Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os06t0326400-01
CDS Infomation	cds chromosome:IRGSP-1.0:6:12794383:12800188:1 gene:Os06g0326400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:pyrophosphate-fructose-6-phosphatephosphotransferase alpha subunit 2, PFP-alpha subunit 2 description:Phosphofructokinase domain containing protein. (Os06t0326400-01)
Sequence	ATGGGCAGCGTGGCGATGGACTCCGACTACGGCGTGCCGCGCGAGCTGTCGGCGCTGCAG AAGGCCCGCGCGCTCTACCGCCCCGACCTCCCGCCCTGCCTCCAGGGCACCACGGTGAAG GTGGAGTACGGCGACGCGGCTATCGCGGCCGACGTGGCGGGCGCTCATGTCATCAGCCAC GCCTTCCCGCACACCTACGGCCAGCCGCTGGCGCATTTCCTCAGGAAGACTGCTGCTGTG CCGGATGCTACCGTCATAACAGAGCACCCTGTTGTCAGGGTTGGTGTTGTCTTCAGTGGG AGGCAGTCCCCAGGTGGGCACAATGTTATATGGGGACTCCATGATGCTATAAAGGCTCAC AACGCAAACAGCAAGCTCATTGGTTTCCTTGGAGGAACTGATGGATTGTTTGCACAGAAA ACTTTGGAGATCTCCGATGAGGTCCTTTCCTCTTATAAAAATCAAGGTGGTTATGATTTG CTTGGACGGACAAGGGATCAGATCAGAACAACTGAACAAGTGAATGCTGCAATGACTGCT TGCCAAGCCTTGAAGTTGGATGCTCTTGTAATAATTGGAGGTGTTACATCCAACACGGAT GCTGCTCAGCTTGCTGAGACTTTTGCTGAGTCAAAGTGTTCAACAAAGGTAGTTGGTGTT CCTGTAACTCTGAATGGGGACCTTAAGAACCAGTTTGTTGAGACAACTGTTGGTTTTGAT ACCATATGTAAGGTGAATTCGCAGCTCATAAGCAATGTCTGCACTGATGCTCTTTCTGCT GAGAAGTATTACTACTTTGTTCGGCTGATGGGACGGAAAGCATCTCATGTGGCTTTGGAA TGTGCTCTTCAATCGCATCCAAATATGGTTATACTAGGTGAGGAGGTTGCTGCATCAAAA CTTACAATTTTTGATATCACGAAGCAGATATGTGACGCAGTCCAGGCAAGGGCTGAAAAG GACAAAAATCATGGTGTTGTACTTATTCCTGAGGGACTTGTTGAAAGTATCCCTGAATTA TATGCTTTGCTTCAGGAAATTCATGGGCTACATGATAAAGGTGTTTCTGTTGAGAACATA TCTTCTCATCTTTCGCCTTGGGCTTCAGCTCTATTTGAATTTTTGCCTCCATTTATTAGG AAACAGCTACTTCTTCATCCTGAATCCGATGACTCCGCTCAACTTTCTCAGATTGAGACT GAGAAACTTCTAGCCCAATTAGTTGAAGCAGAAATGAACAAACGTCTGAAGGAAGGCACT TACAAAGGAAAGAAGTTCAATGCAATTTGTCACTTCTTTGGCTACCAAGCCAGAGGTGCC CTACCCTCAAAGTTCGACTGTGATTATGCTTATGTTCTTGGGCATGTATGCTATCACATC TTAGCTGCTGGCTTAAATGGCTACATGGCCACTGTGACAAATCTTAGGAGTCCTGTGAAC AAGTGGAAATGCGGTGCTGCTCCTATTACTTCCATGATGACCGTAAAGCGATGGTCACGA GGACCAGCTGCCAGTCAAATTGGGAAGCCTGCTGTTCACATGGCGAGTATCGACTTAAAA GGAAAACCATATGAGTTGTTGAGACAAAACTCTTCCAGCTTCTTGATGGAAGACATCTAC AGAAACCCTGGTCCTCTGCAATTTGAGGGACCAGGTGGAGAGACAAAGCCGATTTCATTG TGTGTCGAAGATCGAGACTACATGGGGAGGATCAAACAATTGCAGGAGTATTTGGAGAAG GTCAAAAGTATTGTGAAGCCTGGATGCTCCCAGGATGTCCTGAAGGCAGCGTTAAGCGCC ATGGCCTCTGTGACAGAGATGCTAACCATCATGTCTTCTCCCTCTTTCAGTGGCCAAGCA ACCATCTGA

Peptide Sequence

PEP ID	Os06t0326400-01
PEP Infomation	pep chromosome:IRGSP-1.0:6:12794383:12800188:1 gene:Os06g0326400 transcript:Os06t0326400-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:pyrophosphate-fructose-6-phosphatephosphotransferase alpha subunit 2, PFP-alpha subunit 2 description:Phosphofructokinase domain containing protein. (Os06t0326400-01)
Sequence	MGSVAMDSDYGVPRELSALQKARALYRPDLPPCLQGTTVKVEYGDAAIAADVAGAHVISH AFPHTYGQPLAHFLRKTAAVPDATVITEHPVVRVGVVFSGRQSPGGHNVIWGLHDAIKAH NANSKLIGFLGGTDGLFAQKTLEISDEVLSSYKNQGGYDLLGRTRDQIRTTEQVNAAMTA CQALKLDALVIIGGVTSNTDAAQLAETFAESKCSTKVVGVPVTLNGDLKNQFVETTVGFD TICKVNSQLISNVCTDALSAEKYYYFVRLMGRKASHVALECALQSHPNMVILGEEVAASK LTIFDITKQICDAVQARAEKDKNHGVVLIPEGLVESIPELYALLQEIHGLHDKGVSVENI SSHLSPWASALFEFLPPFIRKQLLLHPESDDSAQLSQIETEKLLAQLVEAEMNKRLKEGT YKGKKFNAICHFFGYQARGALPSKFDCDYAYVLGHVCYHILAAGLNGYMATVTNLRSPVN KWKCGAAPITSMMTVKRWSRGPAASQIGKPAVHMASIDLKGKPYELLRQNSSSFLMEDIY RNPGPLQFEGPGGETKPISLCVEDRDYMGRIKQLQEYLEKVKSIVKPGCSQDVLKAALSA MASVTEMLTIMSSPSFSGQATI

Transcript Sequence

Transcript ID	Os06t0326400-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:6:12794383:12800188:1 gene:Os06g0326400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:pyrophosphate-fructose-6-phosphatephosphotransferase alpha subunit 2, PFP-alpha subunit 2 description:Phosphofructokinase domain containing protein. (Os06t0326400-01)
Sequence	GTTATAGGCGATCGATCGAGCCACCTGTAGCCGAACGCCTCACTGGCCGGCGGCGAGGGA GAGACGAGAAAAGGCGGCGGCGCCGGCGGGTGATGGGCAGCGTGGCGATGGACTCCGACT ACGGCGTGCCGCGCGAGCTGTCGGCGCTGCAGAAGGCCCGCGCGCTCTACCGCCCCGACC TCCCGCCCTGCCTCCAGGGCACCACGGTGAAGGTGGAGTACGGCGACGCGGCTATCGCGG CCGACGTGGCGGGCGCTCATGTCATCAGCCACGCCTTCCCGCACACCTACGGCCAGCCGC TGGCGCATTTCCTCAGGAAGACTGCTGCTGTGCCGGATGCTACCGTCATAACAGAGCACC CTGTTGTCAGGGTTGGTGTTGTCTTCAGTGGGAGGCAGTCCCCAGGTGGGCACAATGTTA TATGGGGACTCCATGATGCTATAAAGGCTCACAACGCAAACAGCAAGCTCATTGGTTTCC TTGGAGGAACTGATGGATTGTTTGCACAGAAAACTTTGGAGATCTCCGATGAGGTCCTTT CCTCTTATAAAAATCAAGGTGGTTATGATTTGCTTGGACGGACAAGGGATCAGATCAGAA CAACTGAACAAGTGAATGCTGCAATGACTGCTTGCCAAGCCTTGAAGTTGGATGCTCTTG TAATAATTGGAGGTGTTACATCCAACACGGATGCTGCTCAGCTTGCTGAGACTTTTGCTG AGTCAAAGTGTTCAACAAAGGTAGTTGGTGTTCCTGTAACTCTGAATGGGGACCTTAAGA ACCAGTTTGTTGAGACAACTGTTGGTTTTGATACCATATGTAAGGTGAATTCGCAGCTCA TAAGCAATGTCTGCACTGATGCTCTTTCTGCTGAGAAGTATTACTACTTTGTTCGGCTGA TGGGACGGAAAGCATCTCATGTGGCTTTGGAATGTGCTCTTCAATCGCATCCAAATATGG TTATACTAGGTGAGGAGGTTGCTGCATCAAAACTTACAATTTTTGATATCACGAAGCAGA TATGTGACGCAGTCCAGGCAAGGGCTGAAAAGGACAAAAATCATGGTGTTGTACTTATTC CTGAGGGACTTGTTGAAAGTATCCCTGAATTATATGCTTTGCTTCAGGAAATTCATGGGC TACATGATAAAGGTGTTTCTGTTGAGAACATATCTTCTCATCTTTCGCCTTGGGCTTCAG CTCTATTTGAATTTTTGCCTCCATTTATTAGGAAACAGCTACTTCTTCATCCTGAATCCG ATGACTCCGCTCAACTTTCTCAGATTGAGACTGAGAAACTTCTAGCCCAATTAGTTGAAG CAGAAATGAACAAACGTCTGAAGGAAGGCACTTACAAAGGAAAGAAGTTCAATGCAATTT GTCACTTCTTTGGCTACCAAGCCAGAGGTGCCCTACCCTCAAAGTTCGACTGTGATTATG CTTATGTTCTTGGGCATGTATGCTATCACATCTTAGCTGCTGGCTTAAATGGCTACATGG CCACTGTGACAAATCTTAGGAGTCCTGTGAACAAGTGGAAATGCGGTGCTGCTCCTATTA CTTCCATGATGACCGTAAAGCGATGGTCACGAGGACCAGCTGCCAGTCAAATTGGGAAGC CTGCTGTTCACATGGCGAGTATCGACTTAAAAGGAAAACCATATGAGTTGTTGAGACAAA ACTCTTCCAGCTTCTTGATGGAAGACATCTACAGAAACCCTGGTCCTCTGCAATTTGAGG GACCAGGTGGAGAGACAAAGCCGATTTCATTGTGTGTCGAAGATCGAGACTACATGGGGA GGATCAAACAATTGCAGGAGTATTTGGAGAAGGTCAAAAGTATTGTGAAGCCTGGATGCT CCCAGGATGTCCTGAAGGCAGCGTTAAGCGCCATGGCCTCTGTGACAGAGATGCTAACCA TCATGTCTTCTCCCTCTTTCAGTGGCCAAGCAACCATCTGAGAGCCAGTGAAGCTGAAGC CTGTCATATCCTGGTATCCGTATCTCTCTGTTTTGAGTGTCTCGTTTTTGGACCTGTGAA TTTGAGTGTGATAGAGATGTGTTGAGGATGAGTTCTGGAACAGCAATAATTGCTCAAACA GGTCACTGCATTGCGAGTGGTTTGTGTTCGATTATATTAGATTTGAGCTTACCGTTTTCT TTGGCGGCACTATTATGAAACGTGAGCTAGCACCTCTGATTCCTCTGGGAATCGTAGCTA TCTTGCCTGCACAGGATGTGAGCTCAGAGAATTTCGCCGTGATTCATAACTATCTTTTCT GCAGAAGGATGTTTTTTCACTTTAC