Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os06t0476200-01
CDS Infomation	cds chromosome:IRGSP-1.0:6:16011333:16032779:1 gene:Os06g0476200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Phosphoglucomutase precursor (EC 5.4.2.2). (Os06t0476200-01);Similar to predicted protein. (Os06t0476200-02)
Sequence	ATGGCTGCTACTATCCCCGCTTCTCCGGCCACTCTGCAGCCATGCAAGAAAAACGTGAGC GGCAGCATGCTCATCCGGTCGCCTCCGCGCCCTTGGAGGAGGAGGCTCCCCCAGCACGTT GTAATAGTTGATGCGAGCTCATCGTCTCGTGGCCCGAAGGCAGCGACGGGTGGCCGGCTC GAGACGTCGACTGACGCTGCAGCGGTGGCCGGGGAGGATGGAGACGTGATCCGGAGGCTG CAGAACGGACCGGACGTGCGTGGCGTTGCGCTGGAAGGGGAGAACGGCCGGGCCGTGGAC CTCACGCCGCTGGCGGTCGAGGTGATCGCCGAGAGCTTCGGGGAGTGGCTGCGGGAGGAG CTCCAGCAGCTGGAGAGCGGGAGGGACGGCGGCGAGGTGCGGGTGTCCGTCGGAAGGGAC CCCCGCCTGTCTGGCGCGCGGCTCGGCGCAGCACTGTTCGCGGGGCTGGCGAGGGCAGGG TGTTCCGTGTTCGACGTGGGGCTCGCCACCACGCCGGCTTGCTTCATGAGCACCAAGCTC CCACGGTTCAGCTATGACGCCTCCATCATGATGACTGCATCACATCTCCCATACACTCGC AACGGCCTCAAGTTCTTCATGAAGCGCGGTGGTCTCACGTCCGGCGAGGTGGAAGGGGTC TGCGACCGTGCGGCGCGGAAGTACGTGGCCAGGAAGATGGGCCTTGGCGGCGGGCGAGGC ATGCCGCCGGTGGTGATGCGCGTCGACTTGATGAGCGCCTATGCGCAGCACCTCCGCAAC ATAATCAAGGAGCGTGTTGCCCACCCGACACACTACGACACCCCCCTAAAGGGCTTCAAG GTGATCGTGAATGCCGGCAACGGCTGCGGAGGGTTCTTCACGTGGGACGTCCTGGAGAAG CTGGGAGCCGACACGACGGGGAGCCTCCACCTGGAGCCCGACGGCAAGTTCCCTCACCAC ATGCCCAACCCGGAGGACACGACCGCGATGTCCCTCACGCGCGATGCGGTCCTGGACCAC GGCGCGGACCTCGGCGTGGTGTTCGACACCGACGTGGACCGCAGCGGCGTGGTGGACGCC ACGGGCGCGGCCATCAACGGCGATCGGCTCATCGCGCTCATGTCCGCCATCGTGCTGGAC GAGCACCCCGGCACGACGGTGGTCACGGACGCGCGGACCAGCGACGGGCTCACCCGCTTC ATCCAGGCCAGGGGCGGCCACCACTGCCTCTACCGCGTCGGCTACCGAAACGTCATTGAC AAGGGCGTGCAGCTCAACGCCGACGGCGTCGAGACGCACCTCATGATGGAGACCACCGGC CACGGCGCGCTCAAGGAGAACAACTTTCTCGACGACGGTGCGTACATGGTGGTGAAGATT ATTATCGAGATGGTCAGGATGAGACTCGTGGGATTGGAGGGAAGCGTAGGAACACTCATC ATGGACCTTGAGGAGCCGGCTGAGTCCAAGCTGATGAGGATGAACATTCTGGGAGAAGCC AAGTATGCAAAACAAAGGGGCACTCAAGCAGTCGAGACTTTTAGGAACCATATCCAGGAA GGGAAACTAAATGGTTGGGTTCTCGATGACTGTGGGGATTGCTCGGTTAGCCAAGGATGC CTCGTGGACACGAATGATGATCCTTTTGATGTTGATGCGTACATGTACAGGGCTAAATTT TTTGATGAGTACAAGGGAGAACTGGGGTGGGTCCACATTCGCCAAAGTGTACATAACCCC AACATAGCAATAAATATGCAGTCTTCTATCCCTGGTGGATGCAAATCCATGGCAAAGGAT CTTCTTGACAGGTATCTACTGACGAGTGGAGTCAATGAGTTTGTTGACATCACCGAAGTA CAAAAGTTTGTAAAGTAG

Peptide Sequence

PEP ID	Os06t0476200-01
PEP Infomation	pep chromosome:IRGSP-1.0:6:16011333:16032779:1 gene:Os06g0476200 transcript:Os06t0476200-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Phosphoglucomutase precursor (EC 5.4.2.2). (Os06t0476200-01);Similar to predicted protein. (Os06t0476200-02)
Sequence	MAATIPASPATLQPCKKNVSGSMLIRSPPRPWRRRLPQHVVIVDASSSSRGPKAATGGRL ETSTDAAAVAGEDGDVIRRLQNGPDVRGVALEGENGRAVDLTPLAVEVIAESFGEWLREE LQQLESGRDGGEVRVSVGRDPRLSGARLGAALFAGLARAGCSVFDVGLATTPACFMSTKL PRFSYDASIMMTASHLPYTRNGLKFFMKRGGLTSGEVEGVCDRAARKYVARKMGLGGGRG MPPVVMRVDLMSAYAQHLRNIIKERVAHPTHYDTPLKGFKVIVNAGNGCGGFFTWDVLEK LGADTTGSLHLEPDGKFPHHMPNPEDTTAMSLTRDAVLDHGADLGVVFDTDVDRSGVVDA TGAAINGDRLIALMSAIVLDEHPGTTVVTDARTSDGLTRFIQARGGHHCLYRVGYRNVID KGVQLNADGVETHLMMETTGHGALKENNFLDDGAYMVVKIIIEMVRMRLVGLEGSVGTLI MDLEEPAESKLMRMNILGEAKYAKQRGTQAVETFRNHIQEGKLNGWVLDDCGDCSVSQGC LVDTNDDPFDVDAYMYRAKFFDEYKGELGWVHIRQSVHNPNIAINMQSSIPGGCKSMAKD LLDRYLLTSGVNEFVDITEVQKFVK

Transcript Sequence

Transcript ID	Os06t0476200-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:6:16011333:16032779:1 gene:Os06g0476200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Phosphoglucomutase precursor (EC 5.4.2.2). (Os06t0476200-01);Similar to predicted protein. (Os06t0476200-02)
Sequence	ATTTACACGCGCGGTGGTATAATATCTTCGCCATCGCGTGCCGGTTGCATTGCACCTCGT GATTGACCGTGCTACGACGTACGTACCATCATGGCTGCTACTATCCCCGCTTCTCCGGCC ACTCTGCAGCCATGCAAGAAAAACGTGAGCGGCAGCATGCTCATCCGGTCGCCTCCGCGC CCTTGGAGGAGGAGGCTCCCCCAGCACGTTGTAATAGTTGATGCGAGCTCATCGTCTCGT GGCCCGAAGGCAGCGACGGGTGGCCGGCTCGAGACGTCGACTGACGCTGCAGCGGTGGCC GGGGAGGATGGAGACGTGATCCGGAGGCTGCAGAACGGACCGGACGTGCGTGGCGTTGCG CTGGAAGGGGAGAACGGCCGGGCCGTGGACCTCACGCCGCTGGCGGTCGAGGTGATCGCC GAGAGCTTCGGGGAGTGGCTGCGGGAGGAGCTCCAGCAGCTGGAGAGCGGGAGGGACGGC GGCGAGGTGCGGGTGTCCGTCGGAAGGGACCCCCGCCTGTCTGGCGCGCGGCTCGGCGCA GCACTGTTCGCGGGGCTGGCGAGGGCAGGGTGTTCCGTGTTCGACGTGGGGCTCGCCACC ACGCCGGCTTGCTTCATGAGCACCAAGCTCCCACGGTTCAGCTATGACGCCTCCATCATG ATGACTGCATCACATCTCCCATACACTCGCAACGGCCTCAAGTTCTTCATGAAGCGCGGT GGTCTCACGTCCGGCGAGGTGGAAGGGGTCTGCGACCGTGCGGCGCGGAAGTACGTGGCC AGGAAGATGGGCCTTGGCGGCGGGCGAGGCATGCCGCCGGTGGTGATGCGCGTCGACTTG ATGAGCGCCTATGCGCAGCACCTCCGCAACATAATCAAGGAGCGTGTTGCCCACCCGACA CACTACGACACCCCCCTAAAGGGCTTCAAGGTGATCGTGAATGCCGGCAACGGCTGCGGA GGGTTCTTCACGTGGGACGTCCTGGAGAAGCTGGGAGCCGACACGACGGGGAGCCTCCAC CTGGAGCCCGACGGCAAGTTCCCTCACCACATGCCCAACCCGGAGGACACGACCGCGATG TCCCTCACGCGCGATGCGGTCCTGGACCACGGCGCGGACCTCGGCGTGGTGTTCGACACC GACGTGGACCGCAGCGGCGTGGTGGACGCCACGGGCGCGGCCATCAACGGCGATCGGCTC ATCGCGCTCATGTCCGCCATCGTGCTGGACGAGCACCCCGGCACGACGGTGGTCACGGAC GCGCGGACCAGCGACGGGCTCACCCGCTTCATCCAGGCCAGGGGCGGCCACCACTGCCTC TACCGCGTCGGCTACCGAAACGTCATTGACAAGGGCGTGCAGCTCAACGCCGACGGCGTC GAGACGCACCTCATGATGGAGACCACCGGCCACGGCGCGCTCAAGGAGAACAACTTTCTC GACGACGGTGCGTACATGGTGGTGAAGATTATTATCGAGATGGTCAGGATGAGACTCGTG GGATTGGAGGGAAGCGTAGGAACACTCATCATGGACCTTGAGGAGCCGGCTGAGTCCAAG CTGATGAGGATGAACATTCTGGGAGAAGCCAAGTATGCAAAACAAAGGGGCACTCAAGCA GTCGAGACTTTTAGGAACCATATCCAGGAAGGGAAACTAAATGGTTGGGTTCTCGATGAC TGTGGGGATTGCTCGGTTAGCCAAGGATGCCTCGTGGACACGAATGATGATCCTTTTGAT GTTGATGCGTACATGTACAGGGCTAAATTTTTTGATGAGTACAAGGGAGAACTGGGGTGG GTCCACATTCGCCAAAGTGTACATAACCCCAACATAGCAATAAATATGCAGTCTTCTATC CCTGGTGGATGCAAATCCATGGCAAAGGATCTTCTTGACAGGTATCTACTGACGAGTGGA GTCAATGAGTTTGTTGACATCACCGAAGTACAAAAGTTTGTAAAGTAGATATTATATTAT AATCATTAGCTTTCTACACTTTGTATGTATAACTTTTACATCCCTACTGGAAGATCGAAC AAGAGCTTTGCTCTTTCTGTAGAGTATGTAGAGACTATAATATTTTGATATCCTTTCAAT AGAAACCTGCATTAGTTT