Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os06t0308200-01
CDS Infomation

cds chromosome:IRGSP-1.0:6:11693031:11695275:1 gene:Os06g0308200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to 60S ribosomal protein L15. (Os06t0308200-01)
Sequence

ATGGGGGCTTACAGGTGCGTGTCGGAGCTATGGAGGAGGAAGCAGTCGGACGTGATGACG
TTCGTGCAGCGCGTGCGGTGCTGGGATCACCGGCGGCAGCCGGCCATCGGGCGCCCCACC
CGCCCCGACAAGGCCCGCCGCCTCGGCGACAAGGCCAAGCAGGTCCCCTGCCCCCACCGC
TTCCTACCCATGGCCGCTGCCGCCGCCACCCGCCCCCTCCTCCGGCCCACCTGCTCTGTT
GCTAGATTCAACACGCGCCGCCTCCTCTCCTCCACATCTTCACCTCCACCTACCAACCGC
AGCTCCAACACCAACTCTCCTGTCGCCTTCGACTGGTCTGATGATGACGACAACCCCTCC
CCACCTCCAATGGAAGCTAAGAGCCCCAATCTCCCGCTGCCATACGACCCCTTCAGCAAG
AAGCCTGCAGTCATGGAGCCATCTGACCCCACGAACCTCCAGGAGGTCTTCCATCGGATG
CGCACCGAGGGCCTCACCGACTATGCCATCAAGATGTTCGACGGATTGTCGAAGGACGGG
CTCACCCACGAGGCACTGGAGCTCTTCGCGATCATCAAGGACAAGGGTGCCATGCCCGAT
GTGGTCGCGCACACTGCCGTCCTAGAGGCCTATGCCAATGCTGGCCCCGCCCATTGGCGT
GACGTTGTGCGCACCTACGACCGTATGCTCGCGTCAGGGGTCACGCCTAACGCGTATACG
CTCGCGGTTCTGGTTAAGGGGCTCGCAGCTAGCGACCGGTTCATGGAGGCTGGCAAGTAC
ATAGTGGAAATGCTTGACCGCGGAATGCGACCAAATGCAGCGACATACCTGGCTGTGTTT
GAGGCATACGTGAGGATGGAGAAGGTGGAAGAAGGCAGAGTTCTTCTGGAAACAATGAAG
AGTAAGGGGTTCACTCCAAGTGAGGAAGCAGTGCGAAGCGGCACGGTGAAGCGAGGGCAT
GTGTTCAGGGGCATCATGAACATGCTCTTTGACAAGTGA

Peptide Sequence

PEP ID

Os06t0308200-01
PEP Infomation

pep chromosome:IRGSP-1.0:6:11693031:11695275:1 gene:Os06g0308200 transcript:Os06t0308200-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to 60S ribosomal protein L15. (Os06t0308200-01)
Sequence

MGAYRCVSELWRRKQSDVMTFVQRVRCWDHRRQPAIGRPTRPDKARRLGDKAKQVPCPHR
FLPMAAAAATRPLLRPTCSVARFNTRRLLSSTSSPPPTNRSSNTNSPVAFDWSDDDDNPS
PPPMEAKSPNLPLPYDPFSKKPAVMEPSDPTNLQEVFHRMRTEGLTDYAIKMFDGLSKDG
LTHEALELFAIIKDKGAMPDVVAHTAVLEAYANAGPAHWRDVVRTYDRMLASGVTPNAYT
LAVLVKGLAASDRFMEAGKYIVEMLDRGMRPNAATYLAVFEAYVRMEKVEEGRVLLETMK
SKGFTPSEEAVRSGTVKRGHVFRGIMNMLFDK

Transcript Sequence

Transcript ID

Os06t0308200-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:6:11693031:11695275:1 gene:Os06g0308200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to 60S ribosomal protein L15. (Os06t0308200-01)
Sequence

AGGGCCTGGCTCTCCCGCTCCACCTCCCCGCGGCCGCCGCTCGCCGCTCTCCGCCGCCGC
AGAGACATGGGGGCTTACAGGTGCGTGTCGGAGCTATGGAGGAGGAAGCAGTCGGACGTG
ATGACGTTCGTGCAGCGCGTGCGGTGCTGGGATCACCGGCGGCAGCCGGCCATCGGGCGC
CCCACCCGCCCCGACAAGGCCCGCCGCCTCGGCGACAAGGCCAAGCAGGTCCCCTGCCCC
CACCGCTTCCTACCCATGGCCGCTGCCGCCGCCACCCGCCCCCTCCTCCGGCCCACCTGC
TCTGTTGCTAGATTCAACACGCGCCGCCTCCTCTCCTCCACATCTTCACCTCCACCTACC
AACCGCAGCTCCAACACCAACTCTCCTGTCGCCTTCGACTGGTCTGATGATGACGACAAC
CCCTCCCCACCTCCAATGGAAGCTAAGAGCCCCAATCTCCCGCTGCCATACGACCCCTTC
AGCAAGAAGCCTGCAGTCATGGAGCCATCTGACCCCACGAACCTCCAGGAGGTCTTCCAT
CGGATGCGCACCGAGGGCCTCACCGACTATGCCATCAAGATGTTCGACGGATTGTCGAAG
GACGGGCTCACCCACGAGGCACTGGAGCTCTTCGCGATCATCAAGGACAAGGGTGCCATG
CCCGATGTGGTCGCGCACACTGCCGTCCTAGAGGCCTATGCCAATGCTGGCCCCGCCCAT
TGGCGTGACGTTGTGCGCACCTACGACCGTATGCTCGCGTCAGGGGTCACGCCTAACGCG
TATACGCTCGCGGTTCTGGTTAAGGGGCTCGCAGCTAGCGACCGGTTCATGGAGGCTGGC
AAGTACATAGTGGAAATGCTTGACCGCGGAATGCGACCAAATGCAGCGACATACCTGGCT
GTGTTTGAGGCATACGTGAGGATGGAGAAGGTGGAAGAAGGCAGAGTTCTTCTGGAAACA
ATGAAGAGTAAGGGGTTCACTCCAAGTGAGGAAGCAGTGCGAAGCGGCACGGTGAAGCGA
GGGCATGTGTTCAGGGGCATCATGAACATGCTCTTTGACAAGTGATGCGGTATGCATTGT
TTCTTGATAGGAAATTGTTGGGCTGTGACTCTTCGTATAGAATGGATGGATATTCTTCTC
GGGAAGTGTGTCACCATTCCATTTGGAGAAAATGATCAGATGCACCGTTTTCTTTTCTTG
TGTCACTGTAGTATCTTAGGTTCTCTGTCTCTACTAGATTTTATTAGGTAGATAGCATTT
TCAAGGGATACTTTTGTCAATGTAGGAACATCCCTTGTAACTGTAATTGGCTTAGGTAAT
ATAGTTCTATAACATGTTTTTGGTGCACTATTTTGCTTGGAATTGGCATGGTACATTGGT
TTGTCTGTATTTACTGTATTAGTTATGATGTGCTCCCTCCATTTTTTAATATGTGCCGTA
TATTGAAAACGGAGGGAGTGCCATTAGCAATCTGCTGCTCATGGTTGAT