Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os06t0331900-01
CDS Infomation	cds chromosome:IRGSP-1.0:6:13143806:13146065:1 gene:Os06g0331900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Uncharacterised protein family UPF0005 domain containing protein. (Os06t0331900-01)
Sequence	ATGGTGGCCGCCGGCGAGGCAGGTCAGCACCACGAGTCCGGCGGCGCGGAGTGGAGGGTG ACGGTGGCGGAGGCGCCGGAGGCGGAGGTGGAGCATGAGAACGCGAAAGGCGCGCGGCGG GGGTGCTGCTGCGCCCCGGCGGCGGCGGCGTGGGTGCTGTGGTGGCTGGCCGCGCCGTGG AAGTGGGTGGCCAGGTTCGGGAGGACGGCGTGGAAGGTCGGCGCCGACGACCCGAGGAGG GTGGTGCACGGGTTCAAGGTGGCGCTGGCGCTTACCTTGTGCTCCGCCTTCTACTACGTC CGCCCGCTCTACGTCTTCACCGGCCAGACCGCCATGTGGGCCGTCCTCACCGTCGTCGTC GTCTTCGAGTACACCGTCGGCGGCTGCATGTACAAGGGGCTGAACAGGGCGATGGCGACG GTGGCCGGCGGCGCGCTGGCGCTCGGCGTGCACTGGGTCGCCGACAAGTCTGGCGACGAC GCGGAGCCGTTCGTCCTCACCGCCTCGCTCTTCGTGCTGGCCGCGGCGGCGTCCTTCTCC CGCTTCATCCCCACGCTCAAGGCGCGGTTCGACTACGGCGTCACCATCTTCATCCTCACC TACAGCCTCGTCGCCGTGTCGGGGTACCGCGTCGACACGCTGGTCACCATGGCGCAGCAG CGCCTCATCACCATCGCCATCGGAGCGTTCATCTGCTTCGCCGTCTGCACGCTCGTCTTC CCGGTCTGGGCCGGGCAGGAGCTGCACGTCCTCGTCGCGCGCAACATGGACAAGCTCGCC GCCGCCATCGAGGCCTGCGTCGACGACTACTTCTCCTCCGCCGAGCACGCTGGCGGTGGC GGCGACGCCGCCACGGCGCTGTCGGAGAAGGCGCGCGGGTACAGGGCTGTGCTTAACGCC AAGGCGTCGGAGGACTCGCTGGCGAACCTGGCGAGGTGGGAGCCCGGCCATGGCAAGTTC GGCTTCCGCCACCCGTACGGCCAGTACCAGAATGTCGGCGCCGCCATGCGCTGCTGCGCC TACTGCATCGACGCCCTCGCGGCCTGCGTCGGCGCGGGCGGGCAGGCGCCGGCGCACGTC AAGAGGCACCTCGCCGGCGCCTGCGTCGCCCTGAGCCAGCACTGCGCCGCCGTGCTCCGC GAGGCGTCGGGCTCCGTCACGTCCATGACGCGGTCCGGCCGCCTCGCCCTCGTCGTCGGG GACATGAACGCCGCCGCCCAAGACCTGAGGAACGAGCTGAGATGCCTCGCCGAGATACTG GACGACGACGAAGAAGAAGAAGCCGCGTCATCAGAGGCAGAGCAGCACGAGCACAACACC GCGCCGCCGCCGCCGCCGCCGCTCATCGAGGCGCTGCCGCTCTTCACCGCCGCCTCTCTC CTGCTTGAGATATCCACTAGAGCGGAGGGGGTCGTCGCCGCCGTGGACGCCCTGGGCACC ACGGCGAAGTTCAAGAAAGCCGACCACGCCGAACCACCAGCAACCACAACGCTCGACGCC GAGGCGGCCATGCCCGTACCCAACTCCAACGCCATCGCCGCAGACGAGGCGCACGGCAAT GCCACCGCCGGCGAGCATGACAAGAAGGAGACGGCGGAGCAGACGACGACGACGAGCGCG AGCACCGTGGGGCAGCAGCAAGAGGCGCGGGACCAGGTGGGACAGCTGGTGAAGCTGCTG ATGCGGAGGCGGAGCACCAAGAAGTGGGCGCGCGGCGAGCCCAAGGTGGGCCCGTGCCCG AGGCCGCCGCTGGACTTCCCGCCGGTCCACGCGCCCAGCCCGAGGAGCCGGTCCACGGAG CTCGCCGGCCACCCGCCGGTGGTGCCCAGCCCGAGGCACCGGTCCATGGACCTGGCGAGC CACGGGCTCGCGCTGCCGAGCTCGAGACACCGGTCCATGGACCTCGCAAGCCATGGGCCC GTGCTGCCGAGCCCAAGGAACAGGTCCATGGACTTCACGGCCCACGCGCCGAGCCCGAGA AACCGATCCATTCTTGGGATGGCTTGA

Peptide Sequence

PEP ID	Os06t0331900-01
PEP Infomation	pep chromosome:IRGSP-1.0:6:13143806:13146065:1 gene:Os06g0331900 transcript:Os06t0331900-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Uncharacterised protein family UPF0005 domain containing protein. (Os06t0331900-01)
Sequence	MVAAGEAGQHHESGGAEWRVTVAEAPEAEVEHENAKGARRGCCCAPAAAAWVLWWLAAPW KWVARFGRTAWKVGADDPRRVVHGFKVALALTLCSAFYYVRPLYVFTGQTAMWAVLTVVV VFEYTVGGCMYKGLNRAMATVAGGALALGVHWVADKSGDDAEPFVLTASLFVLAAAASFS RFIPTLKARFDYGVTIFILTYSLVAVSGYRVDTLVTMAQQRLITIAIGAFICFAVCTLVF PVWAGQELHVLVARNMDKLAAAIEACVDDYFSSAEHAGGGGDAATALSEKARGYRAVLNA KASEDSLANLARWEPGHGKFGFRHPYGQYQNVGAAMRCCAYCIDALAACVGAGGQAPAHV KRHLAGACVALSQHCAAVLREASGSVTSMTRSGRLALVVGDMNAAAQDLRNELRCLAEIL DDDEEEEAASSEAEQHEHNTAPPPPPPLIEALPLFTAASLLLEISTRAEGVVAAVDALGT TAKFKKADHAEPPATTTLDAEAAMPVPNSNAIAADEAHGNATAGEHDKKETAEQTTTTSA STVGQQQEARDQVGQLVKLLMRRRSTKKWARGEPKVGPCPRPPLDFPPVHAPSPRSRSTE LAGHPPVVPSPRHRSMDLASHGLALPSSRHRSMDLASHGPVLPSPRNRSMDFTAHAPSPR NRSILGMA

Transcript Sequence

Transcript ID	Os06t0331900-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:6:13143806:13146065:1 gene:Os06g0331900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Uncharacterised protein family UPF0005 domain containing protein. (Os06t0331900-01)
Sequence	ATTCCAAGGTGAGAGGTGAGCTTCATTGATCGAACAGAGGCAACCAACCACAGCAACACA AAGGTCATCGCCTAGCCCAGCAATGGTGGCCGCCGGCGAGGCAGGTCAGCACCACGAGTC CGGCGGCGCGGAGTGGAGGGTGACGGTGGCGGAGGCGCCGGAGGCGGAGGTGGAGCATGA GAACGCGAAAGGCGCGCGGCGGGGGTGCTGCTGCGCCCCGGCGGCGGCGGCGTGGGTGCT GTGGTGGCTGGCCGCGCCGTGGAAGTGGGTGGCCAGGTTCGGGAGGACGGCGTGGAAGGT CGGCGCCGACGACCCGAGGAGGGTGGTGCACGGGTTCAAGGTGGCGCTGGCGCTTACCTT GTGCTCCGCCTTCTACTACGTCCGCCCGCTCTACGTCTTCACCGGCCAGACCGCCATGTG GGCCGTCCTCACCGTCGTCGTCGTCTTCGAGTACACCGTCGGCGGCTGCATGTACAAGGG GCTGAACAGGGCGATGGCGACGGTGGCCGGCGGCGCGCTGGCGCTCGGCGTGCACTGGGT CGCCGACAAGTCTGGCGACGACGCGGAGCCGTTCGTCCTCACCGCCTCGCTCTTCGTGCT GGCCGCGGCGGCGTCCTTCTCCCGCTTCATCCCCACGCTCAAGGCGCGGTTCGACTACGG CGTCACCATCTTCATCCTCACCTACAGCCTCGTCGCCGTGTCGGGGTACCGCGTCGACAC GCTGGTCACCATGGCGCAGCAGCGCCTCATCACCATCGCCATCGGAGCGTTCATCTGCTT CGCCGTCTGCACGCTCGTCTTCCCGGTCTGGGCCGGGCAGGAGCTGCACGTCCTCGTCGC GCGCAACATGGACAAGCTCGCCGCCGCCATCGAGGCCTGCGTCGACGACTACTTCTCCTC CGCCGAGCACGCTGGCGGTGGCGGCGACGCCGCCACGGCGCTGTCGGAGAAGGCGCGCGG GTACAGGGCTGTGCTTAACGCCAAGGCGTCGGAGGACTCGCTGGCGAACCTGGCGAGGTG GGAGCCCGGCCATGGCAAGTTCGGCTTCCGCCACCCGTACGGCCAGTACCAGAATGTCGG CGCCGCCATGCGCTGCTGCGCCTACTGCATCGACGCCCTCGCGGCCTGCGTCGGCGCGGG CGGGCAGGCGCCGGCGCACGTCAAGAGGCACCTCGCCGGCGCCTGCGTCGCCCTGAGCCA GCACTGCGCCGCCGTGCTCCGCGAGGCGTCGGGCTCCGTCACGTCCATGACGCGGTCCGG CCGCCTCGCCCTCGTCGTCGGGGACATGAACGCCGCCGCCCAAGACCTGAGGAACGAGCT GAGATGCCTCGCCGAGATACTGGACGACGACGAAGAAGAAGAAGCCGCGTCATCAGAGGC AGAGCAGCACGAGCACAACACCGCGCCGCCGCCGCCGCCGCCGCTCATCGAGGCGCTGCC GCTCTTCACCGCCGCCTCTCTCCTGCTTGAGATATCCACTAGAGCGGAGGGGGTCGTCGC CGCCGTGGACGCCCTGGGCACCACGGCGAAGTTCAAGAAAGCCGACCACGCCGAACCACC AGCAACCACAACGCTCGACGCCGAGGCGGCCATGCCCGTACCCAACTCCAACGCCATCGC CGCAGACGAGGCGCACGGCAATGCCACCGCCGGCGAGCATGACAAGAAGGAGACGGCGGA GCAGACGACGACGACGAGCGCGAGCACCGTGGGGCAGCAGCAAGAGGCGCGGGACCAGGT GGGACAGCTGGTGAAGCTGCTGATGCGGAGGCGGAGCACCAAGAAGTGGGCGCGCGGCGA GCCCAAGGTGGGCCCGTGCCCGAGGCCGCCGCTGGACTTCCCGCCGGTCCACGCGCCCAG CCCGAGGAGCCGGTCCACGGAGCTCGCCGGCCACCCGCCGGTGGTGCCCAGCCCGAGGCA CCGGTCCATGGACCTGGCGAGCCACGGGCTCGCGCTGCCGAGCTCGAGACACCGGTCCAT GGACCTCGCAAGCCATGGGCCCGTGCTGCCGAGCCCAAGGAACAGGTCCATGGACTTCAC GGCCCACGCGCCGAGCCCGAGAAACCGATCCATTCTTGGGATGGCTTGACGCATCGAACG GACGCATCGCATTGAAAGTGTGGCAAAGAGCCAAAGACAGCACGAGTGTGTGTTTTTTTC TGTCTGACACGACTGACGGAGTTGAAGCAGTAGTTGTGATGTTTCGCACAGATGTAAACT TGCTGTTGATGATAATAATGAACATGACAAACTACACTAC