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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os06t0326500-01
CDS Infomation

cds chromosome:IRGSP-1.0:6:12801432:12804021:1 gene:Os06g0326500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Mitochondrial glycoprotein family protein. (Os06t0326500-01);Similar to mitochondrial glycoprotein. (Os06t0326500-02)
Sequence

ATGTCGTCGTCGGCGTCGCGCGCCGCCAGCCTCCTCCGCCGCACATCCTCCGCCCTGTCC
CGCCGCTGCGCCCACTCCTCCTCCGCCGCCGCGCCGTCCCGCCCGCCCGTTCCGCTCCCA
CGTTTCCGCGCCGCCGCCGCCGCCGCCTCCTCCTCGCCGTCCTCTGGGATCACCTCCCGC
CGCTTCCTCGCGTCGAAATCCCCGTCGTCGTCGTCGCCCTCCAAGGCCTCCGCCGACGAG
AACCTGGTGCGGGTCATCGACTCCGAGATCGAGTGCATTGTTCAGTCGGAGGAGGGCGCC
GCCTCCGCGAAGCAAATTGATCTACCAGAAGACTTCCCTTTTGAGATAATCGACAATCCT
GGTGACCAATCCATAACACTCAAAAGAGAAATTGCAGGAGAGACTATTAAAGCTACTGTC
TACACAAACTTTGATACACAAGATTTGAATGAGGATGGCGATGATAATGAGAACAATGAG
GAATCTTTTAAGCCAGCAATCCAGATGGTCGTCACTGTTGAGAAACCAGAAGCCTCCATC
TTGGAATTTGAATGCCACTTCAATGATGATGAACTGGCAATTGAAAGTATGAGGATGCTG
GATCAAAATAATAGTGATGCGGAGAATTTGTATGTGGGACCGACATTTCAGGATCTTGAT
GAGAGCTTGCAGAAGGCCTTGCACCGGTATCTCGAAGTGAGGGGAATCAAGCACTCACTG
CATGACTGGCTGTGCGAGTACATGATGAGCAAGGATGAGAAGGAGTATCTGGTTTGGTTG
AAGAGCATGAAAGAATTCGTTGGGAATTGA

Peptide Sequence

PEP ID

Os06t0326500-01
PEP Infomation

pep chromosome:IRGSP-1.0:6:12801432:12804021:1 gene:Os06g0326500 transcript:Os06t0326500-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Mitochondrial glycoprotein family protein. (Os06t0326500-01);Similar to mitochondrial glycoprotein. (Os06t0326500-02)
Sequence

MSSSASRAASLLRRTSSALSRRCAHSSSAAAPSRPPVPLPRFRAAAAAASSSPSSGITSR
RFLASKSPSSSSPSKASADENLVRVIDSEIECIVQSEEGAASAKQIDLPEDFPFEIIDNP
GDQSITLKREIAGETIKATVYTNFDTQDLNEDGDDNENNEESFKPAIQMVVTVEKPEASI
LEFECHFNDDELAIESMRMLDQNNSDAENLYVGPTFQDLDESLQKALHRYLEVRGIKHSL
HDWLCEYMMSKDEKEYLVWLKSMKEFVGN

Transcript Sequence

Transcript ID

Os06t0326500-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:6:12801432:12804021:1 gene:Os06g0326500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Mitochondrial glycoprotein family protein. (Os06t0326500-01);Similar to mitochondrial glycoprotein. (Os06t0326500-02)
Sequence

GAAATTGATTTCGTCACCGCCGAATCCCCCAGCAGCCAGCCATGTCGTCGTCGGCGTCGC
GCGCCGCCAGCCTCCTCCGCCGCACATCCTCCGCCCTGTCCCGCCGCTGCGCCCACTCCT
CCTCCGCCGCCGCGCCGTCCCGCCCGCCCGTTCCGCTCCCACGTTTCCGCGCCGCCGCCG
CCGCCGCCTCCTCCTCGCCGTCCTCTGGGATCACCTCCCGCCGCTTCCTCGCGTCGAAAT
CCCCGTCGTCGTCGTCGCCCTCCAAGGCCTCCGCCGACGAGAACCTGGTGCGGGTCATCG
ACTCCGAGATCGAGTGCATTGTTCAGTCGGAGGAGGGCGCCGCCTCCGCGAAGCAAATTG
ATCTACCAGAAGACTTCCCTTTTGAGATAATCGACAATCCTGGTGACCAATCCATAACAC
TCAAAAGAGAAATTGCAGGAGAGACTATTAAAGCTACTGTCTACACAAACTTTGATACAC
AAGATTTGAATGAGGATGGCGATGATAATGAGAACAATGAGGAATCTTTTAAGCCAGCAA
TCCAGATGGTCGTCACTGTTGAGAAACCAGAAGCCTCCATCTTGGAATTTGAATGCCACT
TCAATGATGATGAACTGGCAATTGAAAGTATGAGGATGCTGGATCAAAATAATAGTGATG
CGGAGAATTTGTATGTGGGACCGACATTTCAGGATCTTGATGAGAGCTTGCAGAAGGCCT
TGCACCGGTATCTCGAAGTGAGGGGAATCAAGCACTCACTGCATGACTGGCTGTGCGAGT
ACATGATGAGCAAGGATGAGAAGGAGTATCTGGTTTGGTTGAAGAGCATGAAAGAATTCG
TTGGGAATTGAGTGCCGGTGCGTAATGTTTGTCCCTCATAATTATCCAGAGCTACATTGC
ATAGAAGTCACGTTTGGTGAAAGACCATATGGTGGTTTTATTTGTCATAAATCCTTGCTG
CTGTTACCCAGCACTGTTTGCTACTAGCTAGCTCGCCTTTTATTTAATCCCTTTGATCTT
TGGATGATTGTGATTATTTTGCTCTTGTGCGTGGAGTTTTTGAGTACTTACTGTCGAAGT
GTCATCATAATTTCAACGTGCTGTCTCCACACCTTCTCCAGAAATTATTCTGTTTTGTGC
ATTCGTGCACGCATTGTGCGTTCACAATGGATATTATAGC