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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os06t0332800-01
CDS Infomation

cds chromosome:IRGSP-1.0:6:13196376:13198623:-1 gene:Os06g0332800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Bundle sheath defective protein 2. (Os06t0332800-01)
Sequence

ATGGCGGCCACCTCGAGCCTCACGGCGACCGCCGCCTCCCCTCCGCTCCTCCTCAAACCC
GCCCCTTCCCCGCTCGCTGCCTCCTTTCTCCGGCCCGTCTCTCGCTTCTCCAGGTTCCAG
TCCGTCAAGACCAAGGCCACAGAAAATGATCAGACCGAAAAGAGTCCTCCGAAGGGAAGC
AGCCTTGTCTGCCAGGACTGCGAAGGAAACGGTGCAATAGTGTGCAACCAGTGCAAGGGA
GATGGGGTGAATTCTGTCGATCACTTCAACGGCCGATTTAAAGCTGGAGCATTATGCTGG
CTTTGCAGAGGAAAGCGGGAAATCTTGTGCGGTAGCTGCAATGGTGCTGGCTTCTTAGGT
GGATTCATGAGTACTTCCGATTCAACTGCAGAGTAG

Peptide Sequence

PEP ID

Os06t0332800-01
PEP Infomation

pep chromosome:IRGSP-1.0:6:13196376:13198623:-1 gene:Os06g0332800 transcript:Os06t0332800-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Bundle sheath defective protein 2. (Os06t0332800-01)
Sequence

MAATSSLTATAASPPLLLKPAPSPLAASFLRPVSRFSRFQSVKTKATENDQTEKSPPKGS
SLVCQDCEGNGAIVCNQCKGDGVNSVDHFNGRFKAGALCWLCRGKREILCGSCNGAGFLG
GFMSTSDSTAE

Transcript Sequence

Transcript ID

Os06t0332800-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:6:13196376:13198623:-1 gene:Os06g0332800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Bundle sheath defective protein 2. (Os06t0332800-01)
Sequence

TTTTGGCCGTCCATCTCTCCTCTCCTCGCTCTCGCTCGCTCGCTCTCTCGCTCGCTGCTC
CCAAATGGCGGCCACCTCGAGCCTCACGGCGACCGCCGCCTCCCCTCCGCTCCTCCTCAA
ACCCGCCCCTTCCCCGCTCGCTGCCTCCTTTCTCCGGCCCGTCTCTCGCTTCTCCAGGTT
CCAGTCCGTCAAGACCAAGGCCACAGAAAATGATCAGACCGAAAAGAGTCCTCCGAAGGG
AAGCAGCCTTGTCTGCCAGGACTGCGAAGGAAACGGTGCAATAGTGTGCAACCAGTGCAA
GGGAGATGGGGTGAATTCTGTCGATCACTTCAACGGCCGATTTAAAGCTGGAGCATTATG
CTGGCTTTGCAGAGGAAAGCGGGAAATCTTGTGCGGTAGCTGCAATGGTGCTGGCTTCTT
AGGTGGATTCATGAGTACTTCCGATTCAACTGCAGAGTAGTGTGAATGGTTTATATTCTT
CTTTTGGTTTGTGTTTGTATTTTGTATTTGAGCAATTTTGAGGAATCTGTAATATTTCCA
CTTTGTGTCATCTTGAACAATTTGTGCTCCAGGATTGGGGCAATTTCAGGCACCAAAGCG
TATAACTCTGTATTATGTCACTACTAGAAGTATCTTATTGCTCTCAGCCTCTCATAACGA
AAGAAACTTAGTTTGGGAACTTATTATGATGAATATTAATTTGTACTGTGTTTTCATGTG
GCGTAAACATGGGAAGTTGGGAACCCAGCCACAATTTGGATTGTGC