Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os06t0338900-01
CDS Infomation	cds chromosome:IRGSP-1.0:6:13514718:13521719:-1 gene:Os06g0338900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Bacterial transferase hexapeptide repeat domain containing protein. (Os06t0338900-01)
Sequence	ATGGACTTCCAGGTCGTCGTCCTCGCCGGGGGCACCTCCGAGAAGCTCTCGCCCCTCGTC TCCAAGGATGTCCCCAAGGCGCTCCTCCCCGTCGCCAACCGCCCCGTGCTCTCCTACGTG CTCGACCTCCTCGAGGCCAGCGACCTCAAGGACATCATCGTGGTGGTGGAGGGGCAGGAG GCCGCGCGACTCGTCGGAGCTTGGGCCTCGAGCGCCTACCTAGACCGCCTTCTCGTGGAG GTTGTGGCAGTTCCAGAGGACATTGGAACAGCTGGTGCACTACGAGCTATTTCAAAGCGA CTGACTGCAAATGATGTTTTGGTGATTAGCGGCGACCTAGTAACTGATGTACTTCCTGGG GCTGTTGCTGCTACTCATAGAAGAAATGGTGCCGCTGTTACTGCTTTACTATGTTCTGTT CCTATCAGTGGTCCTTCAGATGCTGCTTCTTCTGGAGGGAAAGATAAAGCTAAAAAACCA ACTCGACTGAATATAGTTGGGCTAGACATAACAAGGCAATTCTTGTTGCATATTGTATCA GGAACCGATGTTGAAAAAGATGTACGTGTTTACAAGCGAAAAATCCGAGCTGTAGGCGAG ATGGAAATTCGAAGTGATCTGATGGATGCACATCTGTATGCTTTTAAGAGGACAACATTA CAGAATATACTGGAAGAGAAAGAATCATACCGTAGCATTAGACTTGAAGTCCTACCATAC TTAGTGAGGAGTCAGTTGAAATCATCTTCATCAGGAGGTGAGGGAACAACCGTTGATGAA ACTGGCGATACTACAGTTCCATCCAATAGTCATTTGCAGTGTCTATCACAGCATCGCATA CTTGCACCATCTGCTTTTAAGAAAGATTTGTTATCATCTGGAGGAACATATAGGTGCTGT GTCTATATTGCTACTAAAAGCAAGTACTGTCATCGTTTGAACTCCATTCAGGCATACTGT GATATCAACCGAGATGTTGTAGGGGATGCTAGTCACTTGTCCGGTTATTCCTTCTCTGCA CAGAACAACATCATCCATCCAACTTCTGTGCTTGGATCGAAGACTACAATCGGACCACAA TGCATGCTTGCTGAGGGTTCACAATTAGGTGACAAATGTAGTGTGAAGCGATCTGTTATT GGCCGTCATTGTCGAATTGGTTCAAATGTAAAGATTGTCAATTCTGTCGTGATGAACCAT GTGGTTATTGAAGATGGTTGTCACATACAAGGTTCTGTGATATGCAATAATGTGCAACTT CAAGAACGTGCTGTTTTGAAAGATTGTCAGGTTGGTGCTGGTTATATTGTAACTGCTAGC AGTGAACACAAAGCAGAATCTCTCAGCAAGAAAGTAGAGCGATTTTGA

Peptide Sequence

PEP ID	Os06t0338900-01
PEP Infomation	pep chromosome:IRGSP-1.0:6:13514718:13521719:-1 gene:Os06g0338900 transcript:Os06t0338900-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Bacterial transferase hexapeptide repeat domain containing protein. (Os06t0338900-01)
Sequence	MDFQVVVLAGGTSEKLSPLVSKDVPKALLPVANRPVLSYVLDLLEASDLKDIIVVVEGQE AARLVGAWASSAYLDRLLVEVVAVPEDIGTAGALRAISKRLTANDVLVISGDLVTDVLPG AVAATHRRNGAAVTALLCSVPISGPSDAASSGGKDKAKKPTRLNIVGLDITRQFLLHIVS GTDVEKDVRVYKRKIRAVGEMEIRSDLMDAHLYAFKRTTLQNILEEKESYRSIRLEVLPY LVRSQLKSSSSGGEGTTVDETGDTTVPSNSHLQCLSQHRILAPSAFKKDLLSSGGTYRCC VYIATKSKYCHRLNSIQAYCDINRDVVGDASHLSGYSFSAQNNIIHPTSVLGSKTTIGPQ CMLAEGSQLGDKCSVKRSVIGRHCRIGSNVKIVNSVVMNHVVIEDGCHIQGSVICNNVQL QERAVLKDCQVGAGYIVTASSEHKAESLSKKVERF

Transcript Sequence

Transcript ID	Os06t0338900-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:6:13514718:13521719:-1 gene:Os06g0338900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Bacterial transferase hexapeptide repeat domain containing protein. (Os06t0338900-01)
Sequence	AAACGATCTCTCCTCCTTCCCTAGTCCAGACTCCCGACGCGACCAAGCGCCGCCGTCGCC GACGCTTCCCCGCCGTCGGAGATGGACTTCCAGGTCGTCGTCCTCGCCGGGGGCACCTCC GAGAAGCTCTCGCCCCTCGTCTCCAAGGATGTCCCCAAGGCGCTCCTCCCCGTCGCCAAC CGCCCCGTGCTCTCCTACGTGCTCGACCTCCTCGAGGCCAGCGACCTCAAGGACATCATC GTGGTGGTGGAGGGGCAGGAGGCCGCGCGACTCGTCGGAGCTTGGGCCTCGAGCGCCTAC CTAGACCGCCTTCTCGTGGAGGTTGTGGCAGTTCCAGAGGACATTGGAACAGCTGGTGCA CTACGAGCTATTTCAAAGCGACTGACTGCAAATGATGTTTTGGTGATTAGCGGCGACCTA GTAACTGATGTACTTCCTGGGGCTGTTGCTGCTACTCATAGAAGAAATGGTGCCGCTGTT ACTGCTTTACTATGTTCTGTTCCTATCAGTGGTCCTTCAGATGCTGCTTCTTCTGGAGGG AAAGATAAAGCTAAAAAACCAACTCGACTGAATATAGTTGGGCTAGACATAACAAGGCAA TTCTTGTTGCATATTGTATCAGGAACCGATGTTGAAAAAGATGTACGTGTTTACAAGCGA AAAATCCGAGCTGTAGGCGAGATGGAAATTCGAAGTGATCTGATGGATGCACATCTGTAT GCTTTTAAGAGGACAACATTACAGAATATACTGGAAGAGAAAGAATCATACCGTAGCATT AGACTTGAAGTCCTACCATACTTAGTGAGGAGTCAGTTGAAATCATCTTCATCAGGAGGT GAGGGAACAACCGTTGATGAAACTGGCGATACTACAGTTCCATCCAATAGTCATTTGCAG TGTCTATCACAGCATCGCATACTTGCACCATCTGCTTTTAAGAAAGATTTGTTATCATCT GGAGGAACATATAGGTGCTGTGTCTATATTGCTACTAAAAGCAAGTACTGTCATCGTTTG AACTCCATTCAGGCATACTGTGATATCAACCGAGATGTTGTAGGGGATGCTAGTCACTTG TCCGGTTATTCCTTCTCTGCACAGAACAACATCATCCATCCAACTTCTGTGCTTGGATCG AAGACTACAATCGGACCACAATGCATGCTTGCTGAGGGTTCACAATTAGGTGACAAATGT AGTGTGAAGCGATCTGTTATTGGCCGTCATTGTCGAATTGGTTCAAATGTAAAGATTGTC AATTCTGTCGTGATGAACCATGTGGTTATTGAAGATGGTTGTCACATACAAGGTTCTGTG ATATGCAATAATGTGCAACTTCAAGAACGTGCTGTTTTGAAAGATTGTCAGGTTGGTGCT GGTTATATTGTAACTGCTAGCAGTGAACACAAAGCAGAATCTCTCAGCAAGAAAGTAGAG CGATTTTGATAGTGTGGTTGACCTTGAACAATTTTGTTTGCTAAGTCAGATACAGCCGTA CAAGGAGTTAAGAAGGGAGGGGGTAACATGTATTTCGAAAAAATGATTTCACCGTGATAC CCCAAAAAATAGTGTGCTCTTGTCTATTCTAACAGATTGAGCTTGGACTTGACAGTTGAA GCGCTTCTAGCGAGATTGATCCATGATATTATGAGTAAACTATGTGTATCCGTTTGTTGG CCCTGTTCCTGTTATTGATTTGTAATTTTCTTGTCAATTTGGGTGGTACAGTAATTCATT TGGTACACCAAGGTGGTTCTTGTCGCTATTTTGTAATACATTATGTTAGCTTTGGGCGGC TTACTCCCTCC