Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os06t0367100-01
CDS Infomation	cds chromosome:IRGSP-1.0:6:15335687:15365531:1 gene:Os06g0367100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Glycoside hydrolase, subgroup, catalytic core domain containing protein. (Os06t0367100-01);Similar to starch branching enzyme III. (Os06t0367100-02)
Sequence	ATGGATTCTTGCGCTCTCTTCCTCTCTACCCCGCGACCACCTCCTCCTCTCGTCCCCGCG CACCGCCGCCGACCCCTCGCGAGCCGCTCAGGCCTCCGCCGCCGGGAGGGTTGCCCCTGC AGCTGCGCCTCCTCCTCTTCCTCCTCCGGTCGTGCCGGTTCTCAGGACCGCCCGCCCAGG CCTTGGCAGCAGAAGCAGCGGACGCAGCGTCCCGGCCGCGGCGAGGCCATCGACCCAGTC GGCTTCCTCGCCAAGCACGGCATCTCCGACCGCGCGTTCGCGCAGTTCCTCCGTGACCGG TACAAAGCTTTGAAAGACCGTCGATGGGAGCTGCACTCTCGTCTAATTGATCTGAAAGAG GCATCTTCTGGGTTTGAGTTAATGGGCATGCATCGACATCGGCAGCACCGTGTGGATTTC ATGGAGTGGGCACCAGGTGCTCGTTATTGTTCTGTAGTGGGTGATTTTAATCAGTGGTCA ACTACTGAAAATTGTGCACGCGAAGGTCATTTGGGACATGATGATTTTGGATATTGGACT ATCATACTTGAAGATAAACTTAGGGAAGGGCAAGAACCAGATGAATATTATTTCCAAGAG TACAACTACGCAGATGATTATGACAAAGGTGATAATGGTGTTGATGTGGAAGAATTGATC CACAGAATGAACGAAGAGTATTGGGAACCTGGAGAAATTAAGTCACAGAAGTCTCGGTTA GAGGTGGTTGCTAAGCTATATGAGCAAATGTTTGGTCCAAATGGTCCACAAACAGAGGAG GAACTAGGTGACATACCTGATGCTGAAACAAGATATAATGAGTGGAAAGCCTTGCAGAAG GATGATTCAGCAAGTTCGTTGCCTTGCTATGATATCATTGATAATGGGCAGGAGTTTGAC ATTTTCAATGTTGCAACCGATCGAGTGTCATTTGAAAAATTTCAAGGAAAATCACCACCT CTTGCTTACTGGGTTGAAATGAGGAAAGGGCGAAAAGCTTGGTTGGAGAAATATGTTCCA GCAATTTCTCATAAAGACAAGTACCGTGTTTATTTTAACACTCCTGATGGTGGTTTGGAA CGCATTCCTGCTTGGGCTACTTATGTTCTTCCAGATGCTGAAGGGAAGCAGTCCTATGCA GTACACTGGGATCCTCCTCCAGAAGAAATTTATAAATGGAGATTTGAACGGCCGAAGGTC AAAGGTTCACTTAGGATATACGAATGTCATGTTGGAATAAGTGGATCGGAGCAAAAAATA TCGTCATTTCAGGAGTTCACATCAAATGTCCTCCCTCATATAAAAGATGCTGGCTATAAT GCTATTCAATTGATTGGAATTGTGGAACACAAGGATTACTCTTCTGTTGGCTATAAGGTC ACCAATTATTTTTCAGTCAGTAGCAGATTTGGCTCGCCAGATGACTTCAAAAAACTAGTG GATGAGGCACACGGCCTTGGATTAGTGGTGCTTCTTGATATTGTCCACTCCTATGCATCA GCAGATGAATTGGTTGGCTTATCCCTCTTTGATGGTTCTAATGATTGTTACTTCCACAGC GGAAAACGAGGGCACCACAAATACTGGGGTACCAGAATGTTCAAATATGATGATATTGAT GTTCTACACTTCTTATTGTCTAATTTAAATTGGTGGGTCACTGAATACCGTGTTGATGGA TTCCAGTTTCACTCACTGCCTTCTATGTTATATACTCATAATGGCTTTTCTACTTTCACT GGTGCCACTGAAGAGTATTACAATCAATACGTCGATGAGGATGCGCTGATATATTTAATT ATAGCAAATGAGATGTTGCATGAGCTTCATCCAGATATTATAACAATAGCTGAGGATGCA ACATTTTATCCTGGGCTATGTGAGCCAACCACTCAAGGCGGATTAGGATTTGATTACTGG GTCAATCTTTCAATTCCTGAAATGTGGTTGTGGCATCTTGAAAATGTTCCTGAGCAAGAA TGGAGCATGAATAAGATTATGAGAGTACTAGTAAACAACAACAGTAATATGCTATCTTAC GTCGAAAATCACAACCAGTCAATATCAGGGCGGAAATCTTTTGCTGAAATAATTCTTTAT GAAGGAAAGTGTTCAAATAGTTCTGTTGACAATGATTTGATTTTCAGGGCTTCCTCATTG CTCAATATAATCAAACTAATTACTTTTACAACAAGTGGTGGTGCATATCTCAACTTCATT GGAAATGAATTTGCACATCCAAAGAGAATTGAGTTTCCTATGTCAAGCAATGACTATTCC TTCTGCCTAGCTAATCGGCAATGGGAACTGCTGGACAAGGGTGTCCATAAACATATATTC AACTTTGACAAGGATATCATGAGCTTAGATGGCAAAGAGAGGCTAATTTCTGGGGGTTCA CCCATTGTTCATCACTGTGATGACACTAGCATGATCATATATTTTACTAGAGGACCTTTC CTTTTTGTTTTCAATTTCAATCCTGACGCCTCCTATCAGCTCTATTCTGTTGGTGTGGAT GAAGCTGGTGAATATCAGCTTATATTGAACACAGATGAAACTAAATATGGTGGACGTGGG GAGCTGACGAGCAATCAATATATGAAAAGAACCAGTGACAATAGGGTTGGTGGTTGCCGC AACTCCTTGGAATTGACATTACCATCTAGGAGTGCTCAGGTATTCAAGTTGGTCCGAATT TTGAGAATTTAG

Peptide Sequence

PEP ID	Os06t0367100-01
PEP Infomation	pep chromosome:IRGSP-1.0:6:15335687:15365531:1 gene:Os06g0367100 transcript:Os06t0367100-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Glycoside hydrolase, subgroup, catalytic core domain containing protein. (Os06t0367100-01);Similar to starch branching enzyme III. (Os06t0367100-02)
Sequence	MDSCALFLSTPRPPPPLVPAHRRRPLASRSGLRRREGCPCSCASSSSSSGRAGSQDRPPR PWQQKQRTQRPGRGEAIDPVGFLAKHGISDRAFAQFLRDRYKALKDRRWELHSRLIDLKE ASSGFELMGMHRHRQHRVDFMEWAPGARYCSVVGDFNQWSTTENCAREGHLGHDDFGYWT IILEDKLREGQEPDEYYFQEYNYADDYDKGDNGVDVEELIHRMNEEYWEPGEIKSQKSRL EVVAKLYEQMFGPNGPQTEEELGDIPDAETRYNEWKALQKDDSASSLPCYDIIDNGQEFD IFNVATDRVSFEKFQGKSPPLAYWVEMRKGRKAWLEKYVPAISHKDKYRVYFNTPDGGLE RIPAWATYVLPDAEGKQSYAVHWDPPPEEIYKWRFERPKVKGSLRIYECHVGISGSEQKI SSFQEFTSNVLPHIKDAGYNAIQLIGIVEHKDYSSVGYKVTNYFSVSSRFGSPDDFKKLV DEAHGLGLVVLLDIVHSYASADELVGLSLFDGSNDCYFHSGKRGHHKYWGTRMFKYDDID VLHFLLSNLNWWVTEYRVDGFQFHSLPSMLYTHNGFSTFTGATEEYYNQYVDEDALIYLI IANEMLHELHPDIITIAEDATFYPGLCEPTTQGGLGFDYWVNLSIPEMWLWHLENVPEQE WSMNKIMRVLVNNNSNMLSYVENHNQSISGRKSFAEIILYEGKCSNSSVDNDLIFRASSL LNIIKLITFTTSGGAYLNFIGNEFAHPKRIEFPMSSNDYSFCLANRQWELLDKGVHKHIF NFDKDIMSLDGKERLISGGSPIVHHCDDTSMIIYFTRGPFLFVFNFNPDASYQLYSVGVD EAGEYQLILNTDETKYGGRGELTSNQYMKRTSDNRVGGCRNSLELTLPSRSAQVFKLVRI LRI

Transcript Sequence

Transcript ID	Os06t0367100-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:6:15335687:15365531:1 gene:Os06g0367100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Glycoside hydrolase, subgroup, catalytic core domain containing protein. (Os06t0367100-01);Similar to starch branching enzyme III. (Os06t0367100-02)
Sequence	GCCGGGACCTTATCCCTCTCCTAAACCCCCACCCCCTCCCCCGACCCTTTCCCGTTCCTC CTTCCTCCGGCCGGTGCGGCGCCCCTCCCCTCTCCAACAATGGATTCTTGCGCTCTCTTC CTCTCTACCCCGCGACCACCTCCTCCTCTCGTCCCCGCGCACCGCCGCCGACCCCTCGCG AGCCGCTCAGGCCTCCGCCGCCGGGAGGGTTGCCCCTGCAGCTGCGCCTCCTCCTCTTCC TCCTCCGGTCGTGCCGGTTCTCAGGACCGCCCGCCCAGGCCTTGGCAGCAGAAGCAGCGG ACGCAGCGTCCCGGCCGCGGCGAGGCCATCGACCCAGTCGGCTTCCTCGCCAAGCACGGC ATCTCCGACCGCGCGTTCGCGCAGTTCCTCCGTGACCGGTACAAAGCTTTGAAAGACCGT CGATGGGAGCTGCACTCTCGTCTAATTGATCTGAAAGAGGCATCTTCTGGGTTTGAGTTA ATGGGCATGCATCGACATCGGCAGCACCGTGTGGATTTCATGGAGTGGGCACCAGGTGCT CGTTATTGTTCTGTAGTGGGTGATTTTAATCAGTGGTCAACTACTGAAAATTGTGCACGC GAAGGTCATTTGGGACATGATGATTTTGGATATTGGACTATCATACTTGAAGATAAACTT AGGGAAGGGCAAGAACCAGATGAATATTATTTCCAAGAGTACAACTACGCAGATGATTAT GACAAAGGTGATAATGGTGTTGATGTGGAAGAATTGATCCACAGAATGAACGAAGAGTAT TGGGAACCTGGAGAAATTAAGTCACAGAAGTCTCGGTTAGAGGTGGTTGCTAAGCTATAT GAGCAAATGTTTGGTCCAAATGGTCCACAAACAGAGGAGGAACTAGGTGACATACCTGAT GCTGAAACAAGATATAATGAGTGGAAAGCCTTGCAGAAGGATGATTCAGCAAGTTCGTTG CCTTGCTATGATATCATTGATAATGGGCAGGAGTTTGACATTTTCAATGTTGCAACCGAT CGAGTGTCATTTGAAAAATTTCAAGGAAAATCACCACCTCTTGCTTACTGGGTTGAAATG AGGAAAGGGCGAAAAGCTTGGTTGGAGAAATATGTTCCAGCAATTTCTCATAAAGACAAG TACCGTGTTTATTTTAACACTCCTGATGGTGGTTTGGAACGCATTCCTGCTTGGGCTACT TATGTTCTTCCAGATGCTGAAGGGAAGCAGTCCTATGCAGTACACTGGGATCCTCCTCCA GAAGAAATTTATAAATGGAGATTTGAACGGCCGAAGGTCAAAGGTTCACTTAGGATATAC GAATGTCATGTTGGAATAAGTGGATCGGAGCAAAAAATATCGTCATTTCAGGAGTTCACA TCAAATGTCCTCCCTCATATAAAAGATGCTGGCTATAATGCTATTCAATTGATTGGAATT GTGGAACACAAGGATTACTCTTCTGTTGGCTATAAGGTCACCAATTATTTTTCAGTCAGT AGCAGATTTGGCTCGCCAGATGACTTCAAAAAACTAGTGGATGAGGCACACGGCCTTGGA TTAGTGGTGCTTCTTGATATTGTCCACTCCTATGCATCAGCAGATGAATTGGTTGGCTTA TCCCTCTTTGATGGTTCTAATGATTGTTACTTCCACAGCGGAAAACGAGGGCACCACAAA TACTGGGGTACCAGAATGTTCAAATATGATGATATTGATGTTCTACACTTCTTATTGTCT AATTTAAATTGGTGGGTCACTGAATACCGTGTTGATGGATTCCAGTTTCACTCACTGCCT TCTATGTTATATACTCATAATGGCTTTTCTACTTTCACTGGTGCCACTGAAGAGTATTAC AATCAATACGTCGATGAGGATGCGCTGATATATTTAATTATAGCAAATGAGATGTTGCAT GAGCTTCATCCAGATATTATAACAATAGCTGAGGATGCAACATTTTATCCTGGGCTATGT GAGCCAACCACTCAAGGCGGATTAGGATTTGATTACTGGGTCAATCTTTCAATTCCTGAA ATGTGGTTGTGGCATCTTGAAAATGTTCCTGAGCAAGAATGGAGCATGAATAAGATTATG AGAGTACTAGTAAACAACAACAGTAATATGCTATCTTACGTCGAAAATCACAACCAGTCA ATATCAGGGCGGAAATCTTTTGCTGAAATAATTCTTTATGAAGGAAAGTGTTCAAATAGT TCTGTTGACAATGATTTGATTTTCAGGGCTTCCTCATTGCTCAATATAATCAAACTAATT ACTTTTACAACAAGTGGTGGTGCATATCTCAACTTCATTGGAAATGAATTTGCACATCCA AAGAGAATTGAGTTTCCTATGTCAAGCAATGACTATTCCTTCTGCCTAGCTAATCGGCAA TGGGAACTGCTGGACAAGGGTGTCCATAAACATATATTCAACTTTGACAAGGATATCATG AGCTTAGATGGCAAAGAGAGGCTAATTTCTGGGGGTTCACCCATTGTTCATCACTGTGAT GACACTAGCATGATCATATATTTTACTAGAGGACCTTTCCTTTTTGTTTTCAATTTCAAT CCTGACGCCTCCTATCAGCTCTATTCTGTTGGTGTGGATGAAGCTGGTGAATATCAGCTT ATATTGAACACAGATGAAACTAAATATGGTGGACGTGGGGAGCTGACGAGCAATCAATAT ATGAAAAGAACCAGTGACAATAGGGTTGGTGGTTGCCGCAACTCCTTGGAATTGACATTA CCATCTAGGAGTGCTCAGGTATTCAAGTTGGTCCGAATTTTGAGAATTTAGATTCTCAAG GATGAGCATTGTTGATAGACCAAGCAATTCGGGTCCTCAGAAGACGGAACTTCTCTGTTA ATATCTGAACTCTTGCAAACTTAAAGATTCGCATGGCAAAAACTGAGGGGAAAAGAACAC CACCGTAGTGAGAGGATCCTTCAGGTATGAATGTCCATGCAGATGCAGATTGTTGGGTTG ATGTTCGACGTCTCTGATTTGACCTTCTGTTGTGGTACAATATGAAGTATTGCAGTATTT ATTTAGACCTCAAATTGCCTGTTCTGCTCACTCGTGTACCTTGATTCCATGCCTAGTGTG GGCGTGGCACCGTGGCTAGTTTAATCAAGGATGCTATAGAGTATATAGACTCATAGCTCC ACAGTGAAACGCTCATAAGGAGTGCTATTGAAACTAATAAGGCTTTGTTTGTTCCAGCTG GGAACCTCGTAAGGAGTGCTATTGAAACTAATAAGGCTTCGTTTATTCC