACGGCGCCGGCGGCGAGGTGGAGCCCGCTGCCCCGGCGGCGCCCGCCAAGA
CGGCCACCGCCACGGACGACGGCGGCGACGACTTCGAGGAGCGCGTCCTGCGCATCAAGT
CCCGCGTCGGGCCCAAGAAGCGAGGCAGCGCCGCGGCGCGGAAGAGGAAGGGCGGCGCCG
GGGCGTCGTCCAAGTCCAAGGCTGCCGTGACGCTCCCGCCCGTGCCGCTGCGGGAGGCCC
GGTCTTCCGTGGGCGTGCCCGTTGAGTTCGGGTTCAGCGCGTACAGCGAGAGGCTCAACG
GCGCGCTCGCGGCGGTCGGCCTGGCGGCGCTGCTGCTCGTGGAGCTCGGCTCCGGGAAGG
CGCTCGTCAAGTACCACCAGCCGGCCACGCTGTTCCTCCAGGTGTACACCGTCGCCGCGG
CGGGCGCCGTGTTCGTCAAGTACGAGAAGGAGCGGATCAGCGTGTGGCCCGGGCCGCCGG
CGACCAAGCCGCCGGCTACCGGTGAATGATTGGCACATGGGGGTTTCTATTTGACTTTTT
TGTAGGATATGCTTCTTTTTTTGTAATTTACCCATATACCTCGTTGAGTTACTGTACTTT
ATCGACAAATTGTGTTGTGAAATATTGAAATTCGGTT