Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os06t0341300-01
CDS Infomation	cds chromosome:IRGSP-1.0:6:13630101:13631408:1 gene:Os06g0341300 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:LATE EMBRYOGENESIS ABUNDANT PROTEIN 33 description:Seed maturation protein domain containing protein. (Os06t0341300-01)
Sequence	ATGGCGCAGCCGCAGCCGCAGAGAATGGAGGACCAGCTGCAATCCCAGGCCCAGGGCCAG GGCCAGGGCCAGACGGAGGCCATCAAGTACGGCCACGTGTTCGCCGTCACGGGCGAGCTC GCCGGCCAGCCCATCGCGCCGCGGGACGCCGCCGCGATGCGCTCCGCCGAGGAGAGCGTG CCGGGCGTCCCCGTCCCGCAGGATATCGGCGGGGGCTACAGCGCCGGGGTCGCCATGGAG ACGGCCGCCGCGTACAACCAGGCCGTCGCCGCCGTTCGTCCCGGCCAGGCCAGCGACGCC GCCACCAACCAGGGCATCGCCGTCACCCAGACCTCCGTGCCCGGCGGCCGCATCATCACC GAGTTCGTCGCCGGCCAGGTGGTGGGGCAGTACTCCGTCGCCGACCAGGCGGTGGAGCAG GACGCGACCAAGATAACCGTGGGCGAGGCGCTGGAGGCGACGGCGCTGGCCGCGGGCGAA CGTCCGGTGGACAGGACGGACGTGGAGGCCATCCGCGCGGCGGAGATGGCGGCGCAAGGG TCCGACGTGACCATGCCCGGCGGCCTCGCCGACCAGGCGCAGGCGGCGGCGCGCTCCAAC GCCGACGCCGACCGCGACGACGACAAGATCACGGTGGGCGATGTCCTCACGGACGCGACG GCGAAGCTGGCGGGGGACAAGGTGGCGGGGGCAGAGGACGCGGCGAAGGTTGTGCAGGCG GAGACGTACAGCGACGCCGCAGCGCGGACCAGGGCCGGCGGGGTGGGCGCCGCGGTGTCC ACGGCGGCGAGGCTCAACCAAGCCGACGACGACGCCGATGACGACGCTGAGTGA

Peptide Sequence

PEP ID	Os06t0341300-01
PEP Infomation	pep chromosome:IRGSP-1.0:6:13630101:13631408:1 gene:Os06g0341300 transcript:Os06t0341300-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:LATE EMBRYOGENESIS ABUNDANT PROTEIN 33 description:Seed maturation protein domain containing protein. (Os06t0341300-01)
Sequence	MAQPQPQRMEDQLQSQAQGQGQGQTEAIKYGHVFAVTGELAGQPIAPRDAAAMRSAEESV PGVPVPQDIGGGYSAGVAMETAAAYNQAVAAVRPGQASDAATNQGIAVTQTSVPGGRIIT EFVAGQVVGQYSVADQAVEQDATKITVGEALEATALAAGERPVDRTDVEAIRAAEMAAQG SDVTMPGGLADQAQAAARSNADADRDDDKITVGDVLTDATAKLAGDKVAGAEDAAKVVQA ETYSDAAARTRAGGVGAAVSTAARLNQADDDADDDAE

Transcript Sequence

Transcript ID	Os06t0341300-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:6:13630101:13631408:1 gene:Os06g0341300 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:LATE EMBRYOGENESIS ABUNDANT PROTEIN 33 description:Seed maturation protein domain containing protein. (Os06t0341300-01)
Sequence	ACGTCCGATCATACATACTCTCGATCCGCCGGAGCACCACCGGAGTAAGCATTACCACTA CTACTACGAGCTAGCTTGCCGGAGGAAACAGGGCACGGAGGGATAGAGGTAGCCATGGCG CAGCCGCAGCCGCAGAGAATGGAGGACCAGCTGCAATCCCAGGCCCAGGGCCAGGGCCAG GGCCAGACGGAGGCCATCAAGTACGGCCACGTGTTCGCCGTCACGGGCGAGCTCGCCGGC CAGCCCATCGCGCCGCGGGACGCCGCCGCGATGCGCTCCGCCGAGGAGAGCGTGCCGGGC GTCCCCGTCCCGCAGGATATCGGCGGGGGCTACAGCGCCGGGGTCGCCATGGAGACGGCC GCCGCGTACAACCAGGCCGTCGCCGCCGTTCGTCCCGGCCAGGCCAGCGACGCCGCCACC AACCAGGGCATCGCCGTCACCCAGACCTCCGTGCCCGGCGGCCGCATCATCACCGAGTTC GTCGCCGGCCAGGTGGTGGGGCAGTACTCCGTCGCCGACCAGGCGGTGGAGCAGGACGCG ACCAAGATAACCGTGGGCGAGGCGCTGGAGGCGACGGCGCTGGCCGCGGGCGAACGTCCG GTGGACAGGACGGACGTGGAGGCCATCCGCGCGGCGGAGATGGCGGCGCAAGGGTCCGAC GTGACCATGCCCGGCGGCCTCGCCGACCAGGCGCAGGCGGCGGCGCGCTCCAACGCCGAC GCCGACCGCGACGACGACAAGATCACGGTGGGCGATGTCCTCACGGACGCGACGGCGAAG CTGGCGGGGGACAAGGTGGCGGGGGCAGAGGACGCGGCGAAGGTTGTGCAGGCGGAGACG TACAGCGACGCCGCAGCGCGGACCAGGGCCGGCGGGGTGGGCGCCGCGGTGTCCACGGCG GCGAGGCTCAACCAAGCCGACGACGACGCCGATGACGACGCTGAGTGAACCAGTCCCCTG TACTTTTTTGTGGTATCACTGTGCCGGCCCGTACACAGCTAGTGCGTGTCCCTGTACCTT TTGCGTGTGTATATGCTGCAGTCAGATGAGTCAAGCGTGTGATGTCACCTGTTGCTGTGG ACACAAATAAAGAAGCGAGTGTGGTGGTGTTTCC