Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os06t0311600-01
CDS Infomation	cds chromosome:IRGSP-1.0:6:11877604:11881764:1 gene:Os06g0311600 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:MAN6 description:Similar to Mannan endo-1,4-beta-mannosidase 6. (Os06t0311600-01)
Sequence	ATGCGGCAGGAGAGGCGGCTGTACAGCCTCCTCGGCCTCCTCCTCCTCCTCGCCGTCGTC TACCTCACCTGGTTCCCGACGACCCACGACGGCGGCGGGGGCGGTGGTGGGGGGTGGGTC AAGCTGCCGGTGCCGTGGCTCCAGCCGCGGATGCCCTTCGCGGCGCGCCGCGGCACCCAC TTCGTCGACGCCGACACGGGGTCGCCGCTCTACGTCAACGGCTGGAACTCCTACTGGCTC CTCCCCGCGCGGTCCCCGGCGCTCGCCGCCGAGATGCTGCGCCGGGGACGCCGGATGGGG CTCTCCGTCTGCCGCACCTGGGCGTTCAGCGACGGCGGCCCCGGCGCGCTCCAGATCTCC CCCGGCCGCTTCAGCGAGGCCGTCTTCCAGGTATTGGATTATGTCATATATGAAGCCCGG AGAAATCATATTAGATTGATTCTTTGCCTTGTGAACAACCTCGATAACCTTGGAGGGAAG GCTCAATATGTCCAGTGGGCACAAGCAGCTGGAGCTAATATGACAAATTCAACTGATTCT TTTTATTCACATCCAACTATTAAGCGTTACTACAAGGATTATGTGAAGGCAATATTGACC AGAAGAAACTCTTACAGTCGAATAAGATACTCTGATGAACCTGCTATATTTGCTTGGGAA CTCATGAATGAGCCTAGGTGTGTGTCCAACTCATCTGGCCCCTACCTTCAGGCTTGGATT GCAGAGATGGCTGCATATGTAAAAAGTTTGGACACTAATCATCTAGTTACAGTTGGAACT GAAGGGTTTTATGGTCCTGGAATAGCTGAAAGACTGGGTGTTAATCCCGGGGAATGGGCA GCTTCACTTTGCTCAGACTTCATACAAAACTCAGCAGTTGAACATATTGATTTTGCTTCT GTTCATGCTTATCCCGATAGCTGGTTACCAAGGGCAAGCTTGGAAGAAAAAGTCAGATAT CTTTCCAATTGGGTTGATTCACACCTGAATGACAGTGAACAAATCTTGAAAAAACCTGTC CTATTTACAGAAGTAGGCTACCTCCAGCATTCAGATGCAAACAGTAACAGCACAGTTGAT AGAGACATTATTCTAAGAATTGTTTATGATAAAATCTATGATTCGGCAAGAAAGCTGCAG GCGGGTAGTGGTGCTCTTATCTGGCAGTTGATGGTTGAAGGAACACACATGTATGGTGAT AATTTCTCCGTTGTGGCACGGGATCGTCCCTCGACTTATAGTTTGATAACCAATCAGTCA TGTCGTTTGCAAAGGCTGTATGGAGAAGGAGACCCTGGGTGGCAATGCTCAATACCACCC TAA

Peptide Sequence

PEP ID	Os06t0311600-01
PEP Infomation	pep chromosome:IRGSP-1.0:6:11877604:11881764:1 gene:Os06g0311600 transcript:Os06t0311600-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:MAN6 description:Similar to Mannan endo-1,4-beta-mannosidase 6. (Os06t0311600-01)
Sequence	MRQERRLYSLLGLLLLLAVVYLTWFPTTHDGGGGGGGGWVKLPVPWLQPRMPFAARRGTH FVDADTGSPLYVNGWNSYWLLPARSPALAAEMLRRGRRMGLSVCRTWAFSDGGPGALQIS PGRFSEAVFQVLDYVIYEARRNHIRLILCLVNNLDNLGGKAQYVQWAQAAGANMTNSTDS FYSHPTIKRYYKDYVKAILTRRNSYSRIRYSDEPAIFAWELMNEPRCVSNSSGPYLQAWI AEMAAYVKSLDTNHLVTVGTEGFYGPGIAERLGVNPGEWAASLCSDFIQNSAVEHIDFAS VHAYPDSWLPRASLEEKVRYLSNWVDSHLNDSEQILKKPVLFTEVGYLQHSDANSNSTVD RDIILRIVYDKIYDSARKLQAGSGALIWQLMVEGTHMYGDNFSVVARDRPSTYSLITNQS CRLQRLYGEGDPGWQCSIPP

Transcript Sequence

Transcript ID	Os06t0311600-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:6:11877604:11881764:1 gene:Os06g0311600 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:MAN6 description:Similar to Mannan endo-1,4-beta-mannosidase 6. (Os06t0311600-01)
Sequence	CCACACCCAACGCTCCGCCGCCTCCTGCGCGCGGCGTCGTCGGCGGCGGCGGAGCGATGC GGCAGGAGAGGCGGCTGTACAGCCTCCTCGGCCTCCTCCTCCTCCTCGCCGTCGTCTACC TCACCTGGTTCCCGACGACCCACGACGGCGGCGGGGGCGGTGGTGGGGGGTGGGTCAAGC TGCCGGTGCCGTGGCTCCAGCCGCGGATGCCCTTCGCGGCGCGCCGCGGCACCCACTTCG TCGACGCCGACACGGGGTCGCCGCTCTACGTCAACGGCTGGAACTCCTACTGGCTCCTCC CCGCGCGGTCCCCGGCGCTCGCCGCCGAGATGCTGCGCCGGGGACGCCGGATGGGGCTCT CCGTCTGCCGCACCTGGGCGTTCAGCGACGGCGGCCCCGGCGCGCTCCAGATCTCCCCCG GCCGCTTCAGCGAGGCCGTCTTCCAGGTATTGGATTATGTCATATATGAAGCCCGGAGAA ATCATATTAGATTGATTCTTTGCCTTGTGAACAACCTCGATAACCTTGGAGGGAAGGCTC AATATGTCCAGTGGGCACAAGCAGCTGGAGCTAATATGACAAATTCAACTGATTCTTTTT ATTCACATCCAACTATTAAGCGTTACTACAAGGATTATGTGAAGGCAATATTGACCAGAA GAAACTCTTACAGTCGAATAAGATACTCTGATGAACCTGCTATATTTGCTTGGGAACTCA TGAATGAGCCTAGGTGTGTGTCCAACTCATCTGGCCCCTACCTTCAGGCTTGGATTGCAG AGATGGCTGCATATGTAAAAAGTTTGGACACTAATCATCTAGTTACAGTTGGAACTGAAG GGTTTTATGGTCCTGGAATAGCTGAAAGACTGGGTGTTAATCCCGGGGAATGGGCAGCTT CACTTTGCTCAGACTTCATACAAAACTCAGCAGTTGAACATATTGATTTTGCTTCTGTTC ATGCTTATCCCGATAGCTGGTTACCAAGGGCAAGCTTGGAAGAAAAAGTCAGATATCTTT CCAATTGGGTTGATTCACACCTGAATGACAGTGAACAAATCTTGAAAAAACCTGTCCTAT TTACAGAAGTAGGCTACCTCCAGCATTCAGATGCAAACAGTAACAGCACAGTTGATAGAG ACATTATTCTAAGAATTGTTTATGATAAAATCTATGATTCGGCAAGAAAGCTGCAGGCGG GTAGTGGTGCTCTTATCTGGCAGTTGATGGTTGAAGGAACACACATGTATGGTGATAATT TCTCCGTTGTGGCACGGGATCGTCCCTCGACTTATAGTTTGATAACCAATCAGTCATGTC GTTTGCAAAGGCTGTATGGAGAAGGAGACCCTGGGTGGCAATGCTCAATACCACCCTAAA GACTGCTGCTACTGGTACAGAAAATTCCCGTTCTATAAAACACAAACTCTTTTTGCAGCA TCATTCGAGAAGCAAACCATGGACAGAGAAGCCTGTATAGTAAACATGCTGTCGAGTGCT GATAGCTTGAGTGACAGACTGCCAGTAGAGAATCAACTTCAAGTTTTCAACAACGGCAGG GAGGCAGTTCTTTGCCGGTGGCTATTGAATCTCAACATGGTAATGATATATATTCACATG GTTTAGCAGTATTCTTGATTCTCGACCACATTTTTATGGCCGTCAGCAATATATATCCCT ATAAACGATTCTCTCAAGGTGCATATTAAACTTAATTTGCTCATAGTCAGTCACAGGAAT AGCAAGGGTAGTTTTAGAAACGTTTCTGTATTGGCCATATGAGGCCAATCATGACGTTTT ATTCGTTGTTTTTTTTCACGGCATTCTGTGGTTGCATTGCGCGTGAACAAAAACATGTTT TGTAACCCTGTATTAGTATGCGCTATATGCGGTGCAAGATATGATCCCGATTCTCGAGAC C