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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os06t0319700-01
CDS Infomation

cds chromosome:IRGSP-1.0:6:12412530:12415341:1 gene:Os06g0319700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to 60S ribosomal protein L31. (Os06t0319700-01)
Sequence

ATGGCGGAGAAGAAGCAGCGCCCCGGCGGCGCGAGGAAGGACGAGGTGGTCACCCGCGAG
TACACCATCAACCTCCACAAGCGCCTCCACGGATGCACCTTCAAGAAGAAGGCTCCTAAT
GCCATCAAGGAGATCAGGAAGTTTGCACAGAAGGCCATGGGCACCATTGACGTCAGGGTT
GATGTGAAGCTCAACAAGCACATCTGGAGCAGCGGTATCCGGAGCGTTCCAAGGCGTGTC
CGTGTCAGAATTGCCCGCAGGAGGAACGACGAGGAGGATGCGAAGGAGGAGCTCTACTCT
CTGGTCACTGTTGCTGAGGTTCCCCAAGAGGGGTTGAAGGGCCTGGGTACCAAGCTTGTC
GAGGACGATGAGTAA

Peptide Sequence

PEP ID

Os06t0319700-01
PEP Infomation

pep chromosome:IRGSP-1.0:6:12412530:12415341:1 gene:Os06g0319700 transcript:Os06t0319700-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to 60S ribosomal protein L31. (Os06t0319700-01)
Sequence

MAEKKQRPGGARKDEVVTREYTINLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGTIDVRV
DVKLNKHIWSSGIRSVPRRVRVRIARRRNDEEDAKEELYSLVTVAEVPQEGLKGLGTKLV
EDDE

Transcript Sequence

Transcript ID

Os06t0319700-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:6:12412530:12415341:1 gene:Os06g0319700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to 60S ribosomal protein L31. (Os06t0319700-01)
Sequence

GTCGTAGGCTAGGGTTTCTCACGTCTCTCGCTGCCGCCGCCGCCGCCGCCGCCGCCGCGA
GAAGCCGTAGGAGGAGGAGAGAGAGGGAGGGATGGCGGAGAAGAAGCAGCGCCCCGGCGG
CGCGAGGAAGGACGAGGTGGTCACCCGCGAGTACACCATCAACCTCCACAAGCGCCTCCA
CGGATGCACCTTCAAGAAGAAGGCTCCTAATGCCATCAAGGAGATCAGGAAGTTTGCACA
GAAGGCCATGGGCACCATTGACGTCAGGGTTGATGTGAAGCTCAACAAGCACATCTGGAG
CAGCGGTATCCGGAGCGTTCCAAGGCGTGTCCGTGTCAGAATTGCCCGCAGGAGGAACGA
CGAGGAGGATGCGAAGGAGGAGCTCTACTCTCTGGTCACTGTTGCTGAGGTTCCCCAAGA
GGGGTTGAAGGGCCTGGGTACCAAGCTTGTCGAGGACGATGAGTAAATATGCCTAGGTTT
TGATCTTACCTGCATCAAAGCAATTTTGTGTTCACGAGTTGTTTGAACTAGAATGATCTT
GATTAGTAAACTAGCAGAGGTTTTTGGTACTGAACTATGAGTTATTCAGTGCAGTTGTTT
CTGGTTGCCATATTGTTGAGGTCAGGTGCTTAGTTTGATCAGTGATGTTGCTGCTCTTTA
GTCAGGTATGATTTCATTGCGGCAACCAAAACCTCCGCAAAAACATCAGAACTCGAACGA
ATGTGGCTGTGTCTGATTTCATTGTCCATGACCACTATCTCTATAGTTGTCGCAATCATC
AGGAGGCCTACTACTAGAATTTTAAGTGTTC