Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os06t0478600-03
CDS Infomation	cds chromosome:IRGSP-1.0:6:16198320:16200060:1 gene:Os06g0478600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Leucine-rich repeat, N-terminal domain containing protein. (Os06t0478600-01);Leucine-rich repeat, N-terminal domain containing protein. (Os06t0478600-03)
Sequence	ATGGCGCTGCCTCCTCCTCTGCTCCGCTTCTTCATCGTCGCCGTGCTGCTCAGCTCGGTC GCCGCATGGGTGGCGGCGGCGACGACGCTGCACGAGCGCGACGCGGCGGCGCTCAGGGAC GTCCGGGCGGGGCTGCGGGACCTGCCGGGGTCCCGGTTCTTCGAATCCTGGGATGACGCC ACCGACCCGTGCGACTATGCCGGCGTCGTGTGCGAGCCCGACGAGGACGACCCGGCCGCG CTCCGCGTGTCCGTGCTGACGCTCGGCACCGGCCTCACCGACTCTCCCGGCCTGGCTGGC ACGCTCCCGGCCTCGCTTGCCAGCCTCACTGCGCTCACGGACTTCGTCCTTTATCCAGGA CGCGTCGCGGGAGCTATTCCGACGGACATTGGGTCGGGTCTCCGGCGCCTCAGGCTGCTG TCCATGTCCGGCAACCAGCTGACCGGGCAGATACCCGAGTCCCTCGCCGGGCTGCCAGAT CTGCACACGCTCGACCTCGGCAATAACCACCTCGACGGCTCCATTCCCAGCGGCTTGCTG CTGCCGTCTTCGCAGAGCCTCAAGGTGCTCATCCTAGCGAACAATGGCGGCCTCTCCGGG CAGATTCCAGACCAATTTTCCAGCTCACAGCTTTTCCATGTCGACCTAAGCCGGAATTCC ATCACTGGCTCGCTCCCACCGCTGGCGCAGACAGTCCGCTACTTCTCCGTCGCGGCGAAC TCAATGCAGGGGAGCCTCGACGGCGCGTTCGGCAACGGTTCGGCTCCGACCGACTTGGCC TTCCTCGACCTCTCGATGAACAACTTCTCGGGTTCAATCCCGCGGGAGTTGTTCGCGCTC CCGAGCGCGTCGTCCCTTCTTCTGTCCCGCAATAACTTCACCGGGTCCCTCGCCGTGCCA GCGTTCGCATCGGAGCGTGCCGCAACGCCGCCGTGGTCGGTTGTGGACGTCAGCCACAAT GGCATCACGGGGGAGGTCCCGGAGGAGCTAGCGGCCGTGGAGAGCCTGTACGTGAACAAC AACCGGATGTACGGCGAGGTGCCGGAGGCGGTGGCCCGTAGCGTGTTCGCCGGCCGCATG ACGACCTTCTACGCGCAGCACAACTTCCTGACGGGCTTCCCGGTGCCGCCGCTGCCGCTG CCGGACTCCGCAGCGCTGTGCCTCTCTTACAATTGCATGGAGCTACCGTCCGCTTCTGCC GCCAACGGGTGCCCCACCATCGGCGGCCCAATGGAGTCCAGGCCCGCCGACCAGTGCCGG AGCAGCACCGCAGCCAACGCCGGCAGCAGCGGAGGGGACGGCTGA

Peptide Sequence

PEP ID	Os06t0478600-03
PEP Infomation	pep chromosome:IRGSP-1.0:6:16198320:16200060:1 gene:Os06g0478600 transcript:Os06t0478600-03 gene_biotype:protein_coding transcript_biotype:protein_coding description:Leucine-rich repeat, N-terminal domain containing protein. (Os06t0478600-01);Leucine-rich repeat, N-terminal domain containing protein. (Os06t0478600-03)
Sequence	MALPPPLLRFFIVAVLLSSVAAWVAAATTLHERDAAALRDVRAGLRDLPGSRFFESWDDA TDPCDYAGVVCEPDEDDPAALRVSVLTLGTGLTDSPGLAGTLPASLASLTALTDFVLYPG RVAGAIPTDIGSGLRRLRLLSMSGNQLTGQIPESLAGLPDLHTLDLGNNHLDGSIPSGLL LPSSQSLKVLILANNGGLSGQIPDQFSSSQLFHVDLSRNSITGSLPPLAQTVRYFSVAAN SMQGSLDGAFGNGSAPTDLAFLDLSMNNFSGSIPRELFALPSASSLLLSRNNFTGSLAVP AFASERAATPPWSVVDVSHNGITGEVPEELAAVESLYVNNNRMYGEVPEAVARSVFAGRM TTFYAQHNFLTGFPVPPLPLPDSAALCLSYNCMELPSASAANGCPTIGGPMESRPADQCR SSTAANAGSSGGDG

Transcript Sequence

Transcript ID	Os06t0478600-03
Transcript Infomation	cdna chromosome:IRGSP-1.0:6:16198320:16200060:1 gene:Os06g0478600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Leucine-rich repeat, N-terminal domain containing protein. (Os06t0478600-01);Leucine-rich repeat, N-terminal domain containing protein. (Os06t0478600-03)
Sequence	GAAGTAGCTTGTCCTCTTCGCCGAGGCCGAGGTGACGCACATGGCGCTGCCTCCTCCTCT GCTCCGCTTCTTCATCGTCGCCGTGCTGCTCAGCTCGGTCGCCGCATGGGTGGCGGCGGC GACGACGCTGCACGAGCGCGACGCGGCGGCGCTCAGGGACGTCCGGGCGGGGCTGCGGGA CCTGCCGGGGTCCCGGTTCTTCGAATCCTGGGATGACGCCACCGACCCGTGCGACTATGC CGGCGTCGTGTGCGAGCCCGACGAGGACGACCCGGCCGCGCTCCGCGTGTCCGTGCTGAC GCTCGGCACCGGCCTCACCGACTCTCCCGGCCTGGCTGGCACGCTCCCGGCCTCGCTTGC CAGCCTCACTGCGCTCACGGACTTCGTCCTTTATCCAGGACGCGTCGCGGGAGCTATTCC GACGGACATTGGGTCGGGTCTCCGGCGCCTCAGGCTGCTGTCCATGTCCGGCAACCAGCT GACCGGGCAGATACCCGAGTCCCTCGCCGGGCTGCCAGATCTGCACACGCTCGACCTCGG CAATAACCACCTCGACGGCTCCATTCCCAGCGGCTTGCTGCTGCCGTCTTCGCAGAGCCT CAAGGTGCTCATCCTAGCGAACAATGGCGGCCTCTCCGGGCAGATTCCAGACCAATTTTC CAGCTCACAGCTTTTCCATGTCGACCTAAGCCGGAATTCCATCACTGGCTCGCTCCCACC GCTGGCGCAGACAGTCCGCTACTTCTCCGTCGCGGCGAACTCAATGCAGGGGAGCCTCGA CGGCGCGTTCGGCAACGGTTCGGCTCCGACCGACTTGGCCTTCCTCGACCTCTCGATGAA CAACTTCTCGGGTTCAATCCCGCGGGAGTTGTTCGCGCTCCCGAGCGCGTCGTCCCTTCT TCTGTCCCGCAATAACTTCACCGGGTCCCTCGCCGTGCCAGCGTTCGCATCGGAGCGTGC CGCAACGCCGCCGTGGTCGGTTGTGGACGTCAGCCACAATGGCATCACGGGGGAGGTCCC GGAGGAGCTAGCGGCCGTGGAGAGCCTGTACGTGAACAACAACCGGATGTACGGCGAGGT GCCGGAGGCGGTGGCCCGTAGCGTGTTCGCCGGCCGCATGACGACCTTCTACGCGCAGCA CAACTTCCTGACGGGCTTCCCGGTGCCGCCGCTGCCGCTGCCGGACTCCGCAGCGCTGTG CCTCTCTTACAATTGCATGGAGCTACCGTCCGCTTCTGCCGCCAACGGGTGCCCCACCAT CGGCGGCCCAATGGAGTCCAGGCCCGCCGACCAGTGCCGGAGCAGCACCGCAGCCAACGC CGGCAGCAGCGGAGGGGACGGCTGAGCCGCCAACATTCCTCAAGGCTGACAGGTGGGGCC CACCTGGTTCAGCTCATCAGCTGGGCACGGGTGGGGGCGTGAGGAAGGGACGGCCAGGAT AGCTAAGCCTGGCTCACACATTTTCGTTTTGTCCGTTTGTTTCGGGTGTGGTTTTCATGT GATTGGGTTTGAATTCATCGGCATCCGGGCTTGTCGTCGGGCGCGCAACGGTTACACGGC TACAAGGTTAGCGCGTTCTTGTGCGTGTGTGCAATTACTCGCTCTGGTAGTTTGTACGCT GCGTCTGTGTTACTCTGTTCATTGTGAGTAGCTGGCAGTGTCCATTTAAACAACTCTGTT CATACTCTACTAAGTCAGCTAATGTAAAGGGAGGCACTATTTTAGGGGGTGTTTATTTTT T