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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os06t0360300-02
CDS Infomation

cds chromosome:IRGSP-1.0:6:14880277:14892647:-1 gene:Os06g0360300 gene_biotype:protein_coding transcript_biotype:protein_coding description:NAD(P)-binding domain containing protein. (Os06t0360300-01);Similar to 3-beta hydroxysteroid dehydrogenase/isomerase. (Os06t0360300-02)
Sequence

TCGTCGGACGCCAAGAAGACGACCACCGTCTTCGTGGCCGGCTCGACGGGCCGCACCGGC
AAGCGGGTCGTGGAGAAGCTTCTGGAGAGGGGCTTCGGCGTGGTCGCCGGCACGACAGAC
GTGGGCCGCGCCCGCAGAAGCCTGCCCCAGGACCCAAACCTCCAGCTCGTGAGGGCTGAC
GTCATGGAGGGCACAGACAAGTTGGTCGATGCGATCCGTGGCGCCGACGCCGTCGTCTGT
GCGACGGGGTTCCGGCGGTCGTTCGATCCCTTTGCTCCATGGAAGGTGGACAACTTTGGC
ACAGTAAACCTTGTTGAAGCATGCCGCAAGGCTGGGGTTACAAGATTCATACTCGTAAGT
TCCATTTTGGTCAATGGGGCTGCGATGGGTCAACTGTTGAATCCAGCATATACTGTGCTC
AACTTGTTTGGTTTAGTGCTGGTCGCAAAGCTGCAGGCGGAGAAACATATCAGGTCATCA
GGAATAAATTACACCATTATAAGGCCTGGAGGCCTGACTGAACAACCACCAACAGGGAAT
ATAGTCATGGAGCCAGAGGATACACTTTACGAGGGCTCCATATCGAGACAGCAAGTCGCA
GAAGTAGCTGTGGAGGCATTGTTATGCCGAGAGGAATCTTCCTACAAAGTTGTCGAGATT
GTCACCCGAGCTGAAGCTCACAATCGTCCTCTCAAGGATCTGTTTGCTTCTATTAAGCAA
AGCTGA

Peptide Sequence

PEP ID

Os06t0360300-02
PEP Infomation

pep chromosome:IRGSP-1.0:6:14880277:14892647:-1 gene:Os06g0360300 transcript:Os06t0360300-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:NAD(P)-binding domain containing protein. (Os06t0360300-01);Similar to 3-beta hydroxysteroid dehydrogenase/isomerase. (Os06t0360300-02)
Sequence

SSDAKKTTTVFVAGSTGRTGKRVVEKLLERGFGVVAGTTDVGRARRSLPQDPNLQLVRAD
VMEGTDKLVDAIRGADAVVCATGFRRSFDPFAPWKVDNFGTVNLVEACRKAGVTRFILVS
SILVNGAAMGQLLNPAYTVLNLFGLVLVAKLQAEKHIRSSGINYTIIRPGGLTEQPPTGN
IVMEPEDTLYEGSISRQQVAEVAVEALLCREESSYKVVEIVTRAEAHNRPLKDLFASIKQ
S

Transcript Sequence

Transcript ID

Os06t0360300-02
Transcript Infomation

cdna chromosome:IRGSP-1.0:6:14880277:14892647:-1 gene:Os06g0360300 gene_biotype:protein_coding transcript_biotype:protein_coding description:NAD(P)-binding domain containing protein. (Os06t0360300-01);Similar to 3-beta hydroxysteroid dehydrogenase/isomerase. (Os06t0360300-02)
Sequence

TTCGTCGGACGCCAAGAAGACGACCACCGTCTTCGTGGCCGGCTCGACGGGCCGCACCGG
CAAGCGGGTCGTGGAGAAGCTTCTGGAGAGGGGCTTCGGCGTGGTCGCCGGCACGACAGA
CGTGGGCCGCGCCCGCAGAAGCCTGCCCCAGGACCCAAACCTCCAGCTCGTGAGGGCTGA
CGTCATGGAGGGCACAGACAAGTTGGTCGATGCGATCCGTGGCGCCGACGCCGTCGTCTG
TGCGACGGGGTTCCGGCGGTCGTTCGATCCCTTTGCTCCATGGAAGGTGGACAACTTTGG
CACAGTAAACCTTGTTGAAGCATGCCGCAAGGCTGGGGTTACAAGATTCATACTCGTAAG
TTCCATTTTGGTCAATGGGGCTGCGATGGGTCAACTGTTGAATCCAGCATATACTGTGCT
CAACTTGTTTGGTTTAGTGCTGGTCGCAAAGCTGCAGGCGGAGAAACATATCAGGTCATC
AGGAATAAATTACACCATTATAAGGCCTGGAGGCCTGACTGAACAACCACCAACAGGGAA
TATAGTCATGGAGCCAGAGGATACACTTTACGAGGGCTCCATATCGAGACAGCAAGTCGC
AGAAGTAGCTGTGGAGGCATTGTTATGCCGAGAGGAATCTTCCTACAAAGTTGTCGAGAT
TGTCACCCGAGCTGAAGCTCACAATCGTCCTCTCAAGGATCTGTTTGCTTCTATTAAGCA
AAGCTGAGTAACGGAGCACAACTGAACAAGTTGTTCCGGCCCTGAACTTCAAAGGGGGCT
AGCATTATTCCAGAAATTGTATAGTGATGTGTCAGGGTGTTCATACCTAGTTAGGAAAAA
TAGTTGTCCTAATATAGTGATTTAATGTTCTTTACTATAAAATGGAATACGCACACCCAC
ATCATCGTTATAAACTATAATTCTCACATC