Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os06t0304600-02
CDS Infomation

cds chromosome:IRGSP-1.0:6:11487003:11494269:-1 gene:Os06g0304600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Peptidase aspartic, catalytic domain containing protein. (Os06t0304600-01);Similar to Aspartic proteinase nepenthesin-2. (Os06t0304600-02)
Sequence

ATGGAGGTGCTTCTTCCCCTTCTCCTTGCCTGCTCTCTCCTCTTCACCATTGCAACCCCT
ATCAGAGACATCACCGACGTTTGTGCCTCACAGATCAGTGATTTCCAGCACCTGAACAGC
TCCGGACTGCACCTGACGCTGCACCACCCGCAGAGCCCCTGCTCGCCGGCGCCGCTCCCC
TCCGACCTCCCCTTCTCCGCCGTCGTCACCCACGACGACGCCCGCATCGCCCACCTCGCC
TCGCGCCTCGCCAACAACCACCCGACATCGCCGTCGTCATCGTCTCTCCTCCACGGCCAC
CGCAAGAAGAAGGCCGGCGGCGTCGGCGGCTCGCAGGCGTCGTCGTCGTCCGTGCCGCTG
ACGCCGGGCGCGTCGGTGGCCGTCGGCAACTACGTGACCCGCCTGGGCCTCGGCACGCCG
GCGACCTCCTACGTGATGGTGGTCGACACGGGGTCGTCGCTCACCTGGCTGCAGTGCTCC
CCGTGCTCGGTGTCGTGCCACCGGCAGGCCGGCCCGGTGTTCGACCCGCGCGCGTCGGGC
ACGTACGCCGCCGTGCAGTGCTCCTCGTCGGAGTGCGGCGAGCTCCAGGCCGCCACGCTC
AACCCCTCCGCCTGCTCCGTCTCCAACGTCTGCATCTACCAGGCCAGCTACGGCGACAGC
TCCTACTCCGTCGGCTACCTCAGCAAGGACACCGTCTCCTTCGGCTCCGGCAGCTTCCCG
GGCTTCTACTACGGCTGCGGCCAAGACAACGAGGGCCTCTTCGGCCGCTCCGCGGGGCTC
ATCGGCCTCGCCAAGAACAAGCTCTCGCTGCTCTACCAGCTCGCCCCGAGCCTCGGCTAC
GCCTTCTCCTACTGCCTCCCGACCTCGTCGGCGGCGGCGGGCTACCTCTCCATCGGCTCG
TACAACCCCGGCCAGTACTCGTACACGCCCATGGCGTCCAGCTCCCTCGACGCCTCGCTC
TACTTCGTCACCCTGTCGGGGATCTCGGTCGCCGGGGCGCCGCTCGCCGTGCCGCCGTCG
GAGTACCGCAGCCTGCCGACGATCATCGACTCCGGCACGGTGATCACGCGGCTGCCGCCG
AACGTGTACACGGCGCTGAGCAGGGCCGTGGCCGCGGCCATGGCCAGCGCCGCGCCGCGG
GCGCCGACCTACTCCATCCTGGACACCTGCTTCCGGGGCTCCGCCGCGGGGCTGCGCGTC
CCGCGCGTGGACATGGCGTTCGCCGGCGGCGCGACGCTGGCGCTGTCCCCCGGGAACGTG
CTCATCGACGTCGACGACTCCACGACGTGCCTGGCGTTCGCGCCGACCGGCGGCACGGCG
ATCATCGGGAACACGCAGCAGCAGACGTTCAGCGTGGTGTACGACGTCGCGCAGTCCAGG
ATCGGCTTCGCCGCCGGCGGCTGCAGCTGA

Peptide Sequence

PEP ID

Os06t0304600-02
PEP Infomation

pep chromosome:IRGSP-1.0:6:11487003:11494269:-1 gene:Os06g0304600 transcript:Os06t0304600-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Peptidase aspartic, catalytic domain containing protein. (Os06t0304600-01);Similar to Aspartic proteinase nepenthesin-2. (Os06t0304600-02)
Sequence

MEVLLPLLLACSLLFTIATPIRDITDVCASQISDFQHLNSSGLHLTLHHPQSPCSPAPLP
SDLPFSAVVTHDDARIAHLASRLANNHPTSPSSSSLLHGHRKKKAGGVGGSQASSSSVPL
TPGASVAVGNYVTRLGLGTPATSYVMVVDTGSSLTWLQCSPCSVSCHRQAGPVFDPRASG
TYAAVQCSSSECGELQAATLNPSACSVSNVCIYQASYGDSSYSVGYLSKDTVSFGSGSFP
GFYYGCGQDNEGLFGRSAGLIGLAKNKLSLLYQLAPSLGYAFSYCLPTSSAAAGYLSIGS
YNPGQYSYTPMASSSLDASLYFVTLSGISVAGAPLAVPPSEYRSLPTIIDSGTVITRLPP
NVYTALSRAVAAAMASAAPRAPTYSILDTCFRGSAAGLRVPRVDMAFAGGATLALSPGNV
LIDVDDSTTCLAFAPTGGTAIIGNTQQQTFSVVYDVAQSRIGFAAGGCS

Transcript Sequence

Transcript ID

Os06t0304600-02
Transcript Infomation

cdna chromosome:IRGSP-1.0:6:11487003:11494269:-1 gene:Os06g0304600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Peptidase aspartic, catalytic domain containing protein. (Os06t0304600-01);Similar to Aspartic proteinase nepenthesin-2. (Os06t0304600-02)
Sequence

TACTGAACTTCTCTGAATTGAAGAAGCTTCCAGCTGAGCTGGGGGATCAAAATGGAGGTG
CTTCTTCCCCTTCTCCTTGCCTGCTCTCTCCTCTTCACCATTGCAACCCCTATCAGAGAC
ATCACCGACGTTTGTGCCTCACAGATCAGTGATTTCCAGCACCTGAACAGCTCCGGACTG
CACCTGACGCTGCACCACCCGCAGAGCCCCTGCTCGCCGGCGCCGCTCCCCTCCGACCTC
CCCTTCTCCGCCGTCGTCACCCACGACGACGCCCGCATCGCCCACCTCGCCTCGCGCCTC
GCCAACAACCACCCGACATCGCCGTCGTCATCGTCTCTCCTCCACGGCCACCGCAAGAAG
AAGGCCGGCGGCGTCGGCGGCTCGCAGGCGTCGTCGTCGTCCGTGCCGCTGACGCCGGGC
GCGTCGGTGGCCGTCGGCAACTACGTGACCCGCCTGGGCCTCGGCACGCCGGCGACCTCC
TACGTGATGGTGGTCGACACGGGGTCGTCGCTCACCTGGCTGCAGTGCTCCCCGTGCTCG
GTGTCGTGCCACCGGCAGGCCGGCCCGGTGTTCGACCCGCGCGCGTCGGGCACGTACGCC
GCCGTGCAGTGCTCCTCGTCGGAGTGCGGCGAGCTCCAGGCCGCCACGCTCAACCCCTCC
GCCTGCTCCGTCTCCAACGTCTGCATCTACCAGGCCAGCTACGGCGACAGCTCCTACTCC
GTCGGCTACCTCAGCAAGGACACCGTCTCCTTCGGCTCCGGCAGCTTCCCGGGCTTCTAC
TACGGCTGCGGCCAAGACAACGAGGGCCTCTTCGGCCGCTCCGCGGGGCTCATCGGCCTC
GCCAAGAACAAGCTCTCGCTGCTCTACCAGCTCGCCCCGAGCCTCGGCTACGCCTTCTCC
TACTGCCTCCCGACCTCGTCGGCGGCGGCGGGCTACCTCTCCATCGGCTCGTACAACCCC
GGCCAGTACTCGTACACGCCCATGGCGTCCAGCTCCCTCGACGCCTCGCTCTACTTCGTC
ACCCTGTCGGGGATCTCGGTCGCCGGGGCGCCGCTCGCCGTGCCGCCGTCGGAGTACCGC
AGCCTGCCGACGATCATCGACTCCGGCACGGTGATCACGCGGCTGCCGCCGAACGTGTAC
ACGGCGCTGAGCAGGGCCGTGGCCGCGGCCATGGCCAGCGCCGCGCCGCGGGCGCCGACC
TACTCCATCCTGGACACCTGCTTCCGGGGCTCCGCCGCGGGGCTGCGCGTCCCGCGCGTG
GACATGGCGTTCGCCGGCGGCGCGACGCTGGCGCTGTCCCCCGGGAACGTGCTCATCGAC
GTCGACGACTCCACGACGTGCCTGGCGTTCGCGCCGACCGGCGGCACGGCGATCATCGGG
AACACGCAGCAGCAGACGTTCAGCGTGGTGTACGACGTCGCGCAGTCCAGGATCGGCTTC
GCCGCCGGCGGCTGCAGCTGAGGACCCAAACTGCAGCTGGCCGACTCAAGCTAGGTAAAA
GAGCAATGCTGCTTCTTCTGCTGCTGCCGCCGCCTCCTATCTCTGCTCAGGCACAGAAGT
GACAACTTCTTAACTGCAAATTCATTCATCACATGTAAATGCATATACATGTGCCAGGAA
GTTACGAGTGTGGCTCTAGGACCTAGTTTTACATGTCATAAACAAATATAGATGTACAAA
TAAATACAGGGTAACTACTTTAGGTGAAGATAATACTTATCAATGTGAAAGATTATTATG
TTATATGGCTGCTTGTTAGCAATCAAGCCAAAATGTTCATCATGTACATGTAAACTATGG
GTGTGTTTGGGTTCTAAATGTTCAGGGTGAAAAGAAAAGCAGTATAAGAACATGAAGATT
TGAGTTA