Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os06t0474500-02
CDS Infomation	cds chromosome:IRGSP-1.0:6:15891370:15895564:-1 gene:Os06g0474500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF239, plant domain containing protein. (Os06t0474500-01);Protein of unknown function DUF239, plant domain containing protein. (Os06t0474500-02)
Sequence	ATGGCTTGTAGCTTCCACTTTGTTCCCTTGCTCCTCCTCCTCACCTTGCTCTTGCTCATC TCCTCTGCCAGTAGAACTGCTGCATTGCCCTCCATGCGCAGTAGCAGTGAAGACACCGCC AGTAATGCTACTGCTGCTGCAAGGCTTAGGCCAGGGAAGGAGCTGCTTAAGTACAAGAGG ATCAGGGCTCTCCTCAAGAAACTCAACAAGCCTTCTCTCAAGACCATTCAGAGCCCAGAT GGTGATCTCATAGACTGTGTTCCCTCTCATCTCCAACCTGCATTTGACCATCCAAAGCTC AAGGGACAAAAGCTTCTGGACCCACCGGAGAGGCCCAAGAACTACAACCTCACCATTGCC GTCAGCAGCAGCAGCAGCAGTAGAGTAGGTGAGGTGGTGGTGCAGGCCTGGCATGCCGCC GGCGAGGAGTGCCCGGAAGGGACGGTGGCGATACGCCGGACGACGGAGAAGGACCTGCTC AGGGCCAGCTCCCTCCGGAGGTACGGCAGGAAGCCGGCACGCCGGAATATTCGCCGTGAT TCCACCAGCAACGGCCATGAGCATGCAGTTGGATATGTGAACAATGATAATTACTATGGG GCCAAAGCTAGTGTTAATGTGTGGTCACCAAGGATAGGTGACCCATCTGAGTTCAGCCTG TCACAGATCTGGGTTATCTCTGGCTCCTTCGGCAATGATCTGAACACCATTGAAGCTGGA TGGCAGGTCAGCCCTGAGCTGTATGGAGACAGTAACCCAAGGTTCTTCACATATTGGACA ACCGACGCATATCAAGAGACCGGTTGCTACAACCACAACTGCCGTGGATTTGTCCAAACG ACCAACAAGATCGCGATCGGCGCGGCTATCACGCCAGAATCGGTGTACAACGGAAGGCAG TTTGACATTACCCTGATGCTATGGAAGGACCCCAAGCATGGGCACTGGTGGTTAGAGCTG GGCCCGGGTATGGTGGTGGGGTATTGGCCATCGTATCTGTTCACCCACCTGGCGCACCAC GGCAACATGGTGCAGTTTGGCGGCGAGGTGGTGAACACGCGGCCGTCGGGGTCGCACACG GCGACGCAGATGGGGAGCGGTCACTTCCCCGGCGAGGGGTTCGACCGCGCCGCCTACTTC CGCAACCTGCAGGTGGTGGACTGGGACAACAGCCTCATCCCGGCGGCCAACCTCAAGCTC CTCGCCGACCACCCTGCCTGCTACGACATCCAGGGAGGCTCCAACTCCTACTGGGGCAGC TACTTCTACTACGGCGGCCCCGGCAGGAATGTCAAATGCCCTTGA

Peptide Sequence

PEP ID	Os06t0474500-02
PEP Infomation	pep chromosome:IRGSP-1.0:6:15891370:15895564:-1 gene:Os06g0474500 transcript:Os06t0474500-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF239, plant domain containing protein. (Os06t0474500-01);Protein of unknown function DUF239, plant domain containing protein. (Os06t0474500-02)
Sequence	MACSFHFVPLLLLLTLLLLISSASRTAALPSMRSSSEDTASNATAAARLRPGKELLKYKR IRALLKKLNKPSLKTIQSPDGDLIDCVPSHLQPAFDHPKLKGQKLLDPPERPKNYNLTIA VSSSSSSRVGEVVVQAWHAAGEECPEGTVAIRRTTEKDLLRASSLRRYGRKPARRNIRRD STSNGHEHAVGYVNNDNYYGAKASVNVWSPRIGDPSEFSLSQIWVISGSFGNDLNTIEAG WQVSPELYGDSNPRFFTYWTTDAYQETGCYNHNCRGFVQTTNKIAIGAAITPESVYNGRQ FDITLMLWKDPKHGHWWLELGPGMVVGYWPSYLFTHLAHHGNMVQFGGEVVNTRPSGSHT ATQMGSGHFPGEGFDRAAYFRNLQVVDWDNSLIPAANLKLLADHPACYDIQGGSNSYWGS YFYYGGPGRNVKCP

Transcript Sequence

Transcript ID	Os06t0474500-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:6:15891370:15895564:-1 gene:Os06g0474500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF239, plant domain containing protein. (Os06t0474500-01);Protein of unknown function DUF239, plant domain containing protein. (Os06t0474500-02)
Sequence	AGCCTCCTCCTAGCTAGATGCTGGTGAGGCAAAGTTCAGTGATCACTTGCTTCAAAGGGT GCAGCAGTGTAGGAGAGGTGAGGAGGCACAGGAAGAAGACAACCACATACTATTGCCACT CTCTCCTGTGACTGTGTGTGTGTGCGCGTGTGCGTGCTTGCTAGATCCAGACAAGCTGTG GAAGCAAAAGGAGGATGGCTTGTAGCTTCCACTTTGTTCCCTTGCTCCTCCTCCTCACCT TGCTCTTGCTCATCTCCTCTGCCAGTAGAACTGCTGCATTGCCCTCCATGCGCAGTAGCA GTGAAGACACCGCCAGTAATGCTACTGCTGCTGCAAGGCTTAGGCCAGGGAAGGAGCTGC TTAAGTACAAGAGGATCAGGGCTCTCCTCAAGAAACTCAACAAGCCTTCTCTCAAGACCA TTCAGAGCCCAGATGGTGATCTCATAGACTGTGTTCCCTCTCATCTCCAACCTGCATTTG ACCATCCAAAGCTCAAGGGACAAAAGCTTCTGGACCCACCGGAGAGGCCCAAGAACTACA ACCTCACCATTGCCGTCAGCAGCAGCAGCAGCAGTAGAGTAGGTGAGGTGGTGGTGCAGG CCTGGCATGCCGCCGGCGAGGAGTGCCCGGAAGGGACGGTGGCGATACGCCGGACGACGG AGAAGGACCTGCTCAGGGCCAGCTCCCTCCGGAGGTACGGCAGGAAGCCGGCACGCCGGA ATATTCGCCGTGATTCCACCAGCAACGGCCATGAGCATGCAGTTGGATATGTGAACAATG ATAATTACTATGGGGCCAAAGCTAGTGTTAATGTGTGGTCACCAAGGATAGGTGACCCAT CTGAGTTCAGCCTGTCACAGATCTGGGTTATCTCTGGCTCCTTCGGCAATGATCTGAACA CCATTGAAGCTGGATGGCAGGTCAGCCCTGAGCTGTATGGAGACAGTAACCCAAGGTTCT TCACATATTGGACAACCGACGCATATCAAGAGACCGGTTGCTACAACCACAACTGCCGTG GATTTGTCCAAACGACCAACAAGATCGCGATCGGCGCGGCTATCACGCCAGAATCGGTGT ACAACGGAAGGCAGTTTGACATTACCCTGATGCTATGGAAGGACCCCAAGCATGGGCACT GGTGGTTAGAGCTGGGCCCGGGTATGGTGGTGGGGTATTGGCCATCGTATCTGTTCACCC ACCTGGCGCACCACGGCAACATGGTGCAGTTTGGCGGCGAGGTGGTGAACACGCGGCCGT CGGGGTCGCACACGGCGACGCAGATGGGGAGCGGTCACTTCCCCGGCGAGGGGTTCGACC GCGCCGCCTACTTCCGCAACCTGCAGGTGGTGGACTGGGACAACAGCCTCATCCCGGCGG CCAACCTCAAGCTCCTCGCCGACCACCCTGCCTGCTACGACATCCAGGGAGGCTCCAACT CCTACTGGGGCAGCTACTTCTACTACGGCGGCCCCGGCAGGAATGTCAAATGCCCTTGAA AGGATCTCGCTCTCTCCATCTCTTGTTGCTTGATGGCCGGTCACTCTTGTTTTTCTTTTT TTGTTCGTTTGTTTGTTTGTTTTCTTTCTTCTGTGTTCTTCTTTGTGATAGAGATTGGTT AGTGCATTAATGCTAGGATATTACTCTATTTGTTAGGTCTTAGCTTGAGCTGCTGAATGC ATATGGGAGCAATTAAATTGAGAGGGATTTGTAAATTTGAGAAGCACCTTGATTTTGGGA TCAATATATGCATTCAGTTCACAGAGTA