Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os06t0299100-01
CDS Infomation

cds chromosome:IRGSP-1.0:6:11116720:11118276:-1 gene:Os06g0299100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Glucose/ribitol dehydrogenase family protein. (Os06t0299100-01)
Sequence

ATGATGGCTAGCCATTTCTACGGCATGTTCCGGCAAGACGACCCAGCGCCGGCGCCGGCG
TGGTGGTTCCAGTCGCTGGCCTTCCTCGGCGCCGCCTACGTCGCCGGCGTCACGCTGCGC
CTCCTCGCCTACGTCGCGATCTGCCTCGGCGGGCCCAAGGACCTCCGCCGGTACGGCGCG
TGGGCCGTCATCACCGGGCCGACGTCCGGCATCGGCTGCGCCATGGCGCTGGAGCTCGCG
CGCCGCGGCCTCAACCTCGTGCTCGTCGGCCGTGACCCCGCCAGGCTCCGGGAGATCTCC
GGCACGATCCGCTCCCGCCACGGCCGGGTGCAGACCAAGGCCGTGGTGTTCGACCTGTCC
CTCGCCTCGACCCCGGACGGCGACCAGCCGCTGCGGCGGCTGCGGGAGGCCGTGGCGGGG
CTGGACGTCGGGGTGGTGGTGAACAACGCCAGCGAGGGGAGGCCCGGCGCGGTGTACCTC
CACGAGGCGGACGTGGAGGAGTGGGTGAGGATGGCGCGGGTGAACGTGTCGGCGGTGACA
GAGGTGACGGCGGCGGTGCTGCCCGGGATGGTGGAGCGGGGCAGGGGCGGCGCCGTCGTC
AACCTCGGCTCAGCGGCGTCGGAGGCCATCCCGTCCTTCCCCCTCTACACCATGTACGCC
TCCACCAAACGGTACGTGGCTCAGTTCTCCCGGAGCCTTCACGTCGAGTATGCGAACAAA
GGGATCCATGTGCAATGCCAGACGCCGTTCTTCGTGGAGACGACGATGTTGGCGAAGTTG
GAGGAGGAGGTGGGGCTTAGCGTGTCGCCGTTGAAGGTGAGCACGGACACCTACGCGCGC
GCGGCGGTGGCGTGGATCGGACGCGGCGGGCCGCTCTGCACGCCGGGTGGACTGCTGCAC
CAGCTGATGTGGTGCATCACCGCCGCCGTGCCGGAGTCCGTCCTCGACTGGATCGTCCTG
CGCTTCACCACCTGGAACAGAGGACGGTAG

Peptide Sequence

PEP ID

Os06t0299100-01
PEP Infomation

pep chromosome:IRGSP-1.0:6:11116720:11118276:-1 gene:Os06g0299100 transcript:Os06t0299100-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Glucose/ribitol dehydrogenase family protein. (Os06t0299100-01)
Sequence

MMASHFYGMFRQDDPAPAPAWWFQSLAFLGAAYVAGVTLRLLAYVAICLGGPKDLRRYGA
WAVITGPTSGIGCAMALELARRGLNLVLVGRDPARLREISGTIRSRHGRVQTKAVVFDLS
LASTPDGDQPLRRLREAVAGLDVGVVVNNASEGRPGAVYLHEADVEEWVRMARVNVSAVT
EVTAAVLPGMVERGRGGAVVNLGSAASEAIPSFPLYTMYASTKRYVAQFSRSLHVEYANK
GIHVQCQTPFFVETTMLAKLEEEVGLSVSPLKVSTDTYARAAVAWIGRGGPLCTPGGLLH
QLMWCITAAVPESVLDWIVLRFTTWNRGR

Transcript Sequence

Transcript ID

Os06t0299100-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:6:11116720:11118276:-1 gene:Os06g0299100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Glucose/ribitol dehydrogenase family protein. (Os06t0299100-01)
Sequence

GTGCAAATGACGCCGAAGAGAGCTGTGCATTGCGGTCGGATCAAATGATGGCTAGCCATT
TCTACGGCATGTTCCGGCAAGACGACCCAGCGCCGGCGCCGGCGTGGTGGTTCCAGTCGC
TGGCCTTCCTCGGCGCCGCCTACGTCGCCGGCGTCACGCTGCGCCTCCTCGCCTACGTCG
CGATCTGCCTCGGCGGGCCCAAGGACCTCCGCCGGTACGGCGCGTGGGCCGTCATCACCG
GGCCGACGTCCGGCATCGGCTGCGCCATGGCGCTGGAGCTCGCGCGCCGCGGCCTCAACC
TCGTGCTCGTCGGCCGTGACCCCGCCAGGCTCCGGGAGATCTCCGGCACGATCCGCTCCC
GCCACGGCCGGGTGCAGACCAAGGCCGTGGTGTTCGACCTGTCCCTCGCCTCGACCCCGG
ACGGCGACCAGCCGCTGCGGCGGCTGCGGGAGGCCGTGGCGGGGCTGGACGTCGGGGTGG
TGGTGAACAACGCCAGCGAGGGGAGGCCCGGCGCGGTGTACCTCCACGAGGCGGACGTGG
AGGAGTGGGTGAGGATGGCGCGGGTGAACGTGTCGGCGGTGACAGAGGTGACGGCGGCGG
TGCTGCCCGGGATGGTGGAGCGGGGCAGGGGCGGCGCCGTCGTCAACCTCGGCTCAGCGG
CGTCGGAGGCCATCCCGTCCTTCCCCCTCTACACCATGTACGCCTCCACCAAACGGTACG
TGGCTCAGTTCTCCCGGAGCCTTCACGTCGAGTATGCGAACAAAGGGATCCATGTGCAAT
GCCAGACGCCGTTCTTCGTGGAGACGACGATGTTGGCGAAGTTGGAGGAGGAGGTGGGGC
TTAGCGTGTCGCCGTTGAAGGTGAGCACGGACACCTACGCGCGCGCGGCGGTGGCGTGGA
TCGGACGCGGCGGGCCGCTCTGCACGCCGGGTGGACTGCTGCACCAGCTGATGTGGTGCA
TCACCGCCGCCGTGCCGGAGTCCGTCCTCGACTGGATCGTCCTGCGCTTCACCACCTGGA
ACAGAGGACGGTAGCTGTTGCAGCCAGCGGAGCAGAGTGTCAAGGACGAGGGGCATGCAA
GTTCAGAGAGCTGTGGTGGCTCGCTAAGTTACCATCCTGGCCGCTGTCGTTCGATTACCC
TAACGGCGATCAGCCGTACGTCGTGACCACAAGTCGCGCCCGATGTGTGTATCTCGAGCG
AGTCAGGGGTGGAGATTAGGTTTGTAAAAACTATGTCAAAATGTAATTTTACTTTCAAGT
ATTGATATGGAGTTATGGACAGTATGTAATCAACAACTTAATTAGCACTATTTAATCTAT
CGTGATAGATATGGAATTCAATGC