Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os06t0318200-01
CDS Infomation

cds chromosome:IRGSP-1.0:6:12318391:12320838:1 gene:Os06g0318200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Ankyrin domain containing protein. (Os06t0318200-01)
Sequence

ATGGACCGCCCGCGGCAGCAGCACGAGCCGGAGCATCTCGGCGGCGGCGGCATCGACGTC
GAGGTCGAGCTCGACCCGGAGGACCTCCAGCCGTCGGTGCCCCTCAAGAAGGTCCCCGCG
GGGGACCTCTTCGAGGCGGCCCGCGCGGGGGACTGCGCCCGCCTCGCCCTCCTCCTCGGC
GGCGGCGCCAACGTCAACGAGCGCGACCGCTGGGACTCCGTCGCGCTCTACTACGCCTGC
CTCGCCGGCCACGCCGACGCCGCCCGGATGCTGCTCGAGGCCGGGGCCGTCTGCGCCGAG
CGCACCTTCGACGGCGACCGCTGCCACTACGCCGCGCTCAACCTCCGCCTCCGGAGGCTG
CTCAAGGCGTTCGAGGCCAGGCCCCCGCCGCTGCCGCCGCTCCCCGCCGCGCTCAGGGCC
ACGTTCCTCGCCTGCCCCGCCAACCGCGCCGCCTTCCTCGAGATGCTCCAGTGGACCGCC
GGCTCCGAAGCCGCCGCCCTCGCCGCTGCTGCTGGATTTGGGCCAACGGACAATCCATCA
AGTACTAGCCTATTCCCTCCGGACATTACATTCTACGTGGATGGAAAACCAATTGAAGCT
CATCGGGTCATTCTTTGTGCCCGGTCATCCTTCTTTCGGAGGAAATTCAATACAGACTGG
AAAGACAGGAAGGAAGTGAGATTTTCTAGCCAGAAGTTATCTTTTGGTGCCTTGTACAGC
CTTGTCCATTTCTTCTATTCTGATAGACTCGAAGTGGATGTGGATGATATGGAAAATTTG
GCGCGGGCGTGCAAAGTTTGTAAGTGTGAGGGTTTGCAAAAGATATTGATTAAAGAAGCT
ACTCTCCAGAGATATGCAGAACACAAGTCACCGAGAGATTTGGACAGTTCACAGAAGAGG
TTCATTTTACATGGGCAATCCTTGCCAGAGGAGGATCGCCTTCCATCAGCCCTGCGGCAT
ATTTTTGAGGAATGTCTAGCTAACTCAAGAGAACAAGAATGTTATAACGATGAATCAAAT
GAAATGAGCAGAGACTCTGGTGTAGATGCTGCTGCTGATCTTTATATAAAAGTATGTGAT
AAGGTTTTCCATTGCCATCAGGTGATTTTAGCCTCAAGATCAGAGTACTTTAAAGCTAGG
CTATCTAGAAACATGGATTTTCTTGAAGTCAAGAGTGGGCTTCAATCAACTCAGAGCCTT
CCTTTTCTTGAAGAGCATGACATGAGTACAGAAGCATTTGAAAAGGTGCTTGAATACATG
TATACTGATAACCTAGAGCATATGGATCCTAATCAGGCTGAAGAACTATTTGATATTGCT
TCGAGATACCTGCTATTCCCCCTTAAACGAGTTGTGGCAGATATACTTTTGCCTTATCTG
GAGCATGTTTCACCTGCAGAACTATGCCACTGGCTAATGTTATCAGACATTTATGATGTT
GTGAAAATAAGGGAGTATTGCTTGGATATCATCGCTTGCAATTTTGAGATGTTTGCGGAC
ACAAGAGAGTTCAGGGCATTGCTTTTGACACTTCCACCACCATCTGGAGATGACTCACTG
CGAACAACTCGTCCCAGTGAACCTGGTACTGCAGGCAACACTGACCAAGGCAACCTTCTT
GATGATTTGCGTGAGAAATGGTTAGAAGCAGAGGCTGCTGAGCTAGACGAGAGAGATGAG
AGTGCAAAGCTGTTTGACAACCGATTGGAAATGCTTATGCTTGTAGCAGAACAAGAAGCC
AATGATGGCAATGTTTGA

Peptide Sequence

PEP ID

Os06t0318200-01
PEP Infomation

pep chromosome:IRGSP-1.0:6:12318391:12320838:1 gene:Os06g0318200 transcript:Os06t0318200-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Ankyrin domain containing protein. (Os06t0318200-01)
Sequence

MDRPRQQHEPEHLGGGGIDVEVELDPEDLQPSVPLKKVPAGDLFEAARAGDCARLALLLG
GGANVNERDRWDSVALYYACLAGHADAARMLLEAGAVCAERTFDGDRCHYAALNLRLRRL
LKAFEARPPPLPPLPAALRATFLACPANRAAFLEMLQWTAGSEAAALAAAAGFGPTDNPS
STSLFPPDITFYVDGKPIEAHRVILCARSSFFRRKFNTDWKDRKEVRFSSQKLSFGALYS
LVHFFYSDRLEVDVDDMENLARACKVCKCEGLQKILIKEATLQRYAEHKSPRDLDSSQKR
FILHGQSLPEEDRLPSALRHIFEECLANSREQECYNDESNEMSRDSGVDAAADLYIKVCD
KVFHCHQVILASRSEYFKARLSRNMDFLEVKSGLQSTQSLPFLEEHDMSTEAFEKVLEYM
YTDNLEHMDPNQAEELFDIASRYLLFPLKRVVADILLPYLEHVSPAELCHWLMLSDIYDV
VKIREYCLDIIACNFEMFADTREFRALLLTLPPPSGDDSLRTTRPSEPGTAGNTDQGNLL
DDLREKWLEAEAAELDERDESAKLFDNRLEMLMLVAEQEANDGNV

Transcript Sequence

Transcript ID

Os06t0318200-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:6:12318391:12320838:1 gene:Os06g0318200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Ankyrin domain containing protein. (Os06t0318200-01)
Sequence

ATTTTCCGCGAACCCATTCCCATTCCCATTCCCACTCTCCCTCCCTCCGCCGCCAAATTC
GCCGGAGAAACAAAAAAAAAATGGACCGCCCGCGGCAGCAGCACGAGCCGGAGCATCTCG
GCGGCGGCGGCATCGACGTCGAGGTCGAGCTCGACCCGGAGGACCTCCAGCCGTCGGTGC
CCCTCAAGAAGGTCCCCGCGGGGGACCTCTTCGAGGCGGCCCGCGCGGGGGACTGCGCCC
GCCTCGCCCTCCTCCTCGGCGGCGGCGCCAACGTCAACGAGCGCGACCGCTGGGACTCCG
TCGCGCTCTACTACGCCTGCCTCGCCGGCCACGCCGACGCCGCCCGGATGCTGCTCGAGG
CCGGGGCCGTCTGCGCCGAGCGCACCTTCGACGGCGACCGCTGCCACTACGCCGCGCTCA
ACCTCCGCCTCCGGAGGCTGCTCAAGGCGTTCGAGGCCAGGCCCCCGCCGCTGCCGCCGC
TCCCCGCCGCGCTCAGGGCCACGTTCCTCGCCTGCCCCGCCAACCGCGCCGCCTTCCTCG
AGATGCTCCAGTGGACCGCCGGCTCCGAAGCCGCCGCCCTCGCCGCTGCTGCTGGATTTG
GGCCAACGGACAATCCATCAAGTACTAGCCTATTCCCTCCGGACATTACATTCTACGTGG
ATGGAAAACCAATTGAAGCTCATCGGGTCATTCTTTGTGCCCGGTCATCCTTCTTTCGGA
GGAAATTCAATACAGACTGGAAAGACAGGAAGGAAGTGAGATTTTCTAGCCAGAAGTTAT
CTTTTGGTGCCTTGTACAGCCTTGTCCATTTCTTCTATTCTGATAGACTCGAAGTGGATG
TGGATGATATGGAAAATTTGGCGCGGGCGTGCAAAGTTTGTAAGTGTGAGGGTTTGCAAA
AGATATTGATTAAAGAAGCTACTCTCCAGAGATATGCAGAACACAAGTCACCGAGAGATT
TGGACAGTTCACAGAAGAGGTTCATTTTACATGGGCAATCCTTGCCAGAGGAGGATCGCC
TTCCATCAGCCCTGCGGCATATTTTTGAGGAATGTCTAGCTAACTCAAGAGAACAAGAAT
GTTATAACGATGAATCAAATGAAATGAGCAGAGACTCTGGTGTAGATGCTGCTGCTGATC
TTTATATAAAAGTATGTGATAAGGTTTTCCATTGCCATCAGGTGATTTTAGCCTCAAGAT
CAGAGTACTTTAAAGCTAGGCTATCTAGAAACATGGATTTTCTTGAAGTCAAGAGTGGGC
TTCAATCAACTCAGAGCCTTCCTTTTCTTGAAGAGCATGACATGAGTACAGAAGCATTTG
AAAAGGTGCTTGAATACATGTATACTGATAACCTAGAGCATATGGATCCTAATCAGGCTG
AAGAACTATTTGATATTGCTTCGAGATACCTGCTATTCCCCCTTAAACGAGTTGTGGCAG
ATATACTTTTGCCTTATCTGGAGCATGTTTCACCTGCAGAACTATGCCACTGGCTAATGT
TATCAGACATTTATGATGTTGTGAAAATAAGGGAGTATTGCTTGGATATCATCGCTTGCA
ATTTTGAGATGTTTGCGGACACAAGAGAGTTCAGGGCATTGCTTTTGACACTTCCACCAC
CATCTGGAGATGACTCACTGCGAACAACTCGTCCCAGTGAACCTGGTACTGCAGGCAACA
CTGACCAAGGCAACCTTCTTGATGATTTGCGTGAGAAATGGTTAGAAGCAGAGGCTGCTG
AGCTAGACGAGAGAGATGAGAGTGCAAAGCTGTTTGACAACCGATTGGAAATGCTTATGC
TTGTAGCAGAACAAGAAGCCAATGATGGCAATGTTTGACTCCACTGAG