Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os06t0318500-00
CDS Infomation

cds chromosome:IRGSP-1.0:6:12333229:12337317:1 gene:Os06g0318500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:NA+/H+ ANTIPORTER 4 description:Similar to Sodium/hydrogen exchanger. (Os06t0318500-00)
Sequence

ATGGCGTGGTGGTGGTGGTGGTCGGAGGCGGTGGTGGTGGGCGGAGGGACGGGCGGCGGG
AGCAGCGGCACGGTGGTGTCCATCTGCGTGTTCACGGCGGTGCTGTGCGTGTGCCTCGTC
GCCGGCCACCTCCTCGAGGAGAACAAGTGGGTCAACGAGTCCATCACCGCCCTCCTCATC
GGTTGTGTTGTAGGTGCTATCATATTTCTGTTGAGTGAAGGCAAGAACTCGCGAATCCTG
AGGTTCGACGAGCAGCTCTTCTTCATCTATGTACTTCCTCCCATAATCTTCAATGCAGGC
TTCCAGGTCAAGAAGAAGCAGTTCTTTCACAATTTTCTCACCATAATGTCCTTTGGGATA
TTCGGCGTGTTCATCTCAGTTGCGATAGTTTCAACAGGTTGCTACTGGCTCTTCCCAAAA
GTTGGTTTTGGGGACCTTGGCGCGGTAGATTATCTAGCTTTGGGAGCAATATTTTCCTCA
ACAGATACTGTCTGCACATTGCAGGTCATCAGCCAGGATGAGACACCTAGATTGTACAGT
TTGGTGTTTGGGGAAGGAGTGGTCAATGATGCAACCTCAGTTGTGCTTTTCAACGCTATA
AAGAATCTGGATATCACTCAGCTCAAAGGCGGGGTTGCGCTAAAAGTCATTTCAGATTTT
CTCTACCTGTTCTTCACTAGCACTATGCTTGGAGTTACAATTGGGCTATCAACTGCTTAT
GCTCTCAAAGCTCTGTATTTTGGTAGGCACTCCACTGATAGGGAAGTAGCTTTGATGGCT
CTCATGGCTTATTTGTCATATATGCTGGCAGAGTTTCTTGATCTGAGTGGGATTTTGATG
GTGTTCTTTTGTGGAATTGTTATGTCCCATTACGCATGGCATAATGTGACGGAAAGCTCA
AGAATCACAACCAGGCACATATTTGCAACGCTGTCATTTATCGCCGAGACATTCATCTTT
CTTTATGTTGGAATGGATGCACTTGACATTGATAAGTGGAAAACATCAGAGACAAGCTTT
AAAACATCACTCGGTATCTTTGGAATCATCATATCGCTCGTTTTATTGGGAAGAGCTGCA
TTCGTTTTCCCTCTATCCATTATGTCAAATTACATGAGTGGGAGTTCTGAAAAAGCGCCA
ATCACATTCAATCACCAGGTAGTGATTTGGTGGGCGGGCCTCATGAGAGGAGCTGTTTCG
ATCGCACTAGCATATAATCAGTTCACCTTTTCAGGTGTAACTTTGGATCCAGTTCATGCA
ACCATCATCACCAGTACAATCATTGTAGTATTTTTCACCACTCTGGTGTTTGGCTTCTTG
ACAAGGCCACTCATAAGTGCCATACTCCCGCATCAACACCGGCAATCAACGACACCGGGG
ACCGGAGGAGGAGGCCGTAGCACGGGCAGCAACTCCCCGAAGGACGACTTCATCATGCCG
TTCCTCTCGCCTGATGAAGAGGCGTCAGGGAGCGGCAGTGGGTTCCTCCAGGCCAAGAGG
AGCATCTCCATGCTCCTGGAGAGGCCAGTCCACACGGTGCACATCTACTGGAGGAAGTTC
GACGACAGGTTCATGAGGCCCATCTTCGGTGGACCGATGGAGCGCGATCGCGGTAACTGT
TACTGA

Peptide Sequence

PEP ID

Os06t0318500-00
PEP Infomation

pep chromosome:IRGSP-1.0:6:12333229:12337317:1 gene:Os06g0318500 transcript:Os06t0318500-00 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:NA+/H+ ANTIPORTER 4 description:Similar to Sodium/hydrogen exchanger. (Os06t0318500-00)
Sequence

MAWWWWWSEAVVVGGGTGGGSSGTVVSICVFTAVLCVCLVAGHLLEENKWVNESITALLI
GCVVGAIIFLLSEGKNSRILRFDEQLFFIYVLPPIIFNAGFQVKKKQFFHNFLTIMSFGI
FGVFISVAIVSTGCYWLFPKVGFGDLGAVDYLALGAIFSSTDTVCTLQVISQDETPRLYS
LVFGEGVVNDATSVVLFNAIKNLDITQLKGGVALKVISDFLYLFFTSTMLGVTIGLSTAY
ALKALYFGRHSTDREVALMALMAYLSYMLAEFLDLSGILMVFFCGIVMSHYAWHNVTESS
RITTRHIFATLSFIAETFIFLYVGMDALDIDKWKTSETSFKTSLGIFGIIISLVLLGRAA
FVFPLSIMSNYMSGSSEKAPITFNHQVVIWWAGLMRGAVSIALAYNQFTFSGVTLDPVHA
TIITSTIIVVFFTTLVFGFLTRPLISAILPHQHRQSTTPGTGGGGRSTGSNSPKDDFIMP
FLSPDEEASGSGSGFLQAKRSISMLLERPVHTVHIYWRKFDDRFMRPIFGGPMERDRGNC
Y

Transcript Sequence

Transcript ID

Os06t0318500-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:6:12333229:12337317:1 gene:Os06g0318500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:NA+/H+ ANTIPORTER 4 description:Similar to Sodium/hydrogen exchanger. (Os06t0318500-00)
Sequence

CGCAGCAGAGAGAACAGAGAGGGGAATGCGAGGATGGCGTGGTGGTGGTGGTGGTCGGAG
GCGGTGGTGGTGGGCGGAGGGACGGGCGGCGGGAGCAGCGGCACGGTGGTGTCCATCTGC
GTGTTCACGGCGGTGCTGTGCGTGTGCCTCGTCGCCGGCCACCTCCTCGAGGAGAACAAG
TGGGTCAACGAGTCCATCACCGCCCTCCTCATCGGTTGTGTTGTAGGTGCTATCATATTT
CTGTTGAGTGAAGGCAAGAACTCGCGAATCCTGAGGTTCGACGAGCAGCTCTTCTTCATC
TATGTACTTCCTCCCATAATCTTCAATGCAGGCTTCCAGGTCAAGAAGAAGCAGTTCTTT
CACAATTTTCTCACCATAATGTCCTTTGGGATATTCGGCGTGTTCATCTCAGTTGCGATA
GTTTCAACAGGTTGCTACTGGCTCTTCCCAAAAGTTGGTTTTGGGGACCTTGGCGCGGTA
GATTATCTAGCTTTGGGAGCAATATTTTCCTCAACAGATACTGTCTGCACATTGCAGGTC
ATCAGCCAGGATGAGACACCTAGATTGTACAGTTTGGTGTTTGGGGAAGGAGTGGTCAAT
GATGCAACCTCAGTTGTGCTTTTCAACGCTATAAAGAATCTGGATATCACTCAGCTCAAA
GGCGGGGTTGCGCTAAAAGTCATTTCAGATTTTCTCTACCTGTTCTTCACTAGCACTATG
CTTGGAGTTACAATTGGGCTATCAACTGCTTATGCTCTCAAAGCTCTGTATTTTGGTAGG
CACTCCACTGATAGGGAAGTAGCTTTGATGGCTCTCATGGCTTATTTGTCATATATGCTG
GCAGAGTTTCTTGATCTGAGTGGGATTTTGATGGTGTTCTTTTGTGGAATTGTTATGTCC
CATTACGCATGGCATAATGTGACGGAAAGCTCAAGAATCACAACCAGGCACATATTTGCA
ACGCTGTCATTTATCGCCGAGACATTCATCTTTCTTTATGTTGGAATGGATGCACTTGAC
ATTGATAAGTGGAAAACATCAGAGACAAGCTTTAAAACATCACTCGGTATCTTTGGAATC
ATCATATCGCTCGTTTTATTGGGAAGAGCTGCATTCGTTTTCCCTCTATCCATTATGTCA
AATTACATGAGTGGGAGTTCTGAAAAAGCGCCAATCACATTCAATCACCAGGTAGTGATT
TGGTGGGCGGGCCTCATGAGAGGAGCTGTTTCGATCGCACTAGCATATAATCAGTTCACC
TTTTCAGGTGTAACTTTGGATCCAGTTCATGCAACCATCATCACCAGTACAATCATTGTA
GTATTTTTCACCACTCTGGTGTTTGGCTTCTTGACAAGGCCACTCATAAGTGCCATACTC
CCGCATCAACACCGGCAATCAACGACACCGGGGACCGGAGGAGGAGGCCGTAGCACGGGC
AGCAACTCCCCGAAGGACGACTTCATCATGCCGTTCCTCTCGCCTGATGAAGAGGCGTCA
GGGAGCGGCAGTGGGTTCCTCCAGGCCAAGAGGAGCATCTCCATGCTCCTGGAGAGGCCA
GTCCACACGGTGCACATCTACTGGAGGAAGTTCGACGACAGGTTCATGAGGCCCATCTTC
GGTGGACCGATGGAGCGCGATCGCGGTAACTGTTACTGATCGAGCAGAAATAGTTGGCAC
ATTGCCACTGGAG