Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os06t0358800-01
CDS Infomation

cds chromosome:IRGSP-1.0:6:14770312:14773944:1 gene:Os06g0358800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Ribonuclease III domain containing protein. (Os06t0358800-01)
Sequence

ATGGAAAGCCCGCCGCACGCCACCGCCTCCGCCGACGAGATGCCGAGCATATGGAAGGAG
CAGCACGCGCAGGACGCGCCGCCGGGGTTCGTGCCGCCGATGGGCCCCGGCGAGGTCGCC
GCCGTGGAGTCGCTCCTCGGCTACGAGTTCAGGGACAAGGCGCTGGTGGAGGAGGCCCTC
ACGCACGGCTCCTTCTACTACCCCTACCGCCCCGGCGTGACCTACGAGCGCCTCGAATAC
CTCGGCGACGCCGTGCTCACCTGCGTCGTGTCGCGGGAGGTCTTCCTCACCTACGGCCAG
CTCCAGCCGGGCCCCCTCACCCGCCTCCGCGCCGCCAACGTCGATAAGGAGAAGCTCGCG
CGCGTCGCCGTCGTGCACGGCCTCCACCACTTCCTCCGCCACAAGGCACCCAACCTTGAC
GGCCAGATTACAGATTTCATAGAAGAATTGTCGATGTACCCAATTCACTCCAACGGATTA
TTGGATCCTCCAAAAGTGCTCTGTGACGTTGTGGAATCCCTTATTGGTGCCATATATTGT
GACTCCAACTTCAACCAAGAAATAGTTTGGCAGGTTTTTCAAAAGTTGGCTGATCCACTT
ATTAGTCTTGAGACATTAGGCAAGCATCCTGTAAGCGAGCTTTTTGAGTTTTGCCAAAAA
ACTCGCCGAGGTGTGAAAATTGTGAAGGATGAATGGGATAAGAATTTGACAGTTGAAGTA
TTGATTGACGGTGAGATGGTTGGAAGGGCAACTTATGCTCAAAAGAAGGAGATAGCGCAG
AATCGTGCTGCAAAGGCTGCTCTGGATAAATTAAAGGAGACATTGGGACAATCCCAAACT
GAACCAATGTCAGCAGAAGTTTCCGAACAATTCAATAAAATAGATCTAACTGGAAGTTGA

Peptide Sequence

PEP ID

Os06t0358800-01
PEP Infomation

pep chromosome:IRGSP-1.0:6:14770312:14773944:1 gene:Os06g0358800 transcript:Os06t0358800-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Ribonuclease III domain containing protein. (Os06t0358800-01)
Sequence

MESPPHATASADEMPSIWKEQHAQDAPPGFVPPMGPGEVAAVESLLGYEFRDKALVEEAL
THGSFYYPYRPGVTYERLEYLGDAVLTCVVSREVFLTYGQLQPGPLTRLRAANVDKEKLA
RVAVVHGLHHFLRHKAPNLDGQITDFIEELSMYPIHSNGLLDPPKVLCDVVESLIGAIYC
DSNFNQEIVWQVFQKLADPLISLETLGKHPVSELFEFCQKTRRGVKIVKDEWDKNLTVEV
LIDGEMVGRATYAQKKEIAQNRAAKAALDKLKETLGQSQTEPMSAEVSEQFNKIDLTGS

Transcript Sequence

Transcript ID

Os06t0358800-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:6:14770312:14773944:1 gene:Os06g0358800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Ribonuclease III domain containing protein. (Os06t0358800-01)
Sequence

GTGTGCACGCCGGCGCTACTCGCTGCAATACAAAACCCTCTCGCCTAGACTCGCCCCTCG
ATCGAGTCATCGAGCCATGGAAAGCCCGCCGCACGCCACCGCCTCCGCCGACGAGATGCC
GAGCATATGGAAGGAGCAGCACGCGCAGGACGCGCCGCCGGGGTTCGTGCCGCCGATGGG
CCCCGGCGAGGTCGCCGCCGTGGAGTCGCTCCTCGGCTACGAGTTCAGGGACAAGGCGCT
GGTGGAGGAGGCCCTCACGCACGGCTCCTTCTACTACCCCTACCGCCCCGGCGTGACCTA
CGAGCGCCTCGAATACCTCGGCGACGCCGTGCTCACCTGCGTCGTGTCGCGGGAGGTCTT
CCTCACCTACGGCCAGCTCCAGCCGGGCCCCCTCACCCGCCTCCGCGCCGCCAACGTCGA
TAAGGAGAAGCTCGCGCGCGTCGCCGTCGTGCACGGCCTCCACCACTTCCTCCGCCACAA
GGCACCCAACCTTGACGGCCAGATTACAGATTTCATAGAAGAATTGTCGATGTACCCAAT
TCACTCCAACGGATTATTGGATCCTCCAAAAGTGCTCTGTGACGTTGTGGAATCCCTTAT
TGGTGCCATATATTGTGACTCCAACTTCAACCAAGAAATAGTTTGGCAGGTTTTTCAAAA
GTTGGCTGATCCACTTATTAGTCTTGAGACATTAGGCAAGCATCCTGTAAGCGAGCTTTT
TGAGTTTTGCCAAAAAACTCGCCGAGGTGTGAAAATTGTGAAGGATGAATGGGATAAGAA
TTTGACAGTTGAAGTATTGATTGACGGTGAGATGGTTGGAAGGGCAACTTATGCTCAAAA
GAAGGAGATAGCGCAGAATCGTGCTGCAAAGGCTGCTCTGGATAAATTAAAGGAGACATT
GGGACAATCCCAAACTGAACCAATGTCAGCAGAAGTTTCCGAACAATTCAATAAAATAGA
TCTAACTGGAAGTTGAAAAGTTCAGTGCAGTGGCAAACCAAGGCCTCAGGCCACCTAAGG
CTATGGGCTTGGCCTGGGACAGAAAGTCCATTGGATTACCTGTTTTTCTTTTCTTTTTTT
TTATAAACAAATCTTACTGCTTAGGATGTGGCTCATCCCATAGAGTACCAGCCCGGTACT
CGCCTAAATCCTATTGGTCTGCCGCTGGTTGGGGCTAATCATTCATCGATGTCAAAAAAA
GTAAGGTGGATTTAGATAACTAATTCTTTTACATTTTATTTTATTAAGTTGAAATGTAAT
TATCGATATGTAAAATATATTGAAATCATTATCAAGATTTCATAAGCCAATGGTTTTTCT
AAGTTAACTTGTTAGGTGTTCGTGAGTTGCAACAGGAAAAGAAGTATGTATCAATTTAGA
ATCACATCATGTAAACCTTAATAATCTTTGAGCGT