Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os06t0354500-01
CDS Infomation	cds chromosome:IRGSP-1.0:6:14504152:14512950:-1 gene:Os06g0354500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Acyl-coenzyme A oxidase 3, peroxisomal precursor (EC 1.3.3.6) (AOX 3) (Medium-chain acyl-CoA oxidase) (AtCX3). (Os06t0354500-01)
Sequence	ATGGATCCATCGTACCCTCCCTCCGCCACCGCCCGCCGCGCCGCCGCCATCGCCCGCCAC CTCGCCGGCCTCTCCCCTCGCGACGCCGCCGCCGTTGCTGCAGCGCTGGAGCCCTCCGCG TGCCTGAGCTACGCGCCCCCGGAGTCGTCGGAGCCCGCCCCTGCGTTCTCGCCGCTGGAG CTCCGCTCGCTCCTCGACGGGCACCACCTCCGGGAGCGCGACTGGGCGTTCCGCGCGATG GAGGAGAGCCCGCTCTTCTGCCAGCGCCGCAGCGGCGGAAAGGTGTTCGTGTCTCCGGAC TACAACGAGGGCAAGGAGGGGCAGCGGGAGGCCACGATGCGGCGGGTCGGCTACCTGGCG CGGCGGGGCGTGTTCCGGGGCTGGCTCACGGAGCCGGGGCCCGACGCCGAGCTCCGCAAG CTCGCGCTGCTCGAGTGCCTCGGCATGTATGACCACTCCCTCGCCATCAAGATCGGCGTC CACTTCTTCCTCTGGGGCAGCGCAATCAAGTTTCTTGGAACAAAGCGCCACCATGACAAA TGGTTGTCGGACACAGAAAATTATGTTATCAAGGGTTGTTTTTCCATGACAGAACTGGGT CATGGGAGCAATGTCCGAGGAATTGAGACAGTGGCTACTTATGATATTAAAACAAGAGAG TTTGTGATAAATACTCCTTGTGAATCAGCCCAGAAGTACTGGATTGGTGGAGCTGCTAAT CATGCTACACATACTATAGTCTTTGCGCAGCTCCATATAAATGGGAGAAATGAAGGAGTC CATGCTTTTGTAGCTCAGATTAGGGATGAACATGAAAATGTTATGCCTAATATCCAGATA GCTGACTGTGGCCATAAAATTGGATTAAATGGTGTTGATAATGGACGAATTTGGTTTAAC AATATACGTGTTCCTCGAGAGAATTTGCTGAATCTTGTTGCTGATGTTTTGCCGGATGGG CAATATGTTAGCACGATAGATGACCCTGATCAGAGGTTTGCAGCATTTTTATCTCCACTT ACACTTGGTCGAGTTAATATTGCAGTTAATGCGGTTTATATTTCAAAGGTTGGCGTTGCA ATTGCTGTGAGATATGCTTTGTCAAGGAGAGCCTTTTCAGTTACACCGGATGGTCCTGAA ATGCTGTTACTTGATTATCCCAGTCACCAGCGACGCCTTCTACCACTGCTAGCAAAAGCA TGTCTGATGAGCAGTGCTGGTAATTTTATGAAAAGGATGTATGTGAAGAGGACTCCTGAA CTTAACAAATCTATACACATTTACTCTAGTGCTCTTAAAGCTACACTTACCTGGCAGAAT ATGACCACACTTCAGGAGTGCCGTGAAGCTTGTGGTGGCCAAGGTTTGAAGACAGAGAAT CGCATAGGAATTTTCAAAGCTGAATTTGATGTCCAGTCTACATTTGAGGGCGACAATAAT GTTCTAATGCAGCAGGTAAGCAAAGCCCTTTATGCTGAATTTTTGACAGCAAAAAGGAAG AATCAACCATTCAAGGGATTGGGCTTGGAACACTTGAATGGTCCTTGCCCTGTTATTCCT GATTATCTGACAAGTGGCACACTAAGAAGCTCCAGTTTCCAGATGGACTTGCTCTGCTTG AGGGAGCGAGATTTACTGAAACGATTCACCACGGAGGTTTCTAACTATCTGGCACAAGGA GAAAACAGAGAGAAGGCTTTGATGCTGAGCTACCAACTCGCTGAAGACTTAGCTAGAGCA TTTACTGAGCGCACAATTTTGCAAATATTTTTGGAGGATGAGAAGAATATTCCTACTGGT TCTTTAAAGGATATATTGGGCTTACTAAGGTCTTTATATGTTATGGTTTGCATAGACGAA TCTGCATCCTTTTTGAGATATGGTTGCCTATCGCGAGAGAATGTAGCCGCTGCTAGGAAA GAAGTGATGACACTGTGCAGTGAACTCAGGCCCCACGCACTTGCTATTGTCAGTTCCTTC GGAATCCCAGATGCCTTCCTTAGCCCACTCGCTTTTGACTGGATTGAGGCAAATGCACGG TCTTCTGGGAATGAATGA

Peptide Sequence

PEP ID	Os06t0354500-01
PEP Infomation	pep chromosome:IRGSP-1.0:6:14504152:14512950:-1 gene:Os06g0354500 transcript:Os06t0354500-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Acyl-coenzyme A oxidase 3, peroxisomal precursor (EC 1.3.3.6) (AOX 3) (Medium-chain acyl-CoA oxidase) (AtCX3). (Os06t0354500-01)
Sequence	MDPSYPPSATARRAAAIARHLAGLSPRDAAAVAAALEPSACLSYAPPESSEPAPAFSPLE LRSLLDGHHLRERDWAFRAMEESPLFCQRRSGGKVFVSPDYNEGKEGQREATMRRVGYLA RRGVFRGWLTEPGPDAELRKLALLECLGMYDHSLAIKIGVHFFLWGSAIKFLGTKRHHDK WLSDTENYVIKGCFSMTELGHGSNVRGIETVATYDIKTREFVINTPCESAQKYWIGGAAN HATHTIVFAQLHINGRNEGVHAFVAQIRDEHENVMPNIQIADCGHKIGLNGVDNGRIWFN NIRVPRENLLNLVADVLPDGQYVSTIDDPDQRFAAFLSPLTLGRVNIAVNAVYISKVGVA IAVRYALSRRAFSVTPDGPEMLLLDYPSHQRRLLPLLAKACLMSSAGNFMKRMYVKRTPE LNKSIHIYSSALKATLTWQNMTTLQECREACGGQGLKTENRIGIFKAEFDVQSTFEGDNN VLMQQVSKALYAEFLTAKRKNQPFKGLGLEHLNGPCPVIPDYLTSGTLRSSSFQMDLLCL RERDLLKRFTTEVSNYLAQGENREKALMLSYQLAEDLARAFTERTILQIFLEDEKNIPTG SLKDILGLLRSLYVMVCIDESASFLRYGCLSRENVAAARKEVMTLCSELRPHALAIVSSF GIPDAFLSPLAFDWIEANARSSGNE

Transcript Sequence

Transcript ID	Os06t0354500-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:6:14504152:14512950:-1 gene:Os06g0354500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Acyl-coenzyme A oxidase 3, peroxisomal precursor (EC 1.3.3.6) (AOX 3) (Medium-chain acyl-CoA oxidase) (AtCX3). (Os06t0354500-01)
Sequence	TCCAACTTCCATCACAATCCCACCAAATCCTTGTCCTCACGTCAACGATCGCAAGCCATA GCTCCGATGGATCCATCGTACCCTCCCTCCGCCACCGCCCGCCGCGCCGCCGCCATCGCC CGCCACCTCGCCGGCCTCTCCCCTCGCGACGCCGCCGCCGTTGCTGCAGCGCTGGAGCCC TCCGCGTGCCTGAGCTACGCGCCCCCGGAGTCGTCGGAGCCCGCCCCTGCGTTCTCGCCG CTGGAGCTCCGCTCGCTCCTCGACGGGCACCACCTCCGGGAGCGCGACTGGGCGTTCCGC GCGATGGAGGAGAGCCCGCTCTTCTGCCAGCGCCGCAGCGGCGGAAAGGTGTTCGTGTCT CCGGACTACAACGAGGGCAAGGAGGGGCAGCGGGAGGCCACGATGCGGCGGGTCGGCTAC CTGGCGCGGCGGGGCGTGTTCCGGGGCTGGCTCACGGAGCCGGGGCCCGACGCCGAGCTC CGCAAGCTCGCGCTGCTCGAGTGCCTCGGCATGTATGACCACTCCCTCGCCATCAAGATC GGCGTCCACTTCTTCCTCTGGGGCAGCGCAATCAAGTTTCTTGGAACAAAGCGCCACCAT GACAAATGGTTGTCGGACACAGAAAATTATGTTATCAAGGGTTGTTTTTCCATGACAGAA CTGGGTCATGGGAGCAATGTCCGAGGAATTGAGACAGTGGCTACTTATGATATTAAAACA AGAGAGTTTGTGATAAATACTCCTTGTGAATCAGCCCAGAAGTACTGGATTGGTGGAGCT GCTAATCATGCTACACATACTATAGTCTTTGCGCAGCTCCATATAAATGGGAGAAATGAA GGAGTCCATGCTTTTGTAGCTCAGATTAGGGATGAACATGAAAATGTTATGCCTAATATC CAGATAGCTGACTGTGGCCATAAAATTGGATTAAATGGTGTTGATAATGGACGAATTTGG TTTAACAATATACGTGTTCCTCGAGAGAATTTGCTGAATCTTGTTGCTGATGTTTTGCCG GATGGGCAATATGTTAGCACGATAGATGACCCTGATCAGAGGTTTGCAGCATTTTTATCT CCACTTACACTTGGTCGAGTTAATATTGCAGTTAATGCGGTTTATATTTCAAAGGTTGGC GTTGCAATTGCTGTGAGATATGCTTTGTCAAGGAGAGCCTTTTCAGTTACACCGGATGGT CCTGAAATGCTGTTACTTGATTATCCCAGTCACCAGCGACGCCTTCTACCACTGCTAGCA AAAGCATGTCTGATGAGCAGTGCTGGTAATTTTATGAAAAGGATGTATGTGAAGAGGACT CCTGAACTTAACAAATCTATACACATTTACTCTAGTGCTCTTAAAGCTACACTTACCTGG CAGAATATGACCACACTTCAGGAGTGCCGTGAAGCTTGTGGTGGCCAAGGTTTGAAGACA GAGAATCGCATAGGAATTTTCAAAGCTGAATTTGATGTCCAGTCTACATTTGAGGGCGAC AATAATGTTCTAATGCAGCAGGTAAGCAAAGCCCTTTATGCTGAATTTTTGACAGCAAAA AGGAAGAATCAACCATTCAAGGGATTGGGCTTGGAACACTTGAATGGTCCTTGCCCTGTT ATTCCTGATTATCTGACAAGTGGCACACTAAGAAGCTCCAGTTTCCAGATGGACTTGCTC TGCTTGAGGGAGCGAGATTTACTGAAACGATTCACCACGGAGGTTTCTAACTATCTGGCA CAAGGAGAAAACAGAGAGAAGGCTTTGATGCTGAGCTACCAACTCGCTGAAGACTTAGCT AGAGCATTTACTGAGCGCACAATTTTGCAAATATTTTTGGAGGATGAGAAGAATATTCCT ACTGGTTCTTTAAAGGATATATTGGGCTTACTAAGGTCTTTATATGTTATGGTTTGCATA GACGAATCTGCATCCTTTTTGAGATATGGTTGCCTATCGCGAGAGAATGTAGCCGCTGCT AGGAAAGAAGTGATGACACTGTGCAGTGAACTCAGGCCCCACGCACTTGCTATTGTCAGT TCCTTCGGAATCCCAGATGCCTTCCTTAGCCCACTCGCTTTTGACTGGATTGAGGCAAAT GCACGGTCTTCTGGGAATGAATGACTCCACGCTACCATCAGGTAGTTATGGGGTTTTCCA ATGGAACTACTACAGATGGACAGCCAAACACACTATACGCAAAGATAGGTGTACATTTGC AACTACTTCCTGTCAAGATAGGTTACAATAATTTCTCTGAAGTGTATAGTTCGAGATGGT GATGTTGATCTGGACTTCATAGAAGTTTATGTTCTTGTAATTTGCACTTCAGAATGGGAC ATACGTGAATAAGTGGAACTTCAGAATGGG