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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os06t0482200-01
CDS Infomation

cds chromosome:IRGSP-1.0:6:16363402:16366454:-1 gene:Os06g0482200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Thioredoxin fold domain containing protein. (Os06t0482200-01)
Sequence

ATGGCGGACGGTTCGTTTCTTGATCGGATGGTGTCTCAACTTCGGTCGACGTGCAGGTAC
TACACTGGATATCCCAAGGATCTAGGGCCATCAAGAATTATACCGTTCACGTCAGAGCGT
CAATTCGTGCAGCTGTTGCATGAAGGCCGTCCAGTAGTTGTTGCCTTTACTATTAAGTGC
ACTTATACTCAACACCTTGATAAGGTACTGGAGGAAGCTGCTGCTACATTTCATCCGCAT
GTAAAGTTTGTTCGAGTTGAATGCCCAAAGTATCCTGGATTTTGCCTCACAAGGCAAAAG
AATGAGTATCCGTTTATTGAAGTATTTTACAACCCAGAACAGGCTGCTAGCCCAGGAAAG
GTGGTGGACCCTAATGTCACGAAGTACTCGGTGAAAGTTCTCCCTTTCAACTATGACCAG
AGCATGTATGGATTCCGGGAATATTTTAAGAAGCACGGATTCAAGTATTTTGAAACAAAC
TAG

Peptide Sequence

PEP ID

Os06t0482200-01
PEP Infomation

pep chromosome:IRGSP-1.0:6:16363402:16366454:-1 gene:Os06g0482200 transcript:Os06t0482200-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Thioredoxin fold domain containing protein. (Os06t0482200-01)
Sequence

MADGSFLDRMVSQLRSTCRYYTGYPKDLGPSRIIPFTSERQFVQLLHEGRPVVVAFTIKC
TYTQHLDKVLEEAAATFHPHVKFVRVECPKYPGFCLTRQKNEYPFIEVFYNPEQAASPGK
VVDPNVTKYSVKVLPFNYDQSMYGFREYFKKHGFKYFETN

Transcript Sequence

Transcript ID

Os06t0482200-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:6:16363402:16366454:-1 gene:Os06g0482200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Thioredoxin fold domain containing protein. (Os06t0482200-01)
Sequence

CCTCCTAGTTCGCCGCCGGAGCCCGGAAGCTAGCGCCTCGTCGACTTGGGCGGCGGCTGA
AGTCAGTGGCCGAAGGAGCGGGGATTACTTGCCCGCCTCGAAGGCTCTCCGCCGGCGGGC
AGGCGGGATAGCGCGGCAGCGGCCCACGCCGGCAGATCAGGTGGGGAGAGAAGCTCCGCC
GTCCGTGCCTGCGCCGGTTTCCACGAGAGCGGCGTCGCCTGTGTCCTGCTGCTGCTACCT
TTGCTGCCGCATCCTCGCCGCTCTGCATCGGTGGACGTCTGGGATGGCGGACGGTTCGTT
TCTTGATCGGATGGTGTCTCAACTTCGGTCGACGTGCAGGTACTACACTGGATATCCCAA
GGATCTAGGGCCATCAAGAATTATACCGTTCACGTCAGAGCGTCAATTCGTGCAGCTGTT
GCATGAAGGCCGTCCAGTAGTTGTTGCCTTTACTATTAAGTGCACTTATACTCAACACCT
TGATAAGGTACTGGAGGAAGCTGCTGCTACATTTCATCCGCATGTAAAGTTTGTTCGAGT
TGAATGCCCAAAGTATCCTGGATTTTGCCTCACAAGGCAAAAGAATGAGTATCCGTTTAT
TGAAGTATTTTACAACCCAGAACAGGCTGCTAGCCCAGGAAAGGTGGTGGACCCTAATGT
CACGAAGTACTCGGTGAAAGTTCTCCCTTTCAACTATGACCAGAGCATGTATGGATTCCG
GGAATATTTTAAGAAGCACGGATTCAAGTATTTTGAAACAAACTAGGTCAACTATTGAAA
ATCGTTGTGATGAAACATGCATAGTTAGTTAACATACTATGAATGTACGTGAATGCACGT
TCAGCCTGTACTAGAATACTTTTGTTCAAAGCCTTTCTGTATGTGGCATTATCTTAAAAT
GCTTGCT