Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os06t0300800-02
CDS Infomation	cds chromosome:IRGSP-1.0:6:11220341:11228544:1 gene:Os06g0300800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:OsWD40-128 description:Hypothetical conserved gene. (Os06t0300800-01);WD40 repeat-like domain containing protein. (Os06t0300800-02)
Sequence	ATGCAGCTGCTCGGGAACACGGCGCCCACGCACCTCGAGTCGGCGGTGTCCATGCCGATG CCGTCGGAGTTCTCCGCCGCCGCGGCTGTGGCGCCGCCCGCGCCGCTGCCCGCGATGCCG TCCGCGCCGCCCGCGAGGATGCCGAGCAGCAGCAGCAGCAAGATGCCGAGGGGGAGGCTC CTGGGGCCAGGGGACCGGGCCGTGCACGACGTGGACTCGCGGCTGCCAGGCGAGGCGCAG CCGCCTCAGCTGGAGGTGACGCCCATCACCAAGTACACGTCGGACCCGGGGCTGGTGCTC GGCAGGCAGATCGCCGTGAACCGGACCTACATCGTGTATGGCCTCAAGCTCGGCAACATC CGCGTGCTCAACATCAACACCGCGCTTCGCTCGCTCCTCCGCGGGCACACACAGAGGGTT ACGGACATGGCTTTCTTTGCGGAAGATGTCCATCGGTTAGCAAGTGCAAGTGTAGATGGG CGGATCTATGTATGGAAGATTGACGAGGGACCTGATGAGCAGAATAAACCACAAATCACA GGAAAGATTGAAATTGCCATACAGATTGTAGGAGATGCTGAAACTTACCATCCAAGAATA TGTTGGCACTCCCATAAGCAAGAGATTCTGTTTGTTGGAGTTGCTAACTGCGTCTTAAAA ATAGACACAACAAAAGTAGGAAGAGGAATGGACTTCAGTAGAGAAGAACCTCTTAAATGC CCACTCGACAAGCTGGTCGATGGCGTTCACTTGGTTGGTAAACATGATGCAGATATTACA GATTTGTCCCTATCTCAATGGATGACTACTCGTCTTGCTTCCGCATCAAAAGATGGCATG GTAAAGATCTGGGATGATCGCAAATCTGTGCCTCTGTCTGTTCTGAAACCACATGATGGT CAAGCTGTTTACTCTGTTTCTTTCCTTACGGCACCTGAGCATCCCCAGCATATAAATCTC ATCACAGCAGGCCCTCTCAATCGAGAAGTAAAAATTTGGGCTTCCACTAATGATGAAGGT TGGTTGTTGCCAAGTGACTCTGAGACATGGAGATGCACTCAAACACTGGAGCTCGTGAGT TCTCTGGAACATAGGTTTGAGGAAGCATTTTTCAACCAAGTAGCAGTGTTGCCACAAGCT AGCCTTATTTTGCTTGCAAATGCCAAAAAGAATGCTATTTATGCTGTGCATGTTGAATAT GGCCCAGATCCTGCTTCTACTAGATTGGACTATATAGCGGATTTTACAGTTGCAATGCCT ATTCTAAGTCTGACAGGAACACACGAAAGCCAACTGGATACTGAACAGATAGTTCAAGTG TATTGTGTCCAGACAATGGCTATCCAGCAGTATGGATTGGAATTATCTCTTTGTTTGCCT CCTACAGCTGATAATCCTGGGTTTGGTAGAGATCCAGCTATTTCTCATGTGTATGAGAGA CCTCCAGCAGAAGTAACTGTGGTGGAGTCATCCAAGGAAACTAGTCTGATTGATTCCTCT GTTGTTGGTCCAACTAAACCAGCAAGCAATAATCAGGCCCTAGAAGCGAATGTCCCTTCG CAAGTTCAATCCACAACTCCTCCATCAAGCATTGACCTTGGATATTTAGAAGAAGGTGCC TTGAGAAGAGGTCCTTCAAGAGGTCCATCTCTTGGTGATCGTGATATAGACCCGTCATCT CTTGATTATTCAAGTAAGAAAAGGATGGATTCTGATGGTGCAAGTGGGCAAGGTTCATTT GGTAGGAAGGATAGTTTCGGAAAGGAAGAGCCAAGAGGCAGCCAGGGTGATGGTGTCCTT TCGTCTCCAGAAACAATTGCTACTGGCAGTTCTCAAAATGTAGAAGTGGATGCTAAACAT GTGGATGGGAGAAAATCAGAGCGAAGTGTTGAACTTGAAGCTGTCAAGGAGACACAAATT GTTCATGAGAAAAGGGAGAGACCTCCCAAGACTGCTGAACAAACTGTAAACACAATCAGT GAACGCTTGGTAACAACTGACAAATACAGTGTGGAAGATTCACAATCTCGGAGTGCTGAT GGATCAGTATCTACACTTTTGAAACATCCTTCTGGTGCTGGGGATGAAAACACTGTAAGT GAAGCTCCAGAGAAAACTAGTGATGGTTATGCTTCTAGGAACTTGCAGTTAACCTTGGCT ACCAAGGAGGAGAAAGTTCTTCATCCTCAAGTTTCTAGGCAGTTATCTCCTTCTACAAGC ACTTACAACTCTGCTGATTCCTCTCATGAACCTCCAAGCAACGTAAACCCTCCTATTGAT AACGTTCCACAAGTTGGTATTCAAGAAACACTACAACAGCTAATGGCCATGCATAGTGAC CTGCAAAAGCAGCTGAGCACAATTGTATCTGCTCCTATTGCAAAGGAAGGCAAAAGGATC GAGACATCTTTAGGTCGTAACATGGAAAAGTCCATTAAGGCGAACATTGATGCCATGTGG GCCCGTTTCCAGGAGGAAAATGCAAAGCATGAAAAGGCTGAAAGAGAGCGTATGCAGCAT ATCACTACTCTCATCACAACTGCTGTAAACAAGGATATTCCTGTTATGCTGGAGAAGTCC CTAAAGAAAGAAATATCTTCAGTTGGACCTGCTGTTGCACGGACAACAGCTCCTATCATT GAGAAATCACTATCTTCTGCTGTTTCTGATTCACTCCAGAAAGTTCTTGGTGACAAGGTT GTGAATCAACTGGACAAATCCCTAAGTACAAAACTTGAAGCTACAGTAGCTAGGCAGATC CAAACGCAGTTTCATACGTCTGCCAAGCAGGCCCTTCAGGATGCTTTGCGCTCTAGCTTT GAGTCAACAATCATTCCAGCATTTGAACAATCTTGCAAGACAATGTTTGAGCAAGTAGAT GGTGCATTCCAGAAAGGCATGTCTGAGCATGGTGCTGCTATCCGTCAGCAGGTTGCAACA GCACATACTCCACTAGCACAAACTCTCAGGGAAACAATCGCTTCAGCATCATCGATAAAC CAGGGTCTTGCATCAGAGTTGCTTGATGGACAGCGTAAGCTTTTGGCACTTGTTTCATCG GGGGGCTCCTTATCGCATAATACAAGTGTTCTGCAGCCTAGTAATGGACCAGTGGCTAGT CTCCCTGAGGTCGATGCTCCACTGGATCCTGTTAAGGAGCTAAGCAGACTGATATCTGAG CGCAAATTTGATGAAGCATTTACAATGGCTCTTCAAAGAAGTGATGTCTCCATAGTGTCT TGGCTGTGCTCTCAGGTCGATCTGCACGAGTTATGCAGAATGAACCCCATTCCTCTCAAC CAAGGGGTCCTGTTGGCCCTTTTCCAGCAACTAGCATGTGACATCGTCAATGACACGCCC AGAAAGCTTGAGTGGATGACGGCTGTTGCTGTTGCAATCAGTCCAACAGATCCTATGATC GCTGTGCATGTGAGGCCGATATTCGAGCAGGTCTATGGCGTTTTGAACCACCAACGGTCA CTGCCAGCAAGCAGTTCCTCGGAAGCGACCAACATCCGTTTGATCATGCACGTAATCAAC TCGGTGCTGCTGACCTACAAGTGA

Peptide Sequence

PEP ID	Os06t0300800-02
PEP Infomation	pep chromosome:IRGSP-1.0:6:11220341:11228544:1 gene:Os06g0300800 transcript:Os06t0300800-02 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:OsWD40-128 description:Hypothetical conserved gene. (Os06t0300800-01);WD40 repeat-like domain containing protein. (Os06t0300800-02)
Sequence	MQLLGNTAPTHLESAVSMPMPSEFSAAAAVAPPAPLPAMPSAPPARMPSSSSSKMPRGRL LGPGDRAVHDVDSRLPGEAQPPQLEVTPITKYTSDPGLVLGRQIAVNRTYIVYGLKLGNI RVLNINTALRSLLRGHTQRVTDMAFFAEDVHRLASASVDGRIYVWKIDEGPDEQNKPQIT GKIEIAIQIVGDAETYHPRICWHSHKQEILFVGVANCVLKIDTTKVGRGMDFSREEPLKC PLDKLVDGVHLVGKHDADITDLSLSQWMTTRLASASKDGMVKIWDDRKSVPLSVLKPHDG QAVYSVSFLTAPEHPQHINLITAGPLNREVKIWASTNDEGWLLPSDSETWRCTQTLELVS SLEHRFEEAFFNQVAVLPQASLILLANAKKNAIYAVHVEYGPDPASTRLDYIADFTVAMP ILSLTGTHESQLDTEQIVQVYCVQTMAIQQYGLELSLCLPPTADNPGFGRDPAISHVYER PPAEVTVVESSKETSLIDSSVVGPTKPASNNQALEANVPSQVQSTTPPSSIDLGYLEEGA LRRGPSRGPSLGDRDIDPSSLDYSSKKRMDSDGASGQGSFGRKDSFGKEEPRGSQGDGVL SSPETIATGSSQNVEVDAKHVDGRKSERSVELEAVKETQIVHEKRERPPKTAEQTVNTIS ERLVTTDKYSVEDSQSRSADGSVSTLLKHPSGAGDENTVSEAPEKTSDGYASRNLQLTLA TKEEKVLHPQVSRQLSPSTSTYNSADSSHEPPSNVNPPIDNVPQVGIQETLQQLMAMHSD LQKQLSTIVSAPIAKEGKRIETSLGRNMEKSIKANIDAMWARFQEENAKHEKAERERMQH ITTLITTAVNKDIPVMLEKSLKKEISSVGPAVARTTAPIIEKSLSSAVSDSLQKVLGDKV VNQLDKSLSTKLEATVARQIQTQFHTSAKQALQDALRSSFESTIIPAFEQSCKTMFEQVD GAFQKGMSEHGAAIRQQVATAHTPLAQTLRETIASASSINQGLASELLDGQRKLLALVSS GGSLSHNTSVLQPSNGPVASLPEVDAPLDPVKELSRLISERKFDEAFTMALQRSDVSIVS WLCSQVDLHELCRMNPIPLNQGVLLALFQQLACDIVNDTPRKLEWMTAVAVAISPTDPMI AVHVRPIFEQVYGVLNHQRSLPASSSSEATNIRLIMHVINSVLLTYK

Transcript Sequence

Transcript ID	Os06t0300800-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:6:11220341:11228544:1 gene:Os06g0300800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:OsWD40-128 description:Hypothetical conserved gene. (Os06t0300800-01);WD40 repeat-like domain containing protein. (Os06t0300800-02)
Sequence	GGGAACCCTAACCCCCCCGCCGCCGCCGCTGCTCCCAACCCGGCGGGCGCCAGGCTCATG CAGCTGCTCGGGAACACGGCGCCCACGCACCTCGAGTCGGCGGTGTCCATGCCGATGCCG TCGGAGTTCTCCGCCGCCGCGGCTGTGGCGCCGCCCGCGCCGCTGCCCGCGATGCCGTCC GCGCCGCCCGCGAGGATGCCGAGCAGCAGCAGCAGCAAGATGCCGAGGGGGAGGCTCCTG GGGCCAGGGGACCGGGCCGTGCACGACGTGGACTCGCGGCTGCCAGGCGAGGCGCAGCCG CCTCAGCTGGAGGTGACGCCCATCACCAAGTACACGTCGGACCCGGGGCTGGTGCTCGGC AGGCAGATCGCCGTGAACCGGACCTACATCGTGTATGGCCTCAAGCTCGGCAACATCCGC GTGCTCAACATCAACACCGCGCTTCGCTCGCTCCTCCGCGGGCACACACAGAGGGTTACG GACATGGCTTTCTTTGCGGAAGATGTCCATCGGTTAGCAAGTGCAAGTGTAGATGGGCGG ATCTATGTATGGAAGATTGACGAGGGACCTGATGAGCAGAATAAACCACAAATCACAGGA AAGATTGAAATTGCCATACAGATTGTAGGAGATGCTGAAACTTACCATCCAAGAATATGT TGGCACTCCCATAAGCAAGAGATTCTGTTTGTTGGAGTTGCTAACTGCGTCTTAAAAATA GACACAACAAAAGTAGGAAGAGGAATGGACTTCAGTAGAGAAGAACCTCTTAAATGCCCA CTCGACAAGCTGGTCGATGGCGTTCACTTGGTTGGTAAACATGATGCAGATATTACAGAT TTGTCCCTATCTCAATGGATGACTACTCGTCTTGCTTCCGCATCAAAAGATGGCATGGTA AAGATCTGGGATGATCGCAAATCTGTGCCTCTGTCTGTTCTGAAACCACATGATGGTCAA GCTGTTTACTCTGTTTCTTTCCTTACGGCACCTGAGCATCCCCAGCATATAAATCTCATC ACAGCAGGCCCTCTCAATCGAGAAGTAAAAATTTGGGCTTCCACTAATGATGAAGGTTGG TTGTTGCCAAGTGACTCTGAGACATGGAGATGCACTCAAACACTGGAGCTCGTGAGTTCT CTGGAACATAGGTTTGAGGAAGCATTTTTCAACCAAGTAGCAGTGTTGCCACAAGCTAGC CTTATTTTGCTTGCAAATGCCAAAAAGAATGCTATTTATGCTGTGCATGTTGAATATGGC CCAGATCCTGCTTCTACTAGATTGGACTATATAGCGGATTTTACAGTTGCAATGCCTATT CTAAGTCTGACAGGAACACACGAAAGCCAACTGGATACTGAACAGATAGTTCAAGTGTAT TGTGTCCAGACAATGGCTATCCAGCAGTATGGATTGGAATTATCTCTTTGTTTGCCTCCT ACAGCTGATAATCCTGGGTTTGGTAGAGATCCAGCTATTTCTCATGTGTATGAGAGACCT CCAGCAGAAGTAACTGTGGTGGAGTCATCCAAGGAAACTAGTCTGATTGATTCCTCTGTT GTTGGTCCAACTAAACCAGCAAGCAATAATCAGGCCCTAGAAGCGAATGTCCCTTCGCAA GTTCAATCCACAACTCCTCCATCAAGCATTGACCTTGGATATTTAGAAGAAGGTGCCTTG AGAAGAGGTCCTTCAAGAGGTCCATCTCTTGGTGATCGTGATATAGACCCGTCATCTCTT GATTATTCAAGTAAGAAAAGGATGGATTCTGATGGTGCAAGTGGGCAAGGTTCATTTGGT AGGAAGGATAGTTTCGGAAAGGAAGAGCCAAGAGGCAGCCAGGGTGATGGTGTCCTTTCG TCTCCAGAAACAATTGCTACTGGCAGTTCTCAAAATGTAGAAGTGGATGCTAAACATGTG GATGGGAGAAAATCAGAGCGAAGTGTTGAACTTGAAGCTGTCAAGGAGACACAAATTGTT CATGAGAAAAGGGAGAGACCTCCCAAGACTGCTGAACAAACTGTAAACACAATCAGTGAA CGCTTGGTAACAACTGACAAATACAGTGTGGAAGATTCACAATCTCGGAGTGCTGATGGA TCAGTATCTACACTTTTGAAACATCCTTCTGGTGCTGGGGATGAAAACACTGTAAGTGAA GCTCCAGAGAAAACTAGTGATGGTTATGCTTCTAGGAACTTGCAGTTAACCTTGGCTACC AAGGAGGAGAAAGTTCTTCATCCTCAAGTTTCTAGGCAGTTATCTCCTTCTACAAGCACT TACAACTCTGCTGATTCCTCTCATGAACCTCCAAGCAACGTAAACCCTCCTATTGATAAC GTTCCACAAGTTGGTATTCAAGAAACACTACAACAGCTAATGGCCATGCATAGTGACCTG CAAAAGCAGCTGAGCACAATTGTATCTGCTCCTATTGCAAAGGAAGGCAAAAGGATCGAG ACATCTTTAGGTCGTAACATGGAAAAGTCCATTAAGGCGAACATTGATGCCATGTGGGCC CGTTTCCAGGAGGAAAATGCAAAGCATGAAAAGGCTGAAAGAGAGCGTATGCAGCATATC ACTACTCTCATCACAACTGCTGTAAACAAGGATATTCCTGTTATGCTGGAGAAGTCCCTA AAGAAAGAAATATCTTCAGTTGGACCTGCTGTTGCACGGACAACAGCTCCTATCATTGAG AAATCACTATCTTCTGCTGTTTCTGATTCACTCCAGAAAGTTCTTGGTGACAAGGTTGTG AATCAACTGGACAAATCCCTAAGTACAAAACTTGAAGCTACAGTAGCTAGGCAGATCCAA ACGCAGTTTCATACGTCTGCCAAGCAGGCCCTTCAGGATGCTTTGCGCTCTAGCTTTGAG TCAACAATCATTCCAGCATTTGAACAATCTTGCAAGACAATGTTTGAGCAAGTAGATGGT GCATTCCAGAAAGGCATGTCTGAGCATGGTGCTGCTATCCGTCAGCAGGTTGCAACAGCA CATACTCCACTAGCACAAACTCTCAGGGAAACAATCGCTTCAGCATCATCGATAAACCAG GGTCTTGCATCAGAGTTGCTTGATGGACAGCGTAAGCTTTTGGCACTTGTTTCATCGGGG GGCTCCTTATCGCATAATACAAGTGTTCTGCAGCCTAGTAATGGACCAGTGGCTAGTCTC CCTGAGGTCGATGCTCCACTGGATCCTGTTAAGGAGCTAAGCAGACTGATATCTGAGCGC AAATTTGATGAAGCATTTACAATGGCTCTTCAAAGAAGTGATGTCTCCATAGTGTCTTGG CTGTGCTCTCAGGTCGATCTGCACGAGTTATGCAGAATGAACCCCATTCCTCTCAACCAA GGGGTCCTGTTGGCCCTTTTCCAGCAACTAGCATGTGACATCGTCAATGACACGCCCAGA AAGCTTGAGTGGATGACGGCTGTTGCTGTTGCAATCAGTCCAACAGATCCTATGATCGCT GTGCATGTGAGGCCGATATTCGAGCAGGTCTATGGCGTTTTGAACCACCAACGGTCACTG CCAGCAAGCAGTTCCTCGGAAGCGACCAACATCCGTTTGATCATGCACGTAATCAACTCG GTGCTGCTGACCTACAAGTGATAACCATCTTCAGTAGCGTGCTCTCTCAGTAGCTGCTGT AAGTTTGGGCAACATTCTTGCAATCCCTGTACAGATAAAATTTTGAAAAGCGAAGTAAAC CGATAAAAGTTGTGGTGATGGTGGTGATACATTGTGGCTGACAAGCCAAGGACCACTAGT CATTAGCATGGTGGGCATCTGGTGTAAATTGGTCCGTTGTGTTCCAGCCCGTTCTGAGCT GACATTTTTCATGTGGGTCTGTCATCTTGAACATGTTATTCAGCGCATGCAGAATATAGC TCTGTACTGTTAACCTCTGTTGAGTTGCTAGTTTAAACCGTGATTTTAGTTCCT