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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os06t0472200-02
CDS Infomation

cds chromosome:IRGSP-1.0:6:15724840:15727430:1 gene:Os06g0472200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Isoflavone reductase. (Os06t0472200-01);Similar to Isoflavone reductase. (Os06t0472200-02)
Sequence

TCTCTCATGGCGGCGGCGGGGAAGGAGCCGAGCAGGGTTCTGGTCATCGGCGGCACGGGC
TACATCGGCCGGTACATCGTCGCCGCCAGCGCCCGGGAGGACCACCTCACCTCCGTCCTC
GTCCGTGACCCGGCGCCGGCGGACCCTGCCAAGGCTGCCGTCCTCCAGGGCTTCCGGGAC
TCCGGAGCCACCCTCGTCAAGGGAGATCTTTATGGCCATCAAAGTTTGGTGGCAGCCATC
AAATCTGCTGATGTGGTTATCTCGGCTGTGGGTTACGCGCAACTAGCAGATCAAACCCGT
ATTATTTCTGCTATTAAAGAAGCAGGGAATGTGAAGAGATTCTTCCCTTCAGAGTATGGT
AATGATGTGGACCATGTACATGCAGTTGAGCCTGTGAAATCAGTGTATGCTACAAAAGCT
CGTATAAGGCGTGTAATTGAGGCTGAGGGGATCCCATACACATATGTCTCCTCGAACTTC
TTTGCTGGTCGTTTCTTGCCAAGTCTGGCACAGGCCTGGATCAAGGGCCTTCCAACCGAC
AAGGTTATCATCCTTGGTGATGGAAATGTAAAAGGAGTCTTTGCCACAGAGGAGGATGTG
GGTACCTACACTATTAAAGCTGTCGATGATCCAAGAACCCTGAACAAGATCTTGTATCTC
AGGCCATCAAGCAACATTTTGTCTCACAACGAGCTCGTCTCACTCTGGGAGAAGAAGGTT
GGCAAGACATTTGATAGGGTGTACATCCCAGAAGATGAAGTCCTGAAGAAGATTCAAGAA
TCCCCAGCACCGTTGAATGTCGTACTGTCAATCAACCATTCTGTCTGGGTGAAGGGGGAT
CACACCAACTTTGAGATCGAGCCTTCATTTGGAGTTGAAGCTACTGAACTTTACCCCGAT
GTGAAGTACACCACTGTGGATGAATACCTGAACAGGTTCCTTTGA

Peptide Sequence

PEP ID

Os06t0472200-02
PEP Infomation

pep chromosome:IRGSP-1.0:6:15724840:15727430:1 gene:Os06g0472200 transcript:Os06t0472200-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Isoflavone reductase. (Os06t0472200-01);Similar to Isoflavone reductase. (Os06t0472200-02)
Sequence

SLMAAAGKEPSRVLVIGGTGYIGRYIVAASAREDHLTSVLVRDPAPADPAKAAVLQGFRD
SGATLVKGDLYGHQSLVAAIKSADVVISAVGYAQLADQTRIISAIKEAGNVKRFFPSEYG
NDVDHVHAVEPVKSVYATKARIRRVIEAEGIPYTYVSSNFFAGRFLPSLAQAWIKGLPTD
KVIILGDGNVKGVFATEEDVGTYTIKAVDDPRTLNKILYLRPSSNILSHNELVSLWEKKV
GKTFDRVYIPEDEVLKKIQESPAPLNVVLSINHSVWVKGDHTNFEIEPSFGVEATELYPD
VKYTTVDEYLNRFL

Transcript Sequence

Transcript ID

Os06t0472200-02
Transcript Infomation

cdna chromosome:IRGSP-1.0:6:15724840:15727430:1 gene:Os06g0472200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Isoflavone reductase. (Os06t0472200-01);Similar to Isoflavone reductase. (Os06t0472200-02)
Sequence

TTCTCTCATGGCGGCGGCGGGGAAGGAGCCGAGCAGGGTTCTGGTCATCGGCGGCACGGG
CTACATCGGCCGGTACATCGTCGCCGCCAGCGCCCGGGAGGACCACCTCACCTCCGTCCT
CGTCCGTGACCCGGCGCCGGCGGACCCTGCCAAGGCTGCCGTCCTCCAGGGCTTCCGGGA
CTCCGGAGCCACCCTCGTCAAGGGAGATCTTTATGGCCATCAAAGTTTGGTGGCAGCCAT
CAAATCTGCTGATGTGGTTATCTCGGCTGTGGGTTACGCGCAACTAGCAGATCAAACCCG
TATTATTTCTGCTATTAAAGAAGCAGGGAATGTGAAGAGATTCTTCCCTTCAGAGTATGG
TAATGATGTGGACCATGTACATGCAGTTGAGCCTGTGAAATCAGTGTATGCTACAAAAGC
TCGTATAAGGCGTGTAATTGAGGCTGAGGGGATCCCATACACATATGTCTCCTCGAACTT
CTTTGCTGGTCGTTTCTTGCCAAGTCTGGCACAGGCCTGGATCAAGGGCCTTCCAACCGA
CAAGGTTATCATCCTTGGTGATGGAAATGTAAAAGGAGTCTTTGCCACAGAGGAGGATGT
GGGTACCTACACTATTAAAGCTGTCGATGATCCAAGAACCCTGAACAAGATCTTGTATCT
CAGGCCATCAAGCAACATTTTGTCTCACAACGAGCTCGTCTCACTCTGGGAGAAGAAGGT
TGGCAAGACATTTGATAGGGTGTACATCCCAGAAGATGAAGTCCTGAAGAAGATTCAAGA
ATCCCCAGCACCGTTGAATGTCGTACTGTCAATCAACCATTCTGTCTGGGTGAAGGGGGA
TCACACCAACTTTGAGATCGAGCCTTCATTTGGAGTTGAAGCTACTGAACTTTACCCCGA
TGTGAAGTACACCACTGTGGATGAATACCTGAACAGGTTCCTTTGAAATCTGTACAAATC
CTACAAGGCTCGAATATATAAAATATGGAATAGATATTAGACAGTGAAAGTTGTGTTTTT
CAATAAGCAAAATTTAATTTTGTACAAAACGCTCTAGAGTGTAACTTATTGAGAACAGTG
ATGCTGGTGCTGTCTTTGCTGCCACCGCCAGATTCATTGC