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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os06t0350600-00
CDS Infomation

cds chromosome:IRGSP-1.0:6:14208411:14210920:1 gene:Os06g0350600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Pathogenesis-related protein 1 (Fragment). (Os06t0350600-00)
Sequence

CAAAGTTTATTAAAAAGAAAAACTAAAAATAATCCCCTTTCCTCCTTTGGGCCGAGTTTA
GCCCAAAGTCTTTCTCTCCTCCCTCCCTTTTCCCTTCTCTCTCGGGCCTCCTCTCCCCTC
GGCCCAGCTCCGTCCCCCTCCCTTCCTTCTCTCGGGCCACCCCTCTCCCCTCCCCTCGGC
CCAGCTCCCTCCTCTCCTCCTCCCGCCTGGGCCTGCCCCGGCCCAAGCCGAGCCGCAGCC
CTCCCGCGCACGCGCGCCGCACGCGCGTTGACCGCGCACCTCCCACGTGGGTCCCGCCCG
TCAGGCAACTCGCCGCACGACTTCCTGCAACCCCACAACGCCGCGCGCGCGGAGGTCGGT
GTCGGCAAGCTCTCCTGGGACGGCACCCTCGCCGCGTACGCGCGGAGGTACGGCGAGAAG
AGGTCCCACGACTGCACGCTCAAGCACTCCCGTGGGCCGTATGGGGAGAACATCTACCGG
GGCAGCGCCGGGCGGCGGCGGACGGCCGCGGACGCGGTGGCGCGGTGGGTCCGCGAGAGC
GCCTACTACGACTGCGGGAGCAACACCTGCGTGCCGGGGCGGCGTTGCGGGCACTACACG
CAGGTCACGTGGGCACGGACCACGAGGCTCGGGTGCGCCGCCGTGACGTGCGATAGCGGC
GCCACGTTCGTGGTGTGTAGCTACGATCCACCGGGCAACACCAACGGGAGAGGTCCGTAC
CCTGGATGTGGGGATTATGATGTCGTGTCCGAATAG

Peptide Sequence

PEP ID

Os06t0350600-00
PEP Infomation

pep chromosome:IRGSP-1.0:6:14208411:14210920:1 gene:Os06g0350600 transcript:Os06t0350600-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Pathogenesis-related protein 1 (Fragment). (Os06t0350600-00)
Sequence

QSLLKRKTKNNPLSSFGPSLAQSLSLLPPFSLLSRASSPLGPAPSPSLPSLGPPLSPPLG
PAPSSPPPAWACPGPSRAAALPRTRAARALTAHLPRGSRPSGNSPHDFLQPHNAARAEVG
VGKLSWDGTLAAYARRYGEKRSHDCTLKHSRGPYGENIYRGSAGRRRTAADAVARWVRES
AYYDCGSNTCVPGRRCGHYTQVTWARTTRLGCAAVTCDSGATFVVCSYDPPGNTNGRGPY
PGCGDYDVVSE

Transcript Sequence

Transcript ID

Os06t0350600-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:6:14208411:14210920:1 gene:Os06g0350600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Pathogenesis-related protein 1 (Fragment). (Os06t0350600-00)
Sequence

CAAAGTTTATTAAAAAGAAAAACTAAAAATAATCCCCTTTCCTCCTTTGGGCCGAGTTTA
GCCCAAAGTCTTTCTCTCCTCCCTCCCTTTTCCCTTCTCTCTCGGGCCTCCTCTCCCCTC
GGCCCAGCTCCGTCCCCCTCCCTTCCTTCTCTCGGGCCACCCCTCTCCCCTCCCCTCGGC
CCAGCTCCCTCCTCTCCTCCTCCCGCCTGGGCCTGCCCCGGCCCAAGCCGAGCCGCAGCC
CTCCCGCGCACGCGCGCCGCACGCGCGTTGACCGCGCACCTCCCACGTGGGTCCCGCCCG
TCAGGCAACTCGCCGCACGACTTCCTGCAACCCCACAACGCCGCGCGCGCGGAGGTCGGT
GTCGGCAAGCTCTCCTGGGACGGCACCCTCGCCGCGTACGCGCGGAGGTACGGCGAGAAG
AGGTCCCACGACTGCACGCTCAAGCACTCCCGTGGGCCGTATGGGGAGAACATCTACCGG
GGCAGCGCCGGGCGGCGGCGGACGGCCGCGGACGCGGTGGCGCGGTGGGTCCGCGAGAGC
GCCTACTACGACTGCGGGAGCAACACCTGCGTGCCGGGGCGGCGTTGCGGGCACTACACG
CAGGTCACGTGGGCACGGACCACGAGGCTCGGGTGCGCCGCCGTGACGTGCGATAGCGGC
GCCACGTTCGTGGTGTGTAGCTACGATCCACCGGGCAACACCAACGGGAGAGGTCCGTAC
CCTGGATGTGGGGATTATGATGTCGTGTCCGAATAG