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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os06t0300300-01
CDS Infomation

cds chromosome:IRGSP-1.0:6:11184920:11189423:-1 gene:Os06g0300300 gene_biotype:protein_coding transcript_biotype:protein_coding description:SFT2-like family protein. (Os06t0300300-01)
Sequence

ATGCACAAGACGGCGCAGGCCTGGTTCACCGGCGGCCCCGCCGCCCCCGCCGCCTCCGCC
GGCGAGTCGCAGCCGTCCCTCCTCGCCGACTGGAACTCCTACGCCGCCTCCCGCCCCGAC
GCCTCCTCCTCCTCCCCTCTCCCTTTCGACATCGAGGCCGCCGTCCGCTCCGCCAACGAC
ACCGTCTCCGGCACCTTCAGCGTGGTGACCAAGGGCGTGCGGGAGCTGCCGGGGAGCTTC
CAGAGCGCGACGAGCAGCTTCCCGTCGGGGAAGGCGCTCATGTACTTCGGACTCTTCCTC
GCCACCGGCATCTTCTTCGTCTTCATCGCGTTCGCGCTCTTCCTCCCCGTCATGGTGATC
ATGCCGCAGAAGTTCGCCATCTGCTTCACGCTCGGCTGCGGGCTCATCATCGCATCCATC
TTCGCGCTCAAAGGACCCGCCAGCCAGTTCGCCCACATGACCTCCATGGAGAGGCTACCA
TTTACAGGGGCACTTATTGGATGCATGGTTGGTACCATTTATGTGTCAATGTTTCTTCAC
AGCTATTTCCTCTCAGTGATATTCTCTGTCCTTCAGGTTCTATCTCTTGCTTACTACACC
ATATCCTACTTTCCTGGGGGTTCCAGTGGATTGAAATTTATCTCCTCGAGTCTCTTGTCA
TCAGTAACGAGCTGTTTTGGCCGGTAA

Peptide Sequence

PEP ID

Os06t0300300-01
PEP Infomation

pep chromosome:IRGSP-1.0:6:11184920:11189423:-1 gene:Os06g0300300 transcript:Os06t0300300-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:SFT2-like family protein. (Os06t0300300-01)
Sequence

MHKTAQAWFTGGPAAPAASAGESQPSLLADWNSYAASRPDASSSSPLPFDIEAAVRSAND
TVSGTFSVVTKGVRELPGSFQSATSSFPSGKALMYFGLFLATGIFFVFIAFALFLPVMVI
MPQKFAICFTLGCGLIIASIFALKGPASQFAHMTSMERLPFTGALIGCMVGTIYVSMFLH
SYFLSVIFSVLQVLSLAYYTISYFPGGSSGLKFISSSLLSSVTSCFGR

Transcript Sequence

Transcript ID

Os06t0300300-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:6:11184920:11189423:-1 gene:Os06g0300300 gene_biotype:protein_coding transcript_biotype:protein_coding description:SFT2-like family protein. (Os06t0300300-01)
Sequence

GTTTTCATCTTCTTCTTGTTCTTGTACTAACTACTCCTAACTCCCACCACCTCCGCCTCC
GCGTCGCCCCGCCGCGCGCCTCCTCCCCGCCTCGCCGCCGGCGCGCACCTCCTCGCGGAT
CGCGATGCACAAGACGGCGCAGGCCTGGTTCACCGGCGGCCCCGCCGCCCCCGCCGCCTC
CGCCGGCGAGTCGCAGCCGTCCCTCCTCGCCGACTGGAACTCCTACGCCGCCTCCCGCCC
CGACGCCTCCTCCTCCTCCCCTCTCCCTTTCGACATCGAGGCCGCCGTCCGCTCCGCCAA
CGACACCGTCTCCGGCACCTTCAGCGTGGTGACCAAGGGCGTGCGGGAGCTGCCGGGGAG
CTTCCAGAGCGCGACGAGCAGCTTCCCGTCGGGGAAGGCGCTCATGTACTTCGGACTCTT
CCTCGCCACCGGCATCTTCTTCGTCTTCATCGCGTTCGCGCTCTTCCTCCCCGTCATGGT
GATCATGCCGCAGAAGTTCGCCATCTGCTTCACGCTCGGCTGCGGGCTCATCATCGCATC
CATCTTCGCGCTCAAAGGACCCGCCAGCCAGTTCGCCCACATGACCTCCATGGAGAGGCT
ACCATTTACAGGGGCACTTATTGGATGCATGGTTGGTACCATTTATGTGTCAATGTTTCT
TCACAGCTATTTCCTCTCAGTGATATTCTCTGTCCTTCAGGTTCTATCTCTTGCTTACTA
CACCATATCCTACTTTCCTGGGGGTTCCAGTGGATTGAAATTTATCTCCTCGAGTCTCTT
GTCATCAGTAACGAGCTGTTTTGGCCGGTAACCTGAGTAGGATGACAACTACTTGATCAT
ATATCCTTCATTTTTCTTGCAATATTTTTGTATGTAGCACTGATCAACGATAGAGAGATT
GTGACACCCCTCCTACTCATGCTTGTTGCTGTTTAGACTAAGATCAATACGGGGTGAAAA
GGTTTGTCGTACTTATGTATCTGAAGGTCATATTGTGGAAATAAAGCTGTCCTTTC