Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os06t0309000-01
CDS Infomation	cds chromosome:IRGSP-1.0:6:11726018:11734594:-1 gene:Os06g0309000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Zinc finger, RING/FYVE/PHD-type domain containing protein. (Os06t0309000-01)
Sequence	ATGGGGAGCGGGCGGGAGCGGAAGCGGCGGCGGAGGGGGGAGATGGGGCGGGTGGCGGGG ATGGTGATGGTGCTCGCGGCGGCGGGGCAGGCGCGGGGCGGGGGCGCGCCCACGGCGGCG GAGCGCGCGCTCGCGGCGGTGGCGCGGGAGCGGCTGCTGGAGGCGGCGGAGTTGCTGGCG CGGCCCAGGGAGCTGTTCCCGAGGGAGGCGGTGCGGGCGCTCGTGGAGGACCTCGGCCTC GCCCGCGGCAGGGACCCCTCCGCCATGGGCTACCGCCCGCGCAGGGCCTCCATCGCCGAG AGGATCCTCCTCACCAAGCGCAAGATGGAAGAAATCAAGGAGGCTCCAGTGTATCCAACA ACTAATGTGTCTCAAACAACAGCCACGAGAGCAACAACTGTCTTCCAACATGGAGCTTCT AAGCCAACTACTGGGTTGCCCATGAATATTTCAGCTGTTGCCTCATTCCCTGTCACAACC CCACCTACTATACCATCCCCAAATATCTTGAAGCAGACACAGTTAAATGAATCACCATCA GGAGTGAAAGCAGCTGGTACCTCTTCAATTGTTTCAGTACCATCTGTTGGTCCTACAAAT ATTAAAGTGGAAAAGGGTGTTAATAGTCCTACTTGCACACAAAATGGAGCAACTATAGGT CAAGCAAATAAATCAGCTCATCTTACAGCAACTATGTCTAATCCAAATATAGTACCTTCT TCCAGTCATGAAGGGACGCCTCAGCATGAAAAGGCACCTGTAATTCGACCCATCACCGTA AAAAATGGTATGACACATCAATCTCGACCTGGAGTATCATTTATTCAGCGACAATCCACC TTTCCCAATCATAGTGCAATTGCAAAAACGGTTCAACAAGTTCTGCATCAACCTGTCAAT CATCCTAACTGGATCCCACCATCAACTGAGTATATGCGTAGTGGGCTAGGTTGTCAAGTA TGTAAAGTTTTTATCATCGACATACATAGTATGATTATTTGTGATGCTTGTGAGAGGGGC ATACACTTAAAATGCCTTCAGCATGACGGGGTCAATGTTCTACCACCTAAAGCTGAGTGG TATTGTCCAACATGTGTAGCTCGTAGCAAGGGAAAACCCCTGCCTCCGAAATATGGCAAG GTTACAAGAACTGTTGTTGCACCAAAGGTTAATCTTATTAGTGGAGTTCCTTCGCAGGGA GTTTCTGAAAATCGAACTACAAAGGATAATAATCAAGAACTTGCAGCAGATGGAACAGTT ATCGATAAAAACTCCAGTGAAGCTAACAGGATTGTACATAATAGTGATAAGTTGGCTTTG GAGAGTTCAAAAGAACAATCACAATCAGGCTCTGCTTCTGCAGCTGTTGATAAGGGAAGA GGAAAACCTCAAGGTGTGGGAACAATGGAAAATAATGCCATTTCAGAACGTGGCAATGTT CATGAGTTGACATCGAATGGGGATTTATCTACAAAGAATGAAATTGTTATAGGCGATGCT AAGGATAAAACTATTGTTTGCAGCACAGATCACAGTATTGTGGGTTGGGTTGGTGATCCT CTCAGAGTAGTCGAGAACAAGACTTACTATTACTCTTGTAACATTGATGGTATAGCATAC AATCTTGATGATCATATTTTGGTTGCCTCCAAAGATAAGGAGTCTGCTCCATCCAAGCTG CAGTCACTGTGGGAAGAGCATGATTCTAGGTCTAAGATGGCTTTGGTTAGTCCATATTTC TTTGCTTCAGATATTCCAGAATTGATCAGTAAACCATGCACTGCAGAAGAGAATGAGGTA TTTGCTTCCTGTAATCAAAGAACTGTAACAGTTTCCGCGATTTGTGGCCAATGTGAGGTT CTTCATGTTGACAAGTTTAGAGAAGAAACTAAGGGAAGTCAGGTTGTCAGTAGTAGGCTA CATCCAATTTTCCTCTGCAGGTGGAAGTATGATGAATCAACAAGCAGTTTCAGTAGTGTC AATAATTAG

Peptide Sequence

PEP ID	Os06t0309000-01
PEP Infomation	pep chromosome:IRGSP-1.0:6:11726018:11734594:-1 gene:Os06g0309000 transcript:Os06t0309000-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Zinc finger, RING/FYVE/PHD-type domain containing protein. (Os06t0309000-01)
Sequence	MGSGRERKRRRRGEMGRVAGMVMVLAAAGQARGGGAPTAAERALAAVARERLLEAAELLA RPRELFPREAVRALVEDLGLARGRDPSAMGYRPRRASIAERILLTKRKMEEIKEAPVYPT TNVSQTTATRATTVFQHGASKPTTGLPMNISAVASFPVTTPPTIPSPNILKQTQLNESPS GVKAAGTSSIVSVPSVGPTNIKVEKGVNSPTCTQNGATIGQANKSAHLTATMSNPNIVPS SSHEGTPQHEKAPVIRPITVKNGMTHQSRPGVSFIQRQSTFPNHSAIAKTVQQVLHQPVN HPNWIPPSTEYMRSGLGCQVCKVFIIDIHSMIICDACERGIHLKCLQHDGVNVLPPKAEW YCPTCVARSKGKPLPPKYGKVTRTVVAPKVNLISGVPSQGVSENRTTKDNNQELAADGTV IDKNSSEANRIVHNSDKLALESSKEQSQSGSASAAVDKGRGKPQGVGTMENNAISERGNV HELTSNGDLSTKNEIVIGDAKDKTIVCSTDHSIVGWVGDPLRVVENKTYYYSCNIDGIAY NLDDHILVASKDKESAPSKLQSLWEEHDSRSKMALVSPYFFASDIPELISKPCTAEENEV FASCNQRTVTVSAICGQCEVLHVDKFREETKGSQVVSSRLHPIFLCRWKYDESTSSFSSV NN

Transcript Sequence

Transcript ID	Os06t0309000-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:6:11726018:11734594:-1 gene:Os06g0309000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Zinc finger, RING/FYVE/PHD-type domain containing protein. (Os06t0309000-01)
Sequence	GTGTGGCTGTGTCGCAAAAATCTTCCCCAATCTCGCTCGCTCTCCGCCCCCCCTCGCTTC GCTTCGCGCCGCGCTCCAACGATCCACCGCCACCCTCGCGCCAAACCGAGCCATTTCAAA ACTCCTCCCCCCGCCCTTCCCGAACCTTCTAGAAGCCCCTCCCCTCCCCTTCCCGCGCAC GGGGGATGGGGAGCGGGCGGGAGCGGAAGCGGCGGCGGAGGGGGGAGATGGGGCGGGTGG CGGGGATGGTGATGGTGCTCGCGGCGGCGGGGCAGGCGCGGGGCGGGGGCGCGCCCACGG CGGCGGAGCGCGCGCTCGCGGCGGTGGCGCGGGAGCGGCTGCTGGAGGCGGCGGAGTTGC TGGCGCGGCCCAGGGAGCTGTTCCCGAGGGAGGCGGTGCGGGCGCTCGTGGAGGACCTCG GCCTCGCCCGCGGCAGGGACCCCTCCGCCATGGGCTACCGCCCGCGCAGGGCCTCCATCG CCGAGAGGATCCTCCTCACCAAGCGCAAGATGGAAGAAATCAAGGAGGCTCCAGTGTATC CAACAACTAATGTGTCTCAAACAACAGCCACGAGAGCAACAACTGTCTTCCAACATGGAG CTTCTAAGCCAACTACTGGGTTGCCCATGAATATTTCAGCTGTTGCCTCATTCCCTGTCA CAACCCCACCTACTATACCATCCCCAAATATCTTGAAGCAGACACAGTTAAATGAATCAC CATCAGGAGTGAAAGCAGCTGGTACCTCTTCAATTGTTTCAGTACCATCTGTTGGTCCTA CAAATATTAAAGTGGAAAAGGGTGTTAATAGTCCTACTTGCACACAAAATGGAGCAACTA TAGGTCAAGCAAATAAATCAGCTCATCTTACAGCAACTATGTCTAATCCAAATATAGTAC CTTCTTCCAGTCATGAAGGGACGCCTCAGCATGAAAAGGCACCTGTAATTCGACCCATCA CCGTAAAAAATGGTATGACACATCAATCTCGACCTGGAGTATCATTTATTCAGCGACAAT CCACCTTTCCCAATCATAGTGCAATTGCAAAAACGGTTCAACAAGTTCTGCATCAACCTG TCAATCATCCTAACTGGATCCCACCATCAACTGAGTATATGCGTAGTGGGCTAGGTTGTC AAGTATGTAAAGTTTTTATCATCGACATACATAGTATGATTATTTGTGATGCTTGTGAGA GGGGCATACACTTAAAATGCCTTCAGCATGACGGGGTCAATGTTCTACCACCTAAAGCTG AGTGGTATTGTCCAACATGTGTAGCTCGTAGCAAGGGAAAACCCCTGCCTCCGAAATATG GCAAGGTTACAAGAACTGTTGTTGCACCAAAGGTTAATCTTATTAGTGGAGTTCCTTCGC AGGGAGTTTCTGAAAATCGAACTACAAAGGATAATAATCAAGAACTTGCAGCAGATGGAA CAGTTATCGATAAAAACTCCAGTGAAGCTAACAGGATTGTACATAATAGTGATAAGTTGG CTTTGGAGAGTTCAAAAGAACAATCACAATCAGGCTCTGCTTCTGCAGCTGTTGATAAGG GAAGAGGAAAACCTCAAGGTGTGGGAACAATGGAAAATAATGCCATTTCAGAACGTGGCA ATGTTCATGAGTTGACATCGAATGGGGATTTATCTACAAAGAATGAAATTGTTATAGGCG ATGCTAAGGATAAAACTATTGTTTGCAGCACAGATCACAGTATTGTGGGTTGGGTTGGTG ATCCTCTCAGAGTAGTCGAGAACAAGACTTACTATTACTCTTGTAACATTGATGGTATAG CATACAATCTTGATGATCATATTTTGGTTGCCTCCAAAGATAAGGAGTCTGCTCCATCCA AGCTGCAGTCACTGTGGGAAGAGCATGATTCTAGGTCTAAGATGGCTTTGGTTAGTCCAT ATTTCTTTGCTTCAGATATTCCAGAATTGATCAGTAAACCATGCACTGCAGAAGAGAATG AGGTATTTGCTTCCTGTAATCAAAGAACTGTAACAGTTTCCGCGATTTGTGGCCAATGTG AGGTTCTTCATGTTGACAAGTTTAGAGAAGAAACTAAGGGAAGTCAGGTTGTCAGTAGTA GGCTACATCCAATTTTCCTCTGCAGGTGGAAGTATGATGAATCAACAAGCAGTTTCAGTA GTGTCAATAATTAGATGAGATTCTGTCATTCTTTTGAATCACAACTGTACATTTGAGATG CTAGTATCAGCTGTTTTGCCTAGATGTTTAAACGAAGTGGGAAGAAAGCTACACCCCTTG GAAAAATTTTATGCAAGTTGGAGAGCAGCGAGTCCATGTTCCTTCAGGCGTTCATTACCT GTGCAAATCTTCGCTGCTTTAATTAGGTTCACCCTTCTTAACAGAGTAGTGGTGAGGCTC GTTACAGTCAAAATCTATGCGTGAAACTTTATACACGTGTTTGATGCAAACATCCAATCC AAACGTTCCTCTGTAAAACTTCTCTCAGCGGTTTACTTGCCGTTCTTTCTTTC