Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os06t0340600-02
CDS Infomation	cds chromosome:IRGSP-1.0:6:13601989:13604917:-1 gene:Os06g0340600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to phosphatidylinositol 3- and 4-kinase family protein. (Os06t0340600-01);Similar to phosphatidylinositol 3- and 4-kinase family protein. (Os06t0340600-02);Phosphatidylinositol 3- and 4-kinase, catalytic domain containing protein. (Os06t0340600-03)
Sequence	ATGTCGTCTGCTGCCATTGCCATTAGCCCGATGGTGGAAGAGTTTGCTCTCCTGCCCATC TGCTTCGACGGCAGCCGGTCGCCCCACTGTTTGTCCGGGTCACAGCTGCAGGATTCGATT ATCATCTTTCTTGCTGTGCCTGGTGCCCCACCGATGCCGATGAGTGTGCTCGGCTCGGAG TCCATCGCCTCGGTCAAGCTGCGCATTCAGCGGTTCAAGGGGTTCGTGGTTAACAAGCAG AGGCTTGTGCTTGATGGGCACGAGCTGGCAAGGAACAACTGCCATGTGAAGGATTATGGG CTTGCCGATGGAAATGTTCTGCACCTTGTTATCCGCTTGGCTGATCTTCGCTTGATTAAC ATCGAGACTACCAGTGGAAAGAAGTTTCAGTTCCAGGTGGACCAGAGCCGCAATGTCAAG TATCTCAAGAGTAAGCTGGCAGTGGAGGGAGATGAGGACCTTGGTGAGGATCACAAGCTT GAATGTGATGGCAAGGAGCTTGAGGACCACCAGCTGATTGCTGATATTAGCAAGAAGGAT GATGCTGTGATCCATTTGTTCATCCGCAAGCCAGCAAAGTTACGGACACAGCAAGTTGAT AAAGACACGGTGGTTACAGTTGTCACTCCGCAGGAGAAAGAGAACCTTCAAAATGAAGCT CATGCTGTGAACCCTGCTAAACCAGCTGGTGCTAGGCCTGCTCTTGTTGAACCAATTATC GTTAACCACAAGGTGAAGCTATCACTTGAAGTGATGAGAATGATTAGCTCAGCCATAGCT GGTCTTGAGAATGGATACTTGCCAGTGATGTCAGCTGAAGGTTCAGGGGGTGTTTACTTC ATGCAAGATGCATCAGGAGAGAAGAATATTGCAGTGTTTAAGCCCAGAGATGAGGAACCT ATGGCTAAAAACAACCCAAGAGGGCTTCCAGTGTCGACTGATGGAGAAGGCATGAAGAGG GGGACACTTGTAGGGGAAGGTGCATTTAGGGAAGTTGCTGCTTATATTCTTGACCATCCA ATTGGTGATCATGAATCTGAAGAACGTATCGGGTTCTCTGGTGTGCCTCCCACAGCATTG GTCCGGAGCTTACACAGGGGGAAGAGCTTCAAGATTGGATCACTGCAGATGTTCATTCAG AACAATGGAAGTTGTGAGGATATGGGTCCCCGAGCATTTCCAGTGAAGGAGGTCCACAAA ATAGCAGTGTTAGATCTTAGGTTAGCAAACGCTGATCGTCATGCAGGGAACATTTTAGTG TGCAAGGATGAAGAAGGTGGCAATTACAAGTTGGTTCCAATTGATCATGGTTACTGCTTG CCAGAGAAGTTTGAAGATTGTACCTTTGAGTGGCTGTACTGGCCCCAGGCTCGTGAACCA TTCAGTGATGAAACCATTGCATACATCAAATCACTAGACGCTGAAGAGGACATCAAGCTT CTCAAGTTCCATGGGTGGGAGCTGTCTGCAAGATGTGCTCGTGTCCTGTGCATCAGCACC ATGCTTTTAAAGAAAGGTGCAGCACGAGGCCTCACACCGTATGACATCGGGCGTATACTG TGCAGGGAAACTGTGAATAGAGACTCTGAGATTGAGGACATCGTCCAGGAAGCCGAGGGC CATGTTCTCCCAGGGTCAAGTGAAGTAATCTTCTTAGAAACCGTATCTGAAATCATAGAC CGTCACCTCGACAAGAAGTTCGCTTAG

Peptide Sequence

PEP ID	Os06t0340600-02
PEP Infomation	pep chromosome:IRGSP-1.0:6:13601989:13604917:-1 gene:Os06g0340600 transcript:Os06t0340600-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to phosphatidylinositol 3- and 4-kinase family protein. (Os06t0340600-01);Similar to phosphatidylinositol 3- and 4-kinase family protein. (Os06t0340600-02);Phosphatidylinositol 3- and 4-kinase, catalytic domain containing protein. (Os06t0340600-03)
Sequence	MSSAAIAISPMVEEFALLPICFDGSRSPHCLSGSQLQDSIIIFLAVPGAPPMPMSVLGSE SIASVKLRIQRFKGFVVNKQRLVLDGHELARNNCHVKDYGLADGNVLHLVIRLADLRLIN IETTSGKKFQFQVDQSRNVKYLKSKLAVEGDEDLGEDHKLECDGKELEDHQLIADISKKD DAVIHLFIRKPAKLRTQQVDKDTVVTVVTPQEKENLQNEAHAVNPAKPAGARPALVEPII VNHKVKLSLEVMRMISSAIAGLENGYLPVMSAEGSGGVYFMQDASGEKNIAVFKPRDEEP MAKNNPRGLPVSTDGEGMKRGTLVGEGAFREVAAYILDHPIGDHESEERIGFSGVPPTAL VRSLHRGKSFKIGSLQMFIQNNGSCEDMGPRAFPVKEVHKIAVLDLRLANADRHAGNILV CKDEEGGNYKLVPIDHGYCLPEKFEDCTFEWLYWPQAREPFSDETIAYIKSLDAEEDIKL LKFHGWELSARCARVLCISTMLLKKGAARGLTPYDIGRILCRETVNRDSEIEDIVQEAEG HVLPGSSEVIFLETVSEIIDRHLDKKFA

Transcript Sequence

Transcript ID	Os06t0340600-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:6:13601989:13604917:-1 gene:Os06g0340600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to phosphatidylinositol 3- and 4-kinase family protein. (Os06t0340600-01);Similar to phosphatidylinositol 3- and 4-kinase family protein. (Os06t0340600-02);Phosphatidylinositol 3- and 4-kinase, catalytic domain containing protein. (Os06t0340600-03)
Sequence	ATTTCCCCTCCCTCTCTCTCTGAATTTCTTTCTCCCCAAACCAAAACCAAACCGAAGCTT CCCCATCTCGCGTGAACTTCGGAGCAAGGAAGAACAAGGCGCCGCGCCGGATTTAGCCCC GCCCCCCTCTCCGGGGTATCCCCCCTCCTCTCCTCTGGGTTTGATTGGAGTGAGGTGAAT CGGTGAGGTTGTGGCTCGGTTGGCGTCCGGATCGGAGGGGGTTCGGGCCCTTCCTGATTA ATCCCTCTTCTGATTCCGTGTGGGGGATTCAATCACTGGTGGGCAAAGGCGAGATATTTC GTCACTTCTCCCCCTCATCTAACCATGTCTGGTTTGATGTGCCTGGAGATCAAGATGGGA TTGTAACCACGCTGGTTATCTCGCGATCGCAGAGGGTTTCCTCCATCCTCTAAGGAAGGA AAGGAACCCTTGCCCTTTCTTCTCCATGGCTTCTAATTCGTAGTGTGAAGGATCTGATTT TTAGGTTAGTGTAAATAGTAGCAGTAGTTGAGGAAGCTTCGGCATCCTAAGGACCTCCTG TGAAGATGTCGTCTGCTGCCATTGCCATTAGCCCGATGGTGGAAGAGTTTGCTCTCCTGC CCATCTGCTTCGACGGCAGCCGGTCGCCCCACTGTTTGTCCGGGTCACAGCTGCAGGATT CGATTATCATCTTTCTTGCTGTGCCTGGTGCCCCACCGATGCCGATGAGTGTGCTCGGCT CGGAGTCCATCGCCTCGGTCAAGCTGCGCATTCAGCGGTTCAAGGGGTTCGTGGTTAACA AGCAGAGGCTTGTGCTTGATGGGCACGAGCTGGCAAGGAACAACTGCCATGTGAAGGATT ATGGGCTTGCCGATGGAAATGTTCTGCACCTTGTTATCCGCTTGGCTGATCTTCGCTTGA TTAACATCGAGACTACCAGTGGAAAGAAGTTTCAGTTCCAGGTGGACCAGAGCCGCAATG TCAAGTATCTCAAGAGTAAGCTGGCAGTGGAGGGAGATGAGGACCTTGGTGAGGATCACA AGCTTGAATGTGATGGCAAGGAGCTTGAGGACCACCAGCTGATTGCTGATATTAGCAAGA AGGATGATGCTGTGATCCATTTGTTCATCCGCAAGCCAGCAAAGTTACGGACACAGCAAG TTGATAAAGACACGGTGGTTACAGTTGTCACTCCGCAGGAGAAAGAGAACCTTCAAAATG AAGCTCATGCTGTGAACCCTGCTAAACCAGCTGGTGCTAGGCCTGCTCTTGTTGAACCAA TTATCGTTAACCACAAGGTGAAGCTATCACTTGAAGTGATGAGAATGATTAGCTCAGCCA TAGCTGGTCTTGAGAATGGATACTTGCCAGTGATGTCAGCTGAAGGTTCAGGGGGTGTTT ACTTCATGCAAGATGCATCAGGAGAGAAGAATATTGCAGTGTTTAAGCCCAGAGATGAGG AACCTATGGCTAAAAACAACCCAAGAGGGCTTCCAGTGTCGACTGATGGAGAAGGCATGA AGAGGGGGACACTTGTAGGGGAAGGTGCATTTAGGGAAGTTGCTGCTTATATTCTTGACC ATCCAATTGGTGATCATGAATCTGAAGAACGTATCGGGTTCTCTGGTGTGCCTCCCACAG CATTGGTCCGGAGCTTACACAGGGGGAAGAGCTTCAAGATTGGATCACTGCAGATGTTCA TTCAGAACAATGGAAGTTGTGAGGATATGGGTCCCCGAGCATTTCCAGTGAAGGAGGTCC ACAAAATAGCAGTGTTAGATCTTAGGTTAGCAAACGCTGATCGTCATGCAGGGAACATTT TAGTGTGCAAGGATGAAGAAGGTGGCAATTACAAGTTGGTTCCAATTGATCATGGTTACT GCTTGCCAGAGAAGTTTGAAGATTGTACCTTTGAGTGGCTGTACTGGCCCCAGGCTCGTG AACCATTCAGTGATGAAACCATTGCATACATCAAATCACTAGACGCTGAAGAGGACATCA AGCTTCTCAAGTTCCATGGGTGGGAGCTGTCTGCAAGATGTGCTCGTGTCCTGTGCATCA GCACCATGCTTTTAAAGAAAGGTGCAGCACGAGGCCTCACACCGTATGACATCGGGCGTA TACTGTGCAGGGAAACTGTGAATAGAGACTCTGAGATTGAGGACATCGTCCAGGAAGCCG AGGGCCATGTTCTCCCAGGGTCAAGTGAAGTAATCTTCTTAGAAACCGTATCTGAAATCA TAGACCGTCACCTCGACAAGAAGTTCGCTTAGAAACCCAGAATAACTGATCTAGTTGTTC AGCTGTATCCAGTCAGTTTGGTGTAAGTATGTTGACAAGCCACTCTTCAATGGACTAAAT GATTTCATTTGTTTGTAGCATCTCAAACCTTCAAGTGCATTACCTACATACATTTTGTGA ATATGTAAGCATGTGTTGTGTGTTGGTCGTGCGCATCATCAGCATGGTACTGTCTGAGAG ACGAAATAAAATGTTGATTTAGTGCTGTT