Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os06t0300500-01
CDS Infomation	cds chromosome:IRGSP-1.0:6:11200132:11203938:-1 gene:Os06g0300500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Steroid nuclear receptor, ligand-binding domain containing protein. (Os06t0300500-01)
Sequence	TCTTCTGATTGTTTTTTAATTTTTTTTTGTGCAGCTGTGCTAATTGGTCCAATTGCTGCC GCCATCATCTTTTTGGGGAATTCTGCTGTTATTATCGGCCTGTGGCCTGCTCATTTCATA TGGACATACTACTGTGTTCTGAAAGCGGAGCGTATTGGACTAGTTTTGAAGATCCTTGCT GCGATACTGCTGCCATTGCCTTTGCTCCTGTTGCCAGTACTTGCTATTTCTGGGAGCCTT CTGGGTGGTATAGGATATGGAGTTTTCATTCCACTAATGGCAACTTTCGAGGCTGTGGGT GAGGGTGTCGCGGACAAGCTCACCCATTGTTTTTTGGATGGCACGGTCAGTACAACAGCC GGAGCTTGCACGGTGGTGCGTGATGCTACCGATTTCTGCTTCCACTCATACTTCTCTCTT ATGGATGAGCTCATAAGAAAATTGGGAGATAATGAAACTCCTCTTGACATCAAACTGTCT TATCTACCACACAGCATGCTTGCTGTTCTTATTGCTGTTCCTTTCGACGTATTCATGATA AGTGGAGTGGCATTGTGGAAAAGCCCCTGCATGTTGTTGAAAGGATGGCAAAGGCTGTGC GAGGACTTGGTTGGAAGGGAAGGACCGTTTCTAGAAACAGTCTGTGTTCCTTTCGCTGGT TTGTCTATCATATTATGGCCACTTGCTGTAATTGGGGCAGTAGTTGCTTCATTTCTTAGC AGCTTCTTTTTTGGTATGCGTGCTGGATTAATTGCTTATCAGGAGGCTTCTCTCCAAATG GGACTAGCATATATGGTTTCAGCAGTAGCATTGTTCGACGAATACACAAATGATATGCTT TACTTAAGAGAAGGCTCATGTTTTCCAAGGCCCAAGTACCGAAAAACCGATAGGATGAAT AACGAGACTGGTCAGAACAATGAAGTGCGCAATGCTACATCTCCATTGGGAGAAAAGAAA CACCACCATAAAACCATGAAGGCTTTGCAGCGATCAAAGACATTTATGGAAGCTATCCAG CGGCTTAGACCAATTCAAATATGGGATTGGCTCTTCCGATCTTGTGAGCTGAATGGAAGG ATATTACTGGGTGAGGGATTGATTAGTGCTGAGGACATGGAAGAATGTATCATCAAAGGA AAATGCAAGAAATTAAGCATAAAGTTGCCTGCCTGGTGCATCCTTCAATGCCTGATACGA TCTGCAAAACATGATTCGCATGGTTTGCTCATATCTGACGATGTTGAAGTGACAAACTTC AACTGGCCTAAAGACAAAGTGTTTGACTGGATGCTTGGACCACTTCTTGTTATTAAGGAG CAAATGAAGCAATTAGAGCTAACTGAAGATGAGGAACTATGCTTAAGGAGGCTCATCATG ACAAATAACAATGATAAACCATCTGACTGGGACGATTGTGGTTTCCCGTCAAGCGATAAT ATAAGGAGAGCTCGGCTGCAAGCGATAATCAGAAGGTTGCAAGGCATTGTTGTCAATTTG TCGTGGGTACCGAGCTTCAGGAGACGATTCATCGATCTGGTTAAGGCATTGTATCTCGAG GCGGTCGAGGCAGGCGCGATCGACGGCTCAAGGAGCGTGAAGCGCAAAATCGAGGCTGAT GCTGCTTCTGCTCCTGGAAGCAAGTTTGATGACAAAGATGGGGAGGGCTCATCAAAGGGC GCAGCAGCAGTGGGCATTGATGCAGTGTGA

Peptide Sequence

PEP ID	Os06t0300500-01
PEP Infomation	pep chromosome:IRGSP-1.0:6:11200132:11203938:-1 gene:Os06g0300500 transcript:Os06t0300500-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Steroid nuclear receptor, ligand-binding domain containing protein. (Os06t0300500-01)
Sequence	SSDCFLIFFCAAVLIGPIAAAIIFLGNSAVIIGLWPAHFIWTYYCVLKAERIGLVLKILA AILLPLPLLLLPVLAISGSLLGGIGYGVFIPLMATFEAVGEGVADKLTHCFLDGTVSTTA GACTVVRDATDFCFHSYFSLMDELIRKLGDNETPLDIKLSYLPHSMLAVLIAVPFDVFMI SGVALWKSPCMLLKGWQRLCEDLVGREGPFLETVCVPFAGLSIILWPLAVIGAVVASFLS SFFFGMRAGLIAYQEASLQMGLAYMVSAVALFDEYTNDMLYLREGSCFPRPKYRKTDRMN NETGQNNEVRNATSPLGEKKHHHKTMKALQRSKTFMEAIQRLRPIQIWDWLFRSCELNGR ILLGEGLISAEDMEECIIKGKCKKLSIKLPAWCILQCLIRSAKHDSHGLLISDDVEVTNF NWPKDKVFDWMLGPLLVIKEQMKQLELTEDEELCLRRLIMTNNNDKPSDWDDCGFPSSDN IRRARLQAIIRRLQGIVVNLSWVPSFRRRFIDLVKALYLEAVEAGAIDGSRSVKRKIEAD AASAPGSKFDDKDGEGSSKGAAAVGIDAV

Transcript Sequence

Transcript ID	Os06t0300500-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:6:11200132:11203938:-1 gene:Os06g0300500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Steroid nuclear receptor, ligand-binding domain containing protein. (Os06t0300500-01)
Sequence	AAAAAAAAAAAACACACTCACATCGACAATTTTGCTGCTGGTTATTTTTGTTGTAGTAGT ATTTTGCTCGGTGGCTATTGTTTTGTAGCAAGCAGGAGTTGTTCAGCCCTCAGATGGTGT GGAATGGATGGAATCTGAAATGATCTTCTGATTGTTTTTTAATTTTTTTTTGTGCAGCTG TGCTAATTGGTCCAATTGCTGCCGCCATCATCTTTTTGGGGAATTCTGCTGTTATTATCG GCCTGTGGCCTGCTCATTTCATATGGACATACTACTGTGTTCTGAAAGCGGAGCGTATTG GACTAGTTTTGAAGATCCTTGCTGCGATACTGCTGCCATTGCCTTTGCTCCTGTTGCCAG TACTTGCTATTTCTGGGAGCCTTCTGGGTGGTATAGGATATGGAGTTTTCATTCCACTAA TGGCAACTTTCGAGGCTGTGGGTGAGGGTGTCGCGGACAAGCTCACCCATTGTTTTTTGG ATGGCACGGTCAGTACAACAGCCGGAGCTTGCACGGTGGTGCGTGATGCTACCGATTTCT GCTTCCACTCATACTTCTCTCTTATGGATGAGCTCATAAGAAAATTGGGAGATAATGAAA CTCCTCTTGACATCAAACTGTCTTATCTACCACACAGCATGCTTGCTGTTCTTATTGCTG TTCCTTTCGACGTATTCATGATAAGTGGAGTGGCATTGTGGAAAAGCCCCTGCATGTTGT TGAAAGGATGGCAAAGGCTGTGCGAGGACTTGGTTGGAAGGGAAGGACCGTTTCTAGAAA CAGTCTGTGTTCCTTTCGCTGGTTTGTCTATCATATTATGGCCACTTGCTGTAATTGGGG CAGTAGTTGCTTCATTTCTTAGCAGCTTCTTTTTTGGTATGCGTGCTGGATTAATTGCTT ATCAGGAGGCTTCTCTCCAAATGGGACTAGCATATATGGTTTCAGCAGTAGCATTGTTCG ACGAATACACAAATGATATGCTTTACTTAAGAGAAGGCTCATGTTTTCCAAGGCCCAAGT ACCGAAAAACCGATAGGATGAATAACGAGACTGGTCAGAACAATGAAGTGCGCAATGCTA CATCTCCATTGGGAGAAAAGAAACACCACCATAAAACCATGAAGGCTTTGCAGCGATCAA AGACATTTATGGAAGCTATCCAGCGGCTTAGACCAATTCAAATATGGGATTGGCTCTTCC GATCTTGTGAGCTGAATGGAAGGATATTACTGGGTGAGGGATTGATTAGTGCTGAGGACA TGGAAGAATGTATCATCAAAGGAAAATGCAAGAAATTAAGCATAAAGTTGCCTGCCTGGT GCATCCTTCAATGCCTGATACGATCTGCAAAACATGATTCGCATGGTTTGCTCATATCTG ACGATGTTGAAGTGACAAACTTCAACTGGCCTAAAGACAAAGTGTTTGACTGGATGCTTG GACCACTTCTTGTTATTAAGGAGCAAATGAAGCAATTAGAGCTAACTGAAGATGAGGAAC TATGCTTAAGGAGGCTCATCATGACAAATAACAATGATAAACCATCTGACTGGGACGATT GTGGTTTCCCGTCAAGCGATAATATAAGGAGAGCTCGGCTGCAAGCGATAATCAGAAGGT TGCAAGGCATTGTTGTCAATTTGTCGTGGGTACCGAGCTTCAGGAGACGATTCATCGATC TGGTTAAGGCATTGTATCTCGAGGCGGTCGAGGCAGGCGCGATCGACGGCTCAAGGAGCG TGAAGCGCAAAATCGAGGCTGATGCTGCTTCTGCTCCTGGAAGCAAGTTTGATGACAAAG ATGGGGAGGGCTCATCAAAGGGCGCAGCAGCAGTGGGCATTGATGCAGTGTGATATCTAC TGTTTGTGTACACGAAATTTACCTGGCTTCCATCATGCATTCTGCTGGGCCTTTTTTTTT TCTGGTAACTGCCTATGCATGTTAATGTACTGGAGACATCCTGTAACTCTGTAAGAGATG GCAGAAAAGGGTCCTATTTGGCTGTATGGCACCTCCAAGTCTCCAACTTCAAATCTAACT TCAAAACATTTTGGAGTTGGATCTGGGATTAGGTTAGGTGCTAATGTGAGACTTTCTGTT CATACTTTGTATTAAGATTAGATTATTAATTCACTTTAATTTATTTT