Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os06t0301000-01
CDS Infomation	cds chromosome:IRGSP-1.0:6:11237438:11242796:-1 gene:Os06g0301000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:a homologue of yeast Hrd1 description:Zinc finger, RING/FYVE/PHD-type domain containing protein. (Os06t0301000-01)
Sequence	ATGATTCGGCTGCAGACGTACGCGGCGTTCAGCCTGATGGCGACGGCGACGGCGGTGTAC TACGCGTTCAGCAGCAGGGAGCAGTTCTACCCGGCGATGGTGTACCTCTCCACCTCCAAG ATCTGCTTCGTGCTGCTCCTCAACACGGGCCTCGTCGCCATGTGCGTCGCCTGGCAGCTC GTCAAGCGGCTCTTCCTGGGGACGCTCCGGGAGGCCGAGGTGGAGCGGCTCAACGAGCAG GCGTGGCGGGAGGTGGTGGAGATCCTCTTCGCGGTCACCATCTTCAGGCAGGACTTCTCC GTCTCCTTCCTCGCCATGGTCGCCGCGCTGCTGCTCGTCAAGGCGCTGCACTGGCTCGCG CAGAAGAGGGTCGAGTACATCGAGACCACGCCCTCCGTGCCCATGCTGTCGCACGCCAGG ATCGTCTCCTTCATGCTGTTCCTGCTCGTCGTCGACTGCCTCTTCCTGTCCAACTCGCTC AGGTCGCTCATACACAAGCGGGAGGCGTCTGTTGCAATCTTCTTTTCGTTTGAGTACATG ATACTAGCAACATCCACAGTATCGACATTCGTGAAATATATATTCTATGTCAGTGACATG CTAATGGAAGGTCAATGGGAGAAAAAGGCAGTGTATACATTTTACTTGGAGCTCATCAGT GACCTTGTACACTTGTCTTTGTATATGCTCTTCTTCATAGCTATCTTCCTGAACTATGGT GTCCCACTGCACTTGATACGTGAGCTGTATGAGACATTTCGCAACTTCAGAATCCGTATC GCGGATTATGTACGCTACAGAAAGATAACTTCCAACATGAATGAAAGATTTCCAGATGCC ACAGCAGATGAGCTCAATGCGAGTGATGCTACATGTATTATTTGCCGTGAGGAGATGACC ACAGCAAAAAAGCTGCTTTGTGGGCACCTGTTCCATGTCCATTGTTTGAGGTCATGGTTA GAACGCCAACACACTTGCCCTACATGTAGAGCTCCAATTCTGCCCCCAGATAATGGGCGT ACTGCAGCACGTCCGCATGGAGTTCATCCTGGAGTTCAGCCTGTTCCAGGTAATGGCACA CCAGGTTCAGAACGAGCAGCAGGTGAGAACATAAGCAGGCGCCAAGCAAAACTTGAAGCA GCTGCTTCGGCTGCTTCCCTATATGGGAGATCCTTTGCTTATCCTCCAGCGAACAATTTG AACAGGTATTCAACTCCTCCACAGTCTACATCAAATGGTCCACAATCAGGAGAAGCAAGT ACTTCCAATCAATCGCCAAAAGGCCATGCAACTGCCGATCCTTCAGCGCCTACTTTTTAT GCACGTGGTGCTGTTAGTTCAGTGACAACTACCAGGGAACTTGAAAGTTCACTGCAGAAG GCATATGAAAATGCTATAAAGAGCCAGATAGAGATGTTGCAAATCCAGCTGCAAATGTTT CAGCATGGGGCTACTTCATCAGCGACTAACAATGAAAACGGTGAGCACACAAAAAGCGAC TGA

Peptide Sequence

PEP ID	Os06t0301000-01
PEP Infomation	pep chromosome:IRGSP-1.0:6:11237438:11242796:-1 gene:Os06g0301000 transcript:Os06t0301000-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:a homologue of yeast Hrd1 description:Zinc finger, RING/FYVE/PHD-type domain containing protein. (Os06t0301000-01)
Sequence	MIRLQTYAAFSLMATATAVYYAFSSREQFYPAMVYLSTSKICFVLLLNTGLVAMCVAWQL VKRLFLGTLREAEVERLNEQAWREVVEILFAVTIFRQDFSVSFLAMVAALLLVKALHWLA QKRVEYIETTPSVPMLSHARIVSFMLFLLVVDCLFLSNSLRSLIHKREASVAIFFSFEYM ILATSTVSTFVKYIFYVSDMLMEGQWEKKAVYTFYLELISDLVHLSLYMLFFIAIFLNYG VPLHLIRELYETFRNFRIRIADYVRYRKITSNMNERFPDATADELNASDATCIICREEMT TAKKLLCGHLFHVHCLRSWLERQHTCPTCRAPILPPDNGRTAARPHGVHPGVQPVPGNGT PGSERAAGENISRRQAKLEAAASAASLYGRSFAYPPANNLNRYSTPPQSTSNGPQSGEAS TSNQSPKGHATADPSAPTFYARGAVSSVTTTRELESSLQKAYENAIKSQIEMLQIQLQMF QHGATSSATNNENGEHTKSD

Transcript Sequence

Transcript ID	Os06t0301000-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:6:11237438:11242796:-1 gene:Os06g0301000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:a homologue of yeast Hrd1 description:Zinc finger, RING/FYVE/PHD-type domain containing protein. (Os06t0301000-01)
Sequence	GAAGAAAAAAACACAAAAACCGAAAAGAAAAGAAAAAAAAAACAACAACAACAAGATTTT TTTTTTCCGCAAACCCTCTCGAACCAAAATCGCGGCGGCTTTATCCACGAATCAAAAAAA ATCCCCGCGACAATGTCTCCGCCCAATCTTTCCTCCTCCTCCTAGAGCCGGAGAATCCAC CCGCCATCACCATCGTGCTCGCAATCGCATCGCCTGTGGCGGGATCGCCGGCGGCGGCGG CGGAGATGATTCGGCTGCAGACGTACGCGGCGTTCAGCCTGATGGCGACGGCGACGGCGG TGTACTACGCGTTCAGCAGCAGGGAGCAGTTCTACCCGGCGATGGTGTACCTCTCCACCT CCAAGATCTGCTTCGTGCTGCTCCTCAACACGGGCCTCGTCGCCATGTGCGTCGCCTGGC AGCTCGTCAAGCGGCTCTTCCTGGGGACGCTCCGGGAGGCCGAGGTGGAGCGGCTCAACG AGCAGGCGTGGCGGGAGGTGGTGGAGATCCTCTTCGCGGTCACCATCTTCAGGCAGGACT TCTCCGTCTCCTTCCTCGCCATGGTCGCCGCGCTGCTGCTCGTCAAGGCGCTGCACTGGC TCGCGCAGAAGAGGGTCGAGTACATCGAGACCACGCCCTCCGTGCCCATGCTGTCGCACG CCAGGATCGTCTCCTTCATGCTGTTCCTGCTCGTCGTCGACTGCCTCTTCCTGTCCAACT CGCTCAGGTCGCTCATACACAAGCGGGAGGCGTCTGTTGCAATCTTCTTTTCGTTTGAGT ACATGATACTAGCAACATCCACAGTATCGACATTCGTGAAATATATATTCTATGTCAGTG ACATGCTAATGGAAGGTCAATGGGAGAAAAAGGCAGTGTATACATTTTACTTGGAGCTCA TCAGTGACCTTGTACACTTGTCTTTGTATATGCTCTTCTTCATAGCTATCTTCCTGAACT ATGGTGTCCCACTGCACTTGATACGTGAGCTGTATGAGACATTTCGCAACTTCAGAATCC GTATCGCGGATTATGTACGCTACAGAAAGATAACTTCCAACATGAATGAAAGATTTCCAG ATGCCACAGCAGATGAGCTCAATGCGAGTGATGCTACATGTATTATTTGCCGTGAGGAGA TGACCACAGCAAAAAAGCTGCTTTGTGGGCACCTGTTCCATGTCCATTGTTTGAGGTCAT GGTTAGAACGCCAACACACTTGCCCTACATGTAGAGCTCCAATTCTGCCCCCAGATAATG GGCGTACTGCAGCACGTCCGCATGGAGTTCATCCTGGAGTTCAGCCTGTTCCAGGTAATG GCACACCAGGTTCAGAACGAGCAGCAGGTGAGAACATAAGCAGGCGCCAAGCAAAACTTG AAGCAGCTGCTTCGGCTGCTTCCCTATATGGGAGATCCTTTGCTTATCCTCCAGCGAACA ATTTGAACAGGTATTCAACTCCTCCACAGTCTACATCAAATGGTCCACAATCAGGAGAAG CAAGTACTTCCAATCAATCGCCAAAAGGCCATGCAACTGCCGATCCTTCAGCGCCTACTT TTTATGCACGTGGTGCTGTTAGTTCAGTGACAACTACCAGGGAACTTGAAAGTTCACTGC AGAAGGCATATGAAAATGCTATAAAGAGCCAGATAGAGATGTTGCAAATCCAGCTGCAAA TGTTTCAGCATGGGGCTACTTCATCAGCGACTAACAATGAAAACGGTGAGCACACAAAAA GCGACTGAAGTTGTAAATAAGGGGAAGGTGAGGGCTGAACAAACAAAGGATATATAGATG GTGACTTGGCAAATACCCGAGGAGAAACTCCCATGCCATGCTTTATTTCGATTTTGGTAG GCTCGTTCATTTGTATGTCCATGTTAGAGGCCTCCTATCAACATCAGATATTTATTTGCT TAATGTGGTCATTTGAGTAGAGATGCAGTGTTGTAACTACGACTAATTTCAGATTAGCAC ATCTGGGAAAAAGCAACATGATTCTTCAATCTGAACCATCAGTATGCTCCCTCTTTTTTC TGGCATTTTTGTTTGTACGCTATAGTTGGATTTATACTGTCCAGACATTCAATACTGAAT TTAATAAATGTGAATATGGTTTAAGTCGCTC