Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os06t0342500-01
CDS Infomation	cds chromosome:IRGSP-1.0:6:13690561:13697904:-1 gene:Os06g0342500 gene_biotype:protein_coding transcript_biotype:protein_coding description:K Homology, type 1, subgroup domain containing protein. (Os06t0342500-01)
Sequence	ATGGATCGCCCGCGCTCCTCCAAGCGCGGCTACCACTACGACCAGGACTCGCCGCCGCCC CGCTCCAAGCCACGCTTCGACCGCCGCGGCGGCCCCAACCCTAACAACAGCTACCACCGC CGCGGCCCCCCCGGTGGCGGCGGCGGCGACCGCCGTGGCGGCTTCCAGCTGCCACCCGAC GCCGCCCCGCCCCCGCCCCCACCCCCGCCGCCTTCCTCCGCGGCGGCGGGGGGCGGGGGG CCCGGCATGACCACCTCCTTCCGCATCCTGTGCCCGCAGTCCAAGGTCTACGGCTTCCCG CCCAGCTTCATCGCCAAGGTGCGGGACGACACCAACGCGGTCGTCACCATCCACCTGCCC TACCCTGGCGACGCGGTCCGCGTCATCGAGACGTCCGACGGCGCGCGCCGCGAGGCGGAT GGGCGGCCGCCCTCGTTCTCGCCGGCGCAGGAGGCGCTCCTCATGGTGCACCGGCGGATC CTGGAGACGGAACCAGACGACGGCGATGAGGATGGCGAGTATGGGCCCAGGGCCAAGGAT GCCAGGGACCGAGGCAAGGTGACCACGCGCCTCATCGTGCCGCGCCTCCATGTTGGGTGC CTCCTTGGTAAGGGTGGCAAGATCATTGAGCAGATGAGGGCCGAGACCAAAACGCACATC AGGATCCTGCCACGCGACCAGCACACGCCGCGGTGTGTATCGTTGTCGGAGGAGGTTGTA CAGGTTGTTGGAGAGGGGAATTGTGTTAAAAAGGCTGTAGCGATAATCTCCGATCGCCTA AAGGAAAGCTTACACCGTGACCGTGGCCCCTTCCGTGGACGGATGAATTCACCAGAGCAT CGATTTCCTCAAGAGGATGAATACTATGGTGGTGCACAGCAGATGCCTGCATATGAAGAA CCTTATGGTCGACCTGATCAAATTAGAAATAATACTAGCATGGAGCTGCCAGGGTATGAG TTTGATTCAAATGGTGGCAAGATCAATGATCACACAGAAATTCTGTTCGATGACATCATA TTTCGAATTCTTTGCCCAAGTGACAAGGTTAACAGTTTAGTCGGAACACGTGATGGATTG TTAGAGATGTTACAGGAAGATGTTGGTGTTGATATTAGGCTTACTGATTCTCTTGATGGC TCTGACGAAAGGATCATAATCATCACATCAAGAGAGGGCCCAGACCATGAGCTTTTTCCA GCTCAGGAAGCATTGCTGCACCTCCAAACTCATATTGTAGACCTTGGTCCTGATAAAGAC AACATTATTACAACAAGGTTACTTGTCCCTTCAAGTGAAATTGCTTGCTTCGAGGGAAGG GATGGATCATTATCTGATATACAGAGACAGACCAGTGCAAATGTACAGATATTACCAAGG CAAGCTCTTCCATCTTGTGCTCTAGAGTCTGATGAGCTTATACAGATTGTAGGAGAGATT AGAGCTGCACGGGATGCTCTTGTGCAAATAACTGCAAAATTACGGAGTTACTTCTACCGC GAGATTCCTGGTCCTAACCAACTTGGCAATATTACTGTTCATGGCTCCATTTCTCCAGCA AAAGGTTCACCTAGAGGACCATACCAGGGAAGTGATATTCCAATGCCATCCTACCAACAA GCACAGCATGTTCCAGCTTCATGGAAGGATAGTGGAGGTGGTGCAAATATGTCGTTTGAG CAAGGGAGCAACATTAATGATGATATGAGGCAAAGTGCTGCAAAACGATTTGCTGTTCCT CTAGTGACAAGAAGCACATTAGAAGTTGTCATACCAAAGAGTGCTGTTGCAAGCCTTACT ATGAGAGCTGGAAGCAAGCTTGCTCAAATAAGCGAGATGTCTGGTGCCACTGTCACACTT GCTGACGAAAGGCCTGACGCCATAGAAAAAGTTGTTCGAATATCTGGTACTCCTGAGCAG GCTGACAAAGCTCAGAGCCTGCTTCAGGGATTTATTCTTAGCATCCAAGATGACATTCCT TCAGGCTAA

Peptide Sequence

PEP ID	Os06t0342500-01
PEP Infomation	pep chromosome:IRGSP-1.0:6:13690561:13697904:-1 gene:Os06g0342500 transcript:Os06t0342500-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:K Homology, type 1, subgroup domain containing protein. (Os06t0342500-01)
Sequence	MDRPRSSKRGYHYDQDSPPPRSKPRFDRRGGPNPNNSYHRRGPPGGGGGDRRGGFQLPPD AAPPPPPPPPPSSAAAGGGGPGMTTSFRILCPQSKVYGFPPSFIAKVRDDTNAVVTIHLP YPGDAVRVIETSDGARREADGRPPSFSPAQEALLMVHRRILETEPDDGDEDGEYGPRAKD ARDRGKVTTRLIVPRLHVGCLLGKGGKIIEQMRAETKTHIRILPRDQHTPRCVSLSEEVV QVVGEGNCVKKAVAIISDRLKESLHRDRGPFRGRMNSPEHRFPQEDEYYGGAQQMPAYEE PYGRPDQIRNNTSMELPGYEFDSNGGKINDHTEILFDDIIFRILCPSDKVNSLVGTRDGL LEMLQEDVGVDIRLTDSLDGSDERIIIITSREGPDHELFPAQEALLHLQTHIVDLGPDKD NIITTRLLVPSSEIACFEGRDGSLSDIQRQTSANVQILPRQALPSCALESDELIQIVGEI RAARDALVQITAKLRSYFYREIPGPNQLGNITVHGSISPAKGSPRGPYQGSDIPMPSYQQ AQHVPASWKDSGGGANMSFEQGSNINDDMRQSAAKRFAVPLVTRSTLEVVIPKSAVASLT MRAGSKLAQISEMSGATVTLADERPDAIEKVVRISGTPEQADKAQSLLQGFILSIQDDIP SG

Transcript Sequence

Transcript ID	Os06t0342500-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:6:13690561:13697904:-1 gene:Os06g0342500 gene_biotype:protein_coding transcript_biotype:protein_coding description:K Homology, type 1, subgroup domain containing protein. (Os06t0342500-01)
Sequence	GAGCAGTGAGCACACACGCTCACCTCCTCACTCTCCGATCCATGGCGCCCTCCCCCTTGT CGCTCTAAACCCTAATCCGAACCGAGCAATCAAACCAAAATCGAACGAATTCGAGGACGA GGGTGGGGAGCCCTCGAATCCGGCAATGGATCGCCCGCGCTCCTCCAAGCGCGGCTACCA CTACGACCAGGACTCGCCGCCGCCCCGCTCCAAGCCACGCTTCGACCGCCGCGGCGGCCC CAACCCTAACAACAGCTACCACCGCCGCGGCCCCCCCGGTGGCGGCGGCGGCGACCGCCG TGGCGGCTTCCAGCTGCCACCCGACGCCGCCCCGCCCCCGCCCCCACCCCCGCCGCCTTC CTCCGCGGCGGCGGGGGGCGGGGGGCCCGGCATGACCACCTCCTTCCGCATCCTGTGCCC GCAGTCCAAGGTCTACGGCTTCCCGCCCAGCTTCATCGCCAAGGTGCGGGACGACACCAA CGCGGTCGTCACCATCCACCTGCCCTACCCTGGCGACGCGGTCCGCGTCATCGAGACGTC CGACGGCGCGCGCCGCGAGGCGGATGGGCGGCCGCCCTCGTTCTCGCCGGCGCAGGAGGC GCTCCTCATGGTGCACCGGCGGATCCTGGAGACGGAACCAGACGACGGCGATGAGGATGG CGAGTATGGGCCCAGGGCCAAGGATGCCAGGGACCGAGGCAAGGTGACCACGCGCCTCAT CGTGCCGCGCCTCCATGTTGGGTGCCTCCTTGGTAAGGGTGGCAAGATCATTGAGCAGAT GAGGGCCGAGACCAAAACGCACATCAGGATCCTGCCACGCGACCAGCACACGCCGCGGTG TGTATCGTTGTCGGAGGAGGTTGTACAGGTTGTTGGAGAGGGGAATTGTGTTAAAAAGGC TGTAGCGATAATCTCCGATCGCCTAAAGGAAAGCTTACACCGTGACCGTGGCCCCTTCCG TGGACGGATGAATTCACCAGAGCATCGATTTCCTCAAGAGGATGAATACTATGGTGGTGC ACAGCAGATGCCTGCATATGAAGAACCTTATGGTCGACCTGATCAAATTAGAAATAATAC TAGCATGGAGCTGCCAGGGTATGAGTTTGATTCAAATGGTGGCAAGATCAATGATCACAC AGAAATTCTGTTCGATGACATCATATTTCGAATTCTTTGCCCAAGTGACAAGGTTAACAG TTTAGTCGGAACACGTGATGGATTGTTAGAGATGTTACAGGAAGATGTTGGTGTTGATAT TAGGCTTACTGATTCTCTTGATGGCTCTGACGAAAGGATCATAATCATCACATCAAGAGA GGGCCCAGACCATGAGCTTTTTCCAGCTCAGGAAGCATTGCTGCACCTCCAAACTCATAT TGTAGACCTTGGTCCTGATAAAGACAACATTATTACAACAAGGTTACTTGTCCCTTCAAG TGAAATTGCTTGCTTCGAGGGAAGGGATGGATCATTATCTGATATACAGAGACAGACCAG TGCAAATGTACAGATATTACCAAGGCAAGCTCTTCCATCTTGTGCTCTAGAGTCTGATGA GCTTATACAGATTGTAGGAGAGATTAGAGCTGCACGGGATGCTCTTGTGCAAATAACTGC AAAATTACGGAGTTACTTCTACCGCGAGATTCCTGGTCCTAACCAACTTGGCAATATTAC TGTTCATGGCTCCATTTCTCCAGCAAAAGGTTCACCTAGAGGACCATACCAGGGAAGTGA TATTCCAATGCCATCCTACCAACAAGCACAGCATGTTCCAGCTTCATGGAAGGATAGTGG AGGTGGTGCAAATATGTCGTTTGAGCAAGGGAGCAACATTAATGATGATATGAGGCAAAG TGCTGCAAAACGATTTGCTGTTCCTCTAGTGACAAGAAGCACATTAGAAGTTGTCATACC AAAGAGTGCTGTTGCAAGCCTTACTATGAGAGCTGGAAGCAAGCTTGCTCAAATAAGCGA GATGTCTGGTGCCACTGTCACACTTGCTGACGAAAGGCCTGACGCCATAGAAAAAGTTGT TCGAATATCTGGTACTCCTGAGCAGGCTGACAAAGCTCAGAGCCTGCTTCAGGGATTTAT TCTTAGCATCCAAGATGACATTCCTTCAGGCTAATTGGAGACAGTGGAGGCCTACGCTGT CATGTTCAGTAGGGTGTAATGCATCTTGAGTTTTTGTGAGGTATTTTAACCTCTGCTAGC ATGAGGTGTGCCTGACTTAGCATTATTCGTGGGCAAAATGTTCATGTATACCACCAAGTT GCCAACATGTACTGTCCAAAGTCCTAAAACATATTATGCGGTTTCTCGCAATCACCCCCA CCGCTTTTTTTTCCTTTTTCTTTTTCCTTTTTTTGAGAAACAATCACCCTACCGCTGATA CCTCATATTATGCGGCTGAGAGGCCAAGTGTAAAAAAAAAAGGGCTGAATAGGGCACTAT TCGTT