Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os06t0320700-01
CDS Infomation	cds chromosome:IRGSP-1.0:6:12456786:12462588:-1 gene:Os06g0320700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Uncharacterised protein family UPF0061 domain containing protein. (Os06t0320700-01)
Sequence	ATGCCCCCACACCTCTCCTCCTCCCTCTTCTCCTCCTCCCCTCTCCCCACCGCCCTCCTC TCCTCCCTCACCCGCCGCGCCCGCGCCCTCCTCCCCCTCCCCCTCCCCCTCCCCGCCGCC TCCACCCGCCGCCGCCTCCCTCTCCGCCGCGGCCCGCTGCTGACGCGTGGCATCATGGCC TCCGCCGCCGCAGAGGCACCGGCCCCGTCGCCCTCGCCCACCGCCGCCGCGAACAGCCGA CCGCGGCGGGTGCTGGAGGAGCTCTCCTGGGACGACTCCTTCGTCCGCGAGCTCCCCGGC GACCCCCGATCCGACGCCATCCCCCGCGAGGTGCTTCACGCTTGTTACACAAAGGTGTCA CCCTCAGCGCCCGTGGACAACCCTAAGCTGGTGGCGTGGTCCCAGTCCGTGGCTGACATC CTCGATCTGGATCACAAAGAGTTTGAAAGACCTGATTTTCCTCAGCTGTTCTCAGGAGCA AATCCTTTGGTTGGGAGTTCACCTTATGCCCAGTGCTATGGTGGACACCAGTTTGGTTCA TGGGCTGGTCAGTTGGGCGACGGACGAGCAATAACTCTTGGAGAGGTTATCAACTCTCGA GGTGAGAGATGGGAGTTGCAGCTCAAGGGCTGTGGAAAGACTCCATACAGCCGATTTGCA GATGGCCTTGCTGTCCTCCGCAGCAGCATTCGTGAATTCCTATGCAGTGAAGCTATGCAT GGCCTAGGCATCCCTACAACTCGTGCTCTTTGTCTAGTTGAAACTGGCAAATCTGTTGTT CGAGATATGTTCTATGATGGCAATTCAAAGGAGGAACCAGGTGCCATTGTATGCCGTGTA GCACCATCCTTTTTGCGTTTTGGTTCATATCAGATACATGCTACAAGGGACAAAGAGGAC CTTGAAATTGTTCGTCATTTGGCAGACTACACAATACGTCATCACTACCCACATCTCGAA AATATTAAAAAGAGTGAAGGTTTATCTTTTGAAGCAGCTATAGGGGACTCTCCAGCGATA GATCTTACTTCGAACAAATATGCAGCCTGGGCAGTTGAGGTTGCAGAGCGCACTGCTTTC TTGATAGCAAGGTGGCAAGGTGTTGGTTTTACCCATGGTGTGCTCAACACGGATAATATG AGTGTATTAGGACTAACTATTGACTATGGACCCTTTGGCTTTTTGGATGCTTTTGATCCT AGCTATACTCCAAATACAACAGACCTCCCTGGGAAGAGATACTGTTTTGCAAATCAACCT GATGTTGGCTTGTGGAATATTGCTCAGTTTACCTCACCATTGACAGCTGCCGAACTTATC AGCAAAGATGAGGCAAATTATGTGATGGAGAGGTACGGGACAAAGTTTATGGATGAGTAT CAATCCATAATGACCAGGAAACTTGGTCTACCCAAGTATAATAAGCAGCTAATAGGCAAG CTGCTTAACAACCTGGCTGTTGATAAGGTCGATTATACAAATTTTTTCCGTCTTCTTTCA AATGTCAAAGCAGACCATAACATTCCAGAGAAGGAGCTACTTGTTCCACTTAAAGCTGCA CTCCTAGATATTGGACCAGAAAGAAAGGAAGCATGGATTAGTTGGGTACAAACTTACATT GAAGAGTTGGTTTCAAGTGGCGTTCCTGACGAAGAAAGGAAAGCTGCCATGAACTCTGTT AATCCAAAGTATGTTCTTCGGAACTATCTCTGCCAGACTGCAATTGACGCAGCTGAGCAA GGTGATTATGATGAAGTTCGTCGGTTATTGAAAGTTATGGAACATCCATATGATGAGCAG CCAGGAATGGAGAAATATGCCCGGTTGCCACCAGCCTGGGCATACAGGCCAGGAGTGTGC ATGCTGTCCTGCTCATCATGA

Peptide Sequence

PEP ID	Os06t0320700-01
PEP Infomation	pep chromosome:IRGSP-1.0:6:12456786:12462588:-1 gene:Os06g0320700 transcript:Os06t0320700-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Uncharacterised protein family UPF0061 domain containing protein. (Os06t0320700-01)
Sequence	MPPHLSSSLFSSSPLPTALLSSLTRRARALLPLPLPLPAASTRRRLPLRRGPLLTRGIMA SAAAEAPAPSPSPTAAANSRPRRVLEELSWDDSFVRELPGDPRSDAIPREVLHACYTKVS PSAPVDNPKLVAWSQSVADILDLDHKEFERPDFPQLFSGANPLVGSSPYAQCYGGHQFGS WAGQLGDGRAITLGEVINSRGERWELQLKGCGKTPYSRFADGLAVLRSSIREFLCSEAMH GLGIPTTRALCLVETGKSVVRDMFYDGNSKEEPGAIVCRVAPSFLRFGSYQIHATRDKED LEIVRHLADYTIRHHYPHLENIKKSEGLSFEAAIGDSPAIDLTSNKYAAWAVEVAERTAF LIARWQGVGFTHGVLNTDNMSVLGLTIDYGPFGFLDAFDPSYTPNTTDLPGKRYCFANQP DVGLWNIAQFTSPLTAAELISKDEANYVMERYGTKFMDEYQSIMTRKLGLPKYNKQLIGK LLNNLAVDKVDYTNFFRLLSNVKADHNIPEKELLVPLKAALLDIGPERKEAWISWVQTYI EELVSSGVPDEERKAAMNSVNPKYVLRNYLCQTAIDAAEQGDYDEVRRLLKVMEHPYDEQ PGMEKYARLPPAWAYRPGVCMLSCSS

Transcript Sequence

Transcript ID	Os06t0320700-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:6:12456786:12462588:-1 gene:Os06g0320700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Uncharacterised protein family UPF0061 domain containing protein. (Os06t0320700-01)
Sequence	GCCATGCCCCCACACCTCTCCTCCTCCCTCTTCTCCTCCTCCCCTCTCCCCACCGCCCTC CTCTCCTCCCTCACCCGCCGCGCCCGCGCCCTCCTCCCCCTCCCCCTCCCCCTCCCCGCC GCCTCCACCCGCCGCCGCCTCCCTCTCCGCCGCGGCCCGCTGCTGACGCGTGGCATCATG GCCTCCGCCGCCGCAGAGGCACCGGCCCCGTCGCCCTCGCCCACCGCCGCCGCGAACAGC CGACCGCGGCGGGTGCTGGAGGAGCTCTCCTGGGACGACTCCTTCGTCCGCGAGCTCCCC GGCGACCCCCGATCCGACGCCATCCCCCGCGAGGTGCTTCACGCTTGTTACACAAAGGTG TCACCCTCAGCGCCCGTGGACAACCCTAAGCTGGTGGCGTGGTCCCAGTCCGTGGCTGAC ATCCTCGATCTGGATCACAAAGAGTTTGAAAGACCTGATTTTCCTCAGCTGTTCTCAGGA GCAAATCCTTTGGTTGGGAGTTCACCTTATGCCCAGTGCTATGGTGGACACCAGTTTGGT TCATGGGCTGGTCAGTTGGGCGACGGACGAGCAATAACTCTTGGAGAGGTTATCAACTCT CGAGGTGAGAGATGGGAGTTGCAGCTCAAGGGCTGTGGAAAGACTCCATACAGCCGATTT GCAGATGGCCTTGCTGTCCTCCGCAGCAGCATTCGTGAATTCCTATGCAGTGAAGCTATG CATGGCCTAGGCATCCCTACAACTCGTGCTCTTTGTCTAGTTGAAACTGGCAAATCTGTT GTTCGAGATATGTTCTATGATGGCAATTCAAAGGAGGAACCAGGTGCCATTGTATGCCGT GTAGCACCATCCTTTTTGCGTTTTGGTTCATATCAGATACATGCTACAAGGGACAAAGAG GACCTTGAAATTGTTCGTCATTTGGCAGACTACACAATACGTCATCACTACCCACATCTC GAAAATATTAAAAAGAGTGAAGGTTTATCTTTTGAAGCAGCTATAGGGGACTCTCCAGCG ATAGATCTTACTTCGAACAAATATGCAGCCTGGGCAGTTGAGGTTGCAGAGCGCACTGCT TTCTTGATAGCAAGGTGGCAAGGTGTTGGTTTTACCCATGGTGTGCTCAACACGGATAAT ATGAGTGTATTAGGACTAACTATTGACTATGGACCCTTTGGCTTTTTGGATGCTTTTGAT CCTAGCTATACTCCAAATACAACAGACCTCCCTGGGAAGAGATACTGTTTTGCAAATCAA CCTGATGTTGGCTTGTGGAATATTGCTCAGTTTACCTCACCATTGACAGCTGCCGAACTT ATCAGCAAAGATGAGGCAAATTATGTGATGGAGAGGTACGGGACAAAGTTTATGGATGAG TATCAATCCATAATGACCAGGAAACTTGGTCTACCCAAGTATAATAAGCAGCTAATAGGC AAGCTGCTTAACAACCTGGCTGTTGATAAGGTCGATTATACAAATTTTTTCCGTCTTCTT TCAAATGTCAAAGCAGACCATAACATTCCAGAGAAGGAGCTACTTGTTCCACTTAAAGCT GCACTCCTAGATATTGGACCAGAAAGAAAGGAAGCATGGATTAGTTGGGTACAAACTTAC ATTGAAGAGTTGGTTTCAAGTGGCGTTCCTGACGAAGAAAGGAAAGCTGCCATGAACTCT GTTAATCCAAAGTATGTTCTTCGGAACTATCTCTGCCAGACTGCAATTGACGCAGCTGAG CAAGGTGATTATGATGAAGTTCGTCGGTTATTGAAAGTTATGGAACATCCATATGATGAG CAGCCAGGAATGGAGAAATATGCCCGGTTGCCACCAGCCTGGGCATACAGGCCAGGAGTG TGCATGCTGTCCTGCTCATCATGAAACCAACATTCCATCACGTCAAATATGCAAACTTGT TTTTTTTATATTATTTTTTTCTGTATAGGAGGTTTAATTTTGAGCTACTGCTATAGTGTC TAAAGCATCACATGCTATTTTACTGCCGATGCATATCAGAAACTGGTGTTGTTAATCTTC GAGTTATCATATTGTTGACGGTAGCTAAGCGTTCATAGCAGTTGGGAAATAGAGCCACCA AACTCATCCGATTTTCTTAGATATAGTGCTTTGTTGTTGTGAACAGATTATATTTTCGCA GATGAACATGATGTGCATTTAGTTTTAGCTGTCCATCTAATTATGTCCAGCAACATGAGA GGTGTTTATTTACTTC