Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os06t0301100-01
CDS Infomation

cds chromosome:IRGSP-1.0:6:11244763:11248655:-1 gene:Os06g0301100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to OSIGBa0124N08.6 protein. (Os06t0301100-01)
Sequence

ATGGCGGCGGCGGTGGCGGCGCAGCTCCGCGGGCCCTCGGCGGCGGCGGCGAGGAGGTGG
CCGGCCCCCTCCGGCGGCGTCCTCCGCTTCGCGCCGCTCGCTACGTCGACGGTCCCGGCG
TCGATCGCCCGGGGATCGCTCCGCGGGGTTCCCGCTGGCGTCGTGCTGCCCAAGCCATTG
ATAGCAATGTGCATGAAGGCGGAGTATACCAGCAGTCCTGTTGATCCTAATGCTGTCGCG
GAGCATACAGAAGATGAAAATCAACAGCCAACCACTGTATCGCCTACTAATGCAGAAATA
GACATAGACCAAGAGGCTGTTCCTCAACACAAGGGTGCAATAATACATGACTTTTGCCTA
GGGATCCCTTTTGGTGGAATTTTATTTTCCATGGGCCTTGTTGGATTTCTGTTTTGGAGG
AGTACCGTAAGTCTTACTTTCGGTGTTGCACCTGGCCTTGCAATATTGGCCCTTGGTGTG
CTTAGCCTTAAGGTTTGGAGGAGTGGCAAGTCAAGCTTGCCATTCATACTGGCACAAGCA
GCTGTTGCTGCTGCGGTAGCATGGAAGCACTTCCAGGCGTACACCACAACAAAGAAACTG
CTTCCCTGGGCTTTTTACACTGCACTCAGTGCCGCTATGATCTGCTTCTACTCATATGTG
CTACTTGCTGGGGGGAATCCACCACCAAAGAAGAAGGCAGCAGTTGCTCAATAA

Peptide Sequence

PEP ID

Os06t0301100-01
PEP Infomation

pep chromosome:IRGSP-1.0:6:11244763:11248655:-1 gene:Os06g0301100 transcript:Os06t0301100-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to OSIGBa0124N08.6 protein. (Os06t0301100-01)
Sequence

MAAAVAAQLRGPSAAAARRWPAPSGGVLRFAPLATSTVPASIARGSLRGVPAGVVLPKPL
IAMCMKAEYTSSPVDPNAVAEHTEDENQQPTTVSPTNAEIDIDQEAVPQHKGAIIHDFCL
GIPFGGILFSMGLVGFLFWRSTVSLTFGVAPGLAILALGVLSLKVWRSGKSSLPFILAQA
AVAAAVAWKHFQAYTTTKKLLPWAFYTALSAAMICFYSYVLLAGGNPPPKKKAAVAQ

Transcript Sequence

Transcript ID

Os06t0301100-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:6:11244763:11248655:-1 gene:Os06g0301100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to OSIGBa0124N08.6 protein. (Os06t0301100-01)
Sequence

GAGAGAGAGAGAGAGAGAGGCAGGAGAGTAGGAGACAGAAGGAGAGTTAGCCGCCGAGCA
CGACGACTCCTCCCTCTCCTCTCCCCTTCCGGCTTCCACGCGTCGGGAACCGAAGTCCAA
ACCGAGAGAACATCGACATGGCGGCGGCGGTGGCGGCGCAGCTCCGCGGGCCCTCGGCGG
CGGCGGCGAGGAGGTGGCCGGCCCCCTCCGGCGGCGTCCTCCGCTTCGCGCCGCTCGCTA
CGTCGACGGTCCCGGCGTCGATCGCCCGGGGATCGCTCCGCGGGGTTCCCGCTGGCGTCG
TGCTGCCCAAGCCATTGATAGCAATGTGCATGAAGGCGGAGTATACCAGCAGTCCTGTTG
ATCCTAATGCTGTCGCGGAGCATACAGAAGATGAAAATCAACAGCCAACCACTGTATCGC
CTACTAATGCAGAAATAGACATAGACCAAGAGGCTGTTCCTCAACACAAGGGTGCAATAA
TACATGACTTTTGCCTAGGGATCCCTTTTGGTGGAATTTTATTTTCCATGGGCCTTGTTG
GATTTCTGTTTTGGAGGAGTACCGTAAGTCTTACTTTCGGTGTTGCACCTGGCCTTGCAA
TATTGGCCCTTGGTGTGCTTAGCCTTAAGGTTTGGAGGAGTGGCAAGTCAAGCTTGCCAT
TCATACTGGCACAAGCAGCTGTTGCTGCTGCGGTAGCATGGAAGCACTTCCAGGCGTACA
CCACAACAAAGAAACTGCTTCCCTGGGCTTTTTACACTGCACTCAGTGCCGCTATGATCT
GCTTCTACTCATATGTGCTACTTGCTGGGGGGAATCCACCACCAAAGAAGAAGGCAGCAG
TTGCTCAATAAGTCGTGTCCTTTCGTGTTATCATAGTTGTACTGATATAGGAATGTGTTT
GCTTTTTTTTCCCTTTCTTTTCCATTGGTGAACAGCGAAAAGAATAAGTTGTATTCTACC
TTAGCTCATTTGGGTACATAACGAGAAGACCTAAG