Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os06t0353400-01
CDS Infomation

cds chromosome:IRGSP-1.0:6:14418163:14428791:-1 gene:Os06g0353400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Histone mRNA exonuclease 1. (Os06t0353400-01);Hypothetical conserved gene. (Os06t0353400-02)
Sequence

ATGGCGCTCGCTAGGGTTTCTCCCCCCGCGTTCTCCTCCCCCTTCCTGATCCATTCCTTA
CTGCGCCCCTTCTCTTCGCCCTCCTCCGTCTTGCGCCCTCGCGTGACTCGCGTCCCCCAC
CACCGAGGCTTCGCCATCGCCGCCGCCTTATCTCAGGCCTCTCCGCTTCCCTCTGCGGAC
GGGGATGGGGCGGTGATGGAGGCGCCGCCGCGGCCGAGCTCCAGGCGCCCATGGAAGCCC
ACGTGCCTGTACTACACCCAGGGGAAATGCACCATGTTGAATGATACTTTGCATCTTGAG
AAATTCAATCACAATCTGCCAACAGACCTTCCAGTGAATTATTCAGCTGCAGATAAAGTG
AAATCTCAGAAATTGGATTACTTTTTGGTCCTTGATTTGGAAGGTAAGGTTGAAATTCTT
GAATTCCCAGTTGTAATGATTGATGCCCAAAGCATGGAGTTCGTCGATTCATTTCACAGG
TATAGCCCATCTGTACATTAA

Peptide Sequence

PEP ID

Os06t0353400-01
PEP Infomation

pep chromosome:IRGSP-1.0:6:14418163:14428791:-1 gene:Os06g0353400 transcript:Os06t0353400-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Histone mRNA exonuclease 1. (Os06t0353400-01);Hypothetical conserved gene. (Os06t0353400-02)
Sequence

MALARVSPPAFSSPFLIHSLLRPFSSPSSVLRPRVTRVPHHRGFAIAAALSQASPLPSAD
GDGAVMEAPPRPSSRRPWKPTCLYYTQGKCTMLNDTLHLEKFNHNLPTDLPVNYSAADKV
KSQKLDYFLVLDLEGKVEILEFPVVMIDAQSMEFVDSFHRYSPSVH

Transcript Sequence

Transcript ID

Os06t0353400-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:6:14418163:14428791:-1 gene:Os06g0353400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Histone mRNA exonuclease 1. (Os06t0353400-01);Hypothetical conserved gene. (Os06t0353400-02)
Sequence

ACCCGCAAAACCCCATCAGTCTGCTGCGGCCATAGCGAACTGTAGGGTAGCTTCGCCTTA
GATGGCGCTCGCTAGGGTTTCTCCCCCCGCGTTCTCCTCCCCCTTCCTGATCCATTCCTT
ACTGCGCCCCTTCTCTTCGCCCTCCTCCGTCTTGCGCCCTCGCGTGACTCGCGTCCCCCA
CCACCGAGGCTTCGCCATCGCCGCCGCCTTATCTCAGGCCTCTCCGCTTCCCTCTGCGGA
CGGGGATGGGGCGGTGATGGAGGCGCCGCCGCGGCCGAGCTCCAGGCGCCCATGGAAGCC
CACGTGCCTGTACTACACCCAGGGGAAATGCACCATGTTGAATGATACTTTGCATCTTGA
GAAATTCAATCACAATCTGCCAACAGACCTTCCAGTGAATTATTCAGCTGCAGATAAAGT
GAAATCTCAGAAATTGGATTACTTTTTGGTCCTTGATTTGGAAGGTAAGGTTGAAATTCT
TGAATTCCCAGTTGTAATGATTGATGCCCAAAGCATGGAGTTCGTCGATTCATTTCACAG
GTATAGCCCATCTGTACATTAATAGTTATTGAAATATTCTTCTCAATACATAAGACTATT
TGAATGATTACCAAACTCGCCCCCAAACATAGATGAGTTTTGCAACTTTTATTTCTCTAA
TTTCTTGTGAATATTCTTTGGTGGTAATATAGTTCTTTATTAGTTTAAATACAGAAGGTT
TAGCTTTGTATGGTTCTCATTTCACTCAGTTGAGCACCAAGAACTATTATCAAGATTAGT
GAGAAATTTAATCGAAGAACTATGAGATTAAGATTTAAGATGCAATATTTGAATCCCTTT
TGTGGAATATGTTGTCTTTTTTACTTCGATTTTTTTTTTTTGAAAATATGTTCACTCATT
CTGACTTACCGATATTATACTTCCCTCAACCATCTAAGGATCCTGCCTCTCTTTTGCAAC
TCGTTTGTTAGAGTGTTTTTCTCTTTTCCCGTCACTCTACTCAAGGCTAGTTGATCATCA
AACTTCCCACAAGACCATCTCTTACGGAGAAAATTCTTGAAAACTTATGCAAATTTATAG
TTTTCAAAGCTTTCAACAAAAAAGGGGCACTTAAGAGAAATCATAAATTCCTGTAAGAAC
TTTTTACAACACAATTGAGGAATATTGAAAATTTTTCATTATTTCAACATATATATTTGA
GGAAAATTTGATGTAACTATACTATTCGAAAGCGCCTCAATCATTTCAATTTTCATGCGG
TGAACCTAAAAAAGTTCTCTAGGGTATTTTTATTTGTGAAATTATGAAAGATTTGTTTCA
GGGTAATCCATGATCTTTTTCAGGATTTTTGTATTCTTTTTCGATTTTTTATTAAGTTAA
CTTCATAACGGCATTATTCTTAAAAGTAAATTTGGTTGTAACCAGTGTTGACTGAGCATG
GATGCCAAAAAGGAGAGATTTAGTGGTTTAGTAACGGAAGAGGGGCAAGGAGAGGTTTAC
TGTTGACTGAACAGGGATGGTAGAAAACATAATATAGTCTTAAAACTCGCAATGAATGGC
AAAATTAAAATTTCAGTATATTGTTCTGTTTCATACAGGAGAGCCCATGCTGGTTGAGAT
GTGTAATAATTGAGTGAATTAAAACATATAAGCATATAACTGAATACAAATTAAATTTTT
AGGAAGTACATTTTATGACTAGATGGATGCACATAAACCGCTACAATTGGAAATTTTGCA
ACAGCTATACTGCAGCTAGAGTGTGTCTAGGGATTCATGGACAAACAACAGAACCAAAAA
TATTTTTCCTGGTTTTACTTTTCTGTTCTTATCCAATGGTTCTGCATGACTCAAGTTCTT
AATTTCCTCCCAAAAATATCCTTTTGAATTTCTACTTTCTAAAAGAAAGAATCAAGGTCC
TGAATTTACATGCTGTTTGTTCTTTGCAAAATCTAAAAACCATAGGATATCAATATCATG
AATATGGGCAATGCATGTTTGGTTGAGTGCCAACCTTTGCTAAACTTGTGGCAACCAAGT
TTGACCAACTAAGGCTAGCGTTTGGTTCATGCCACAAGTGAGTTATGCCACACTTTCTGT
TAGCTGGTCCACTTGTCATAGAGTGAATTTTTTGCCACAACTTGTCACAATTGTGGCCAA
CAAATTCTTGGCCACACAATGTGCGGCATGCCACACGCCAAATATATTGTTATGGAACCA
TCCAAACAGCCCATATATACCACACATGCAGAAAATATCCTCTAAAGACATGCCATTTTA
GCTGGTGTCATGGGCATTGGGCTTAGAGGCGACCCACTGGACAGCCCAATACATGGTGTG
TGAATAATACTCGCATGATAGTGTAGCATTTGTTACAGTCAGACAAATTATATCAGCTGT
TTCTTTCTTGTGTGATGCTGTAAGTTTGAATAGACATCTAAATATTTTAAATAAGTGAGA
AAAATGTGACACTGTAACATTGTATAACTTAGTATATGCAATATTTCATATTGTTTTATT
CGTTTGTGATGTTAATCCTTTCTGTATTTTCTTGCCTTTTCAGTAATATCAGTTACTATC
TCTATCCCCTCGTGTGTTGCTTGTAGGTTTGTACACCCTACTGCGATGAGTGAGCAAAGA
ATAAGAGAATATATTGAAGGGAAATATGGGAAATTTGGAGTTGACCGGTATTTGTAGCAC
TATTTAACTCTGTTTCTCACTGCAGAATAACTTGTTTGATGATTTGATCGTAATTTTCAG
TAGCTATACATCATTAACTATTTTGCTGTTAAAGCGGGAGTCGTTTTTTTTTTCCTTAAC
ATAGGTTCAGTTAGTCTTATCATGAATGTAACCCATGAATTGGCTGGTTATATGGATACA
TCTAGAGGCGAATCAAACCCTTTAGCTTGTAAAATTTCTAGATTCTTCAGTTGTCTTATT
TATCATTTTCTTTATGAGTTTGTAACTTCAGTTTGTGATGTTCTAAACTGTATCCACTGG
TCTAGGTTTAATCTAGTTTGGTTTGCTTTATTTCTTGTATAAAATGTTCTATATATTTTA
TTTCTTGATTGCATTCCTTCTTATGGATTGAGTTTTGTATACCACTATCCTTTTGGTAAA
ACTGTGTTTTGTCATCAACCCATCTTCATTAGTCACCTGTATTTTATGCATATTATCACT
TTGTGTTTGCAGTGTTATTCCATTGTCATCCTAAAATATTTCTATGATCTAGAATTCTTG
ACGTGCATTTGTTAACTCTAGATATGTGGAAGTAATATGTACTAATTTGTTGTGTAATAT
GTAGTGTATGGCATGATACTGCTATACCTTTCATGGAAGTACTTCAAGAGTTTGAAGACT
GGATCGAACATCACAAATTTTGGAAAAAGGAGCAAGGAGGAGCACTCAACAGTGCAGCAT
TCATCACTTGTGGGAATTGGGATCTGAAGACAAAGGTACCTGAACAGTGCAGGGTTTCAA
AAATTAAGTTACCTTCTTACTTTATGGAGTGGATCAATTTGAAGGATATCTATCTCAACT
TCTATAACAGAAGGGCTACCGGAATGATGACAATGATGAGGGAGCTACAAATGCCAATCG
TCGGAAGCCATCATCTCGGTATAGATGATGCAAAAAATATAGCAAGGGTTGTTCAGCGTA
TGCTAGCTGATGGTGCTGTAATGCAAATTACTGCAAAGAGGCAATCAGCTACTGGCGATG
TGAAATTTCTTTTCAAGAATCGGATCAGGTAAAAGGAGCATTATGGGATGTAATTATTTA
CACACAGCAGCTAGAAGATGAGAAGATGCCCTCCGGTGAAATGAAACAATAGTTTGGCCC
TAGTAACCGCTTGGGAGTTGGGACCAGAGAAGTGTTGGACTGCTGATGGTTCATGTTGGG
TCAAGGCGTCAAAGGCAAGAGAATGAAGCTCCCAAATTCCAAGGTTCTGCAAATGCCTTT
CCACGGGAGAGATGCCAGTAGCCCAGTATACCAGAGGCCTTGTTGCCCAAAAAGGAACCG
CAAAGAAGTGTAGGAGCTCACATGCGGTGGTCTGGTAAATCTGACCCTGTTTTGCTTTTG
GCACTGACAGTAATACGCGTACACCCGAATGGCCGAATATGTGCTTTGTCCTATACTCCA
CGTACTTCATCTATCTTACATTATAAGATGTTTTGTTTTGAATAGATTCATACATGATCT
ATGTATGTCCCTTTATATATATGTGTTTAAATTTAATAGATGTTAGTGAGGGACGGAGAG
AAACATCTTATCAATTATAATGTGGAACGGTGTACTTGAGTTTTTTGCCTGAGCTGAAAT
GTTTTAGAATTGTTTCATTTGTTAAATATGTAAGCCCTTGTATTTCTTTTTCAATTAC