Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os06t0300600-01
CDS Infomation

cds chromosome:IRGSP-1.0:6:11204807:11208076:-1 gene:Os06g0300600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Decoy. (Os06t0300600-01)
Sequence

ATGCTGCTGCGATCGCCGGCGAGGTCGAGCCCCCACCTCCGCTCGCTCCTGCGGGCGCGA
GGCTTCATCTCCTCCGCCTCGCCCTCGGCCGCCACCGCGGCGGAAGGGGACGACGGGAAG
ATCGTGGCGTCCGTGCTGTTCGAGCGCCTCCCCGTCGTCATCCCCAAGATCCACCCCGTC
GTCTACGCCTTCCAAGAATTCTCGTTTCGGTGGAGGCAGCAGTACAGACGGAAGTACCCC
GACGACGTGCTGGGAAAGGCCGACGCGAGGGGCAAGGGAGATTATCAGATAGATTATGTG
CCTGCTCCAAGAATCACAGACGCTGACAAAACAAACGACAGGAAGTCACTACAACGAGCT
CTTGATAATAGACTCTATCTCCTTCTGTATGGCAAGGCTTATGGGGCTCCTGATGACAAG
CCTGTTTGGCATTTTCCAGAAAAAGTTTATGACAATGAAGACACTTTGCGATTGTGTGCT
GAATCAGCATTAAAATCTGTTCTTGGTGGACTCAACAATACGTATTTTGTTGGCAACGCG
CCAATGGCTCATATGGTAGTTGACCAGAAGGAAGATTCAAGCATTTCATCATTCAAGCGA
TTCTTCTTTAAGTCACAAGTGGTCGGTGCCACGAAATATGATATCGGAAAATGCCAGGAC
CACGTGTGGGTGACCAAAGATGAGTTACTGGAGTATTTTCCGGAGCACAAGGCTTTCTTC
AACAAGATGATCATTCACATAAGATAG

Peptide Sequence

PEP ID

Os06t0300600-01
PEP Infomation

pep chromosome:IRGSP-1.0:6:11204807:11208076:-1 gene:Os06g0300600 transcript:Os06t0300600-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Decoy. (Os06t0300600-01)
Sequence

MLLRSPARSSPHLRSLLRARGFISSASPSAATAAEGDDGKIVASVLFERLPVVIPKIHPV
VYAFQEFSFRWRQQYRRKYPDDVLGKADARGKGDYQIDYVPAPRITDADKTNDRKSLQRA
LDNRLYLLLYGKAYGAPDDKPVWHFPEKVYDNEDTLRLCAESALKSVLGGLNNTYFVGNA
PMAHMVVDQKEDSSISSFKRFFFKSQVVGATKYDIGKCQDHVWVTKDELLEYFPEHKAFF
NKMIIHIR

Transcript Sequence

Transcript ID

Os06t0300600-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:6:11204807:11208076:-1 gene:Os06g0300600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Decoy. (Os06t0300600-01)
Sequence

ACACGCACCACCCCCCCTTGCGGCGGCGCCTCCCCTCCCCTCCCCCTCTCACTCCGGCAC
CATGCTGCTGCGATCGCCGGCGAGGTCGAGCCCCCACCTCCGCTCGCTCCTGCGGGCGCG
AGGCTTCATCTCCTCCGCCTCGCCCTCGGCCGCCACCGCGGCGGAAGGGGACGACGGGAA
GATCGTGGCGTCCGTGCTGTTCGAGCGCCTCCCCGTCGTCATCCCCAAGATCCACCCCGT
CGTCTACGCCTTCCAAGAATTCTCGTTTCGGTGGAGGCAGCAGTACAGACGGAAGTACCC
CGACGACGTGCTGGGAAAGGCCGACGCGAGGGGCAAGGGAGATTATCAGATAGATTATGT
GCCTGCTCCAAGAATCACAGACGCTGACAAAACAAACGACAGGAAGTCACTACAACGAGC
TCTTGATAATAGACTCTATCTCCTTCTGTATGGCAAGGCTTATGGGGCTCCTGATGACAA
GCCTGTTTGGCATTTTCCAGAAAAAGTTTATGACAATGAAGACACTTTGCGATTGTGTGC
TGAATCAGCATTAAAATCTGTTCTTGGTGGACTCAACAATACGTATTTTGTTGGCAACGC
GCCAATGGCTCATATGGTAGTTGACCAGAAGGAAGATTCAAGCATTTCATCATTCAAGCG
ATTCTTCTTTAAGTCACAAGTGGTCGGTGCCACGAAATATGATATCGGAAAATGCCAGGA
CCACGTGTGGGTGACCAAAGATGAGTTACTGGAGTATTTTCCGGAGCACAAGGCTTTCTT
CAACAAGATGATCATTCACATAAGATAGCCCTTTTATCTGATTGGGGCAAGCTGGGACAC
TCTGAAGTTTGAACAATGAGCATTGTGTTGCTTGACCTGTGTACAAGTTTCCTGCCACCA
CTTATCATCCTGAACACAATTGGCAAGGAAAATTACTCATCAAGTGTTCCTCCAAAGACA
CCCACATAGATGTATTGCCCATTTTTGTCAATCATATGGCAATCCTGTAGCCTTGTAGGC
TTTTTTCCCAGCTGCTGTATTTTTAACATGATGTACTACCGTTCTATTATTCTTGGTGAA
ATAATTAACATGGCATTTTGGCCCCTCCTTCCTTTGTTGGGGTTTCT