Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os06t0297800-01
CDS Infomation	cds chromosome:IRGSP-1.0:6:11046380:11054398:1 gene:Os06g0297800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to protein binding / zinc ion binding. (Os06t0297800-01);Similar to predicted protein. (Os06t0297800-02)
Sequence	TTTCTCCGAGTTCAACGACCACTTCCATGTTTCCAACCTGAACCACAAGCTGCAGTTAAA AAAGATAGGATAGGAGGAGCAATCTCCGGTTTCTTGATTTTTTTTTTTTTTGAACCGCGC CCAAATCGTGATTCTTGGAAGAAGAGGGGAAGGAGGGAAATGAGGCTGCTGGTGCAGGTG AGCGAGGCACGCAACCTGCCGGCGATCGACGGTGGCGGCGGGCTGAGCGACCCGTACGCG AAGCTGCAGCTGGGGAGGCAGCGTGGCAAGACCAGGGTGGCCAAGAGGACGCTGAGCCCG ACCTGGGACGAGGAGTTCGCGTTCCGGGTGGTGGACCTCAAGGACGAGCTCGTGGTGGTG GTCGTCGACGAGGACAGGTACTTCTCCGACGACTTCCTCGGCCAGGTCAGGGTGCCCCTC TCCGCCGTGCTCGACGCCGACAACCGCTCGCTCGGGACGCAGTGGTACCAGCTGCTGCCC AAGAGCAAGAAGTCCAAGATCAAGGATTACGGAGAAATTCGTCTTACAATATCTCTCTCT CTAAATTACCCTGAAGAGACAACGACACTTGCACATTGCGTTTCAGATGACCTCGCGTCA TATTCTGACAAATCAACTGAATTACAGAAAGGATCTTCTTTGCCAAATATTCCTATAGAA ATACCCACGTCAGTATCAGGGGGTGATGAAACAGAAATCATCAAGGAGGATAGATCAAAT GGTGTCCCATCATTTGTCAATCGTCTGTATCAATTTTTCTCAGCGAAACCAAAAGATGCA GAAGCTTCAGCTTCAGCTCCACCTCTCACTACGGGCGATGGTAATTCAGATATTCTTGAA GAAACACCATCAACTAGTTCAGAACTTCCTGATAACCAGGATTATGAAACTGGTGTAACT ATGTCCTTTGATGAACAACTAAAAGCCTTTGGATCTTGCCATGAAGGGAATGAAATACCT GAAAACTTGTCAGGTGGAGTTCTTATTGATCAAGTTTATGCTGTTGCACCCAGTGACTTG AATGGACTTCTTTTCTCACCAAGTTCAGATTTCTTGCAATCACTAGCGGAGATGCAAGGA ACTACTGGTCTTGAAATCCAACAATGGAGACTTGAAAATGATGGTGAGGTCTTGAAGAGG GTAGTAAGCTACACAAAAGCTCCTACTGCACTAGTCAAGGCTGTGAAAGCAACAGAGGAT GTGTCATATCTGAAGGCAGATGGAGATATATATGCAACTTTAGCTGATGTTAGTACTCCA GATGTTCCATTTGGGAATTCTTTTAGGGTGGAGGTTTTAACATGCATAATGCCAGGGCCT GAACTACCTGATAATGAAAAATCCTCACGTCTTGTAGTCTCCTGGCGCTTGAATTTTATC CAGAGTACAATGATGAAGGGCATGATAGAAAATGGGGCTAAACAAGGGTTGAAGGATAAC TACATTCAGTTCTCTGAACTCCTGGCTCGAAATATCAGGCCAGTTGATTCAAAAGATGCA GCAGCTACTGATAAAGTTTTGTCTTCAGTACAACCAGAGCAAGAATCTGATTGGAAACTA GCATTCCGTATATTTGGAAATTTTACTGTTGTATCCTCACTGGTTGCATTCATTTATGTT TTTTCACACATCATCCTTGCAAGCCCCAGTATAATTCAAGGTCTTGAGTTTCCTGGCCTG GACCTACCAGATTCTGTTGGTGAAGTCGTGGTTTGTGGAGTTCTTGTTCTGCAAGGACAG CGTGTCCTAAATATGATTGCACGATTCATCCAGGCTAAGAGGCAGAGAGGAAGTGATCAT GGAGTCAAAGCACAAGGGAATGGTTGGTTGCTGACTGTCGCTCTGATTGATGGTACCAAT TTAGCAGCAACCAAATCATCTGGTTACTCTGATCCATATGTTGTATTTACCTGCAATGGA AAGACGAAGACTAGTTCAATTAAATTTCACACTCTGGAACCTCGGTGGAATGAAATTTTT GAATTTGATGCCATGGAAGATCCTCCATCCGTTATGAAAATAAATGTCTACGATTTTGAT GGACCATTTGATGAAGTTGAGTCTCTTGGTCATGCTGAAGTAAATTTCTTGAAATCTAAT CTATCCGAGCTTTCCGACATTTGGATTCCTCTCAAGGGTAAGCTGGCTCAAGCATGTCAG TCAAAATTGCATTTGAGAATTATCTTGAATAATTCAAGGGGTACTGAAGTCATGAAGGAC TACCTAGACAAAATGGAGAAAGAGGTTGGCAAAAAGATTGCTGTAAGGTCTCCACACACA AACTCAGCATTCCAGAAGATCTTTTCTTTGCCACCAGAAGAATTTCTAATCAATGATTTT ACCTGTCATCTAAAGCGCAAAATGCTCACACAGGGCCGCCTGTTTTTATCTCCAAGAATT ATTGGGTTCTACACTAATCTTTTTGGCCACAAAACAAAATTCTTCTTTCTTTGGGAAGAT ATCGAGGACATCCAAGTGATGCCTGCAACACTATATTCAATGGGAAGTCCATCTCTGCTT ATTATTCTTCACAAGGGCAGAGGAATGGATGCAAGGCATGGAGCAAAGCAACTTGATAAT GAAGGCCGACTCAAGTTTCATTTCCAGTCTTTTGTATCGTTCAATGTGGCACATAAAACA ATAATGGCGCTCTGGAAGGCAAGGTCCTTGACCCCTGAACAAAAAGTACAGCTGGTAGAA GAAGAATCAGAAATGAAAGACCTCCAGAATAATGAAAGTGATTCTTTCTTAGGAATAGAG GATGCAAAAATGTCAGAAGTATTTTCATCTACAAAACCTTTTGATGTATCAACACTCATG AGCATATTTGAGGGTGGTCCTTTGGAGCATCAAGTGATGGAGAAAATTGGCTGTATGGAG TACTCAGTTTCACCATGGGAGTCCGTCAGAGCTGATGCTTACCAGAGGCAAATTCATTAC AAGTTCGACAAGAGATTGGCACGCCATGAAGGGGAAGTAATGAGCACCCAACAGAAATCC CCTTTGCCTGATAAAAATGGATGGCTTGTTGAAGAAGTGATGACGCTTGAAGGTATTCCA GTTGGTGAATACTTCAACCTGCATATGCGATACCAATTGGAGCAGATCTCATCCAAGCCC AAGGCATGCAATGTCCAAGTGTCTATTGGGATCGCATGGTTAAAGAGCTGCAAGAACAGA AAGAAGATTGCTCAAGAGGTACTATCCAGTGCATCTTCTCGCCTCAAGAAGATGTTTGGC CTACTCGAGAAGGAATTGTTACCAGCCAAGTAG

Peptide Sequence

PEP ID	Os06t0297800-01
PEP Infomation	pep chromosome:IRGSP-1.0:6:11046380:11054398:1 gene:Os06g0297800 transcript:Os06t0297800-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to protein binding / zinc ion binding. (Os06t0297800-01);Similar to predicted protein. (Os06t0297800-02)
Sequence	FLRVQRPLPCFQPEPQAAVKKDRIGGAISGFLIFFFFEPRPNRDSWKKRGRREMRLLVQV SEARNLPAIDGGGGLSDPYAKLQLGRQRGKTRVAKRTLSPTWDEEFAFRVVDLKDELVVV VVDEDRYFSDDFLGQVRVPLSAVLDADNRSLGTQWYQLLPKSKKSKIKDYGEIRLTISLS LNYPEETTTLAHCVSDDLASYSDKSTELQKGSSLPNIPIEIPTSVSGGDETEIIKEDRSN GVPSFVNRLYQFFSAKPKDAEASASAPPLTTGDGNSDILEETPSTSSELPDNQDYETGVT MSFDEQLKAFGSCHEGNEIPENLSGGVLIDQVYAVAPSDLNGLLFSPSSDFLQSLAEMQG TTGLEIQQWRLENDGEVLKRVVSYTKAPTALVKAVKATEDVSYLKADGDIYATLADVSTP DVPFGNSFRVEVLTCIMPGPELPDNEKSSRLVVSWRLNFIQSTMMKGMIENGAKQGLKDN YIQFSELLARNIRPVDSKDAAATDKVLSSVQPEQESDWKLAFRIFGNFTVVSSLVAFIYV FSHIILASPSIIQGLEFPGLDLPDSVGEVVVCGVLVLQGQRVLNMIARFIQAKRQRGSDH GVKAQGNGWLLTVALIDGTNLAATKSSGYSDPYVVFTCNGKTKTSSIKFHTLEPRWNEIF EFDAMEDPPSVMKINVYDFDGPFDEVESLGHAEVNFLKSNLSELSDIWIPLKGKLAQACQ SKLHLRIILNNSRGTEVMKDYLDKMEKEVGKKIAVRSPHTNSAFQKIFSLPPEEFLINDF TCHLKRKMLTQGRLFLSPRIIGFYTNLFGHKTKFFFLWEDIEDIQVMPATLYSMGSPSLL IILHKGRGMDARHGAKQLDNEGRLKFHFQSFVSFNVAHKTIMALWKARSLTPEQKVQLVE EESEMKDLQNNESDSFLGIEDAKMSEVFSSTKPFDVSTLMSIFEGGPLEHQVMEKIGCME YSVSPWESVRADAYQRQIHYKFDKRLARHEGEVMSTQQKSPLPDKNGWLVEEVMTLEGIP VGEYFNLHMRYQLEQISSKPKACNVQVSIGIAWLKSCKNRKKIAQEVLSSASSRLKKMFG LLEKELLPAK

Transcript Sequence

Transcript ID	Os06t0297800-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:6:11046380:11054398:1 gene:Os06g0297800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to protein binding / zinc ion binding. (Os06t0297800-01);Similar to predicted protein. (Os06t0297800-02)
Sequence	GTGTTGAGTCCTCAAAACATTTTCATTCTCATTTTTTCATTTTCATTTTTCAGTTCTTCA CCTCCTCTCCTCTTCCTCTTCGCCGGCGGCTCAAATCAAAGTCTTCCGTGCCCGAAGCCG ACCACCGCCCATCCGTTGCTTCCACACAAAACCTCACCCAGGCTCCCCCCCTCCAATCGC TCTCTGATTCTGATTGGCCTCCGCAAACGCCCGCCCTGCCTGCTGCTGATGTTTGTTTTT TTCTCCTGATTTTCTTTTTTCTCATTGATTGGGGGTTGGTTTCTAGTTTATGCCCTCGTT TCTTGCCATTTCCCGCTGAGTTCGTGGCGCCTTTAATCTCGATGGATTGACTGATTGATT GATTGATTGATTGATTGGAGGCGGTGCGAGCGGGAAAGAGTGGATTGTTTCCTGGACAAG AGCAAGCGGGAAAGTTCGTTCTTGATTTCTCCGAGTTCAACGACCACTTCCATGTTTCCA ACCTGAACCACAAGCTGCAGTTAAAAAAGATAGGATAGGAGGAGCAATCTCCGGTTTCTT GATTTTTTTTTTTTTTGAACCGCGCCCAAATCGTGATTCTTGGAAGAAGAGGGGAAGGAG GGAAATGAGGCTGCTGGTGCAGGTGAGCGAGGCACGCAACCTGCCGGCGATCGACGGTGG CGGCGGGCTGAGCGACCCGTACGCGAAGCTGCAGCTGGGGAGGCAGCGTGGCAAGACCAG GGTGGCCAAGAGGACGCTGAGCCCGACCTGGGACGAGGAGTTCGCGTTCCGGGTGGTGGA CCTCAAGGACGAGCTCGTGGTGGTGGTCGTCGACGAGGACAGGTACTTCTCCGACGACTT CCTCGGCCAGGTCAGGGTGCCCCTCTCCGCCGTGCTCGACGCCGACAACCGCTCGCTCGG GACGCAGTGGTACCAGCTGCTGCCCAAGAGCAAGAAGTCCAAGATCAAGGATTACGGAGA AATTCGTCTTACAATATCTCTCTCTCTAAATTACCCTGAAGAGACAACGACACTTGCACA TTGCGTTTCAGATGACCTCGCGTCATATTCTGACAAATCAACTGAATTACAGAAAGGATC TTCTTTGCCAAATATTCCTATAGAAATACCCACGTCAGTATCAGGGGGTGATGAAACAGA AATCATCAAGGAGGATAGATCAAATGGTGTCCCATCATTTGTCAATCGTCTGTATCAATT TTTCTCAGCGAAACCAAAAGATGCAGAAGCTTCAGCTTCAGCTCCACCTCTCACTACGGG CGATGGTAATTCAGATATTCTTGAAGAAACACCATCAACTAGTTCAGAACTTCCTGATAA CCAGGATTATGAAACTGGTGTAACTATGTCCTTTGATGAACAACTAAAAGCCTTTGGATC TTGCCATGAAGGGAATGAAATACCTGAAAACTTGTCAGGTGGAGTTCTTATTGATCAAGT TTATGCTGTTGCACCCAGTGACTTGAATGGACTTCTTTTCTCACCAAGTTCAGATTTCTT GCAATCACTAGCGGAGATGCAAGGAACTACTGGTCTTGAAATCCAACAATGGAGACTTGA AAATGATGGTGAGGTCTTGAAGAGGGTAGTAAGCTACACAAAAGCTCCTACTGCACTAGT CAAGGCTGTGAAAGCAACAGAGGATGTGTCATATCTGAAGGCAGATGGAGATATATATGC AACTTTAGCTGATGTTAGTACTCCAGATGTTCCATTTGGGAATTCTTTTAGGGTGGAGGT TTTAACATGCATAATGCCAGGGCCTGAACTACCTGATAATGAAAAATCCTCACGTCTTGT AGTCTCCTGGCGCTTGAATTTTATCCAGAGTACAATGATGAAGGGCATGATAGAAAATGG GGCTAAACAAGGGTTGAAGGATAACTACATTCAGTTCTCTGAACTCCTGGCTCGAAATAT CAGGCCAGTTGATTCAAAAGATGCAGCAGCTACTGATAAAGTTTTGTCTTCAGTACAACC AGAGCAAGAATCTGATTGGAAACTAGCATTCCGTATATTTGGAAATTTTACTGTTGTATC CTCACTGGTTGCATTCATTTATGTTTTTTCACACATCATCCTTGCAAGCCCCAGTATAAT TCAAGGTCTTGAGTTTCCTGGCCTGGACCTACCAGATTCTGTTGGTGAAGTCGTGGTTTG TGGAGTTCTTGTTCTGCAAGGACAGCGTGTCCTAAATATGATTGCACGATTCATCCAGGC TAAGAGGCAGAGAGGAAGTGATCATGGAGTCAAAGCACAAGGGAATGGTTGGTTGCTGAC TGTCGCTCTGATTGATGGTACCAATTTAGCAGCAACCAAATCATCTGGTTACTCTGATCC ATATGTTGTATTTACCTGCAATGGAAAGACGAAGACTAGTTCAATTAAATTTCACACTCT GGAACCTCGGTGGAATGAAATTTTTGAATTTGATGCCATGGAAGATCCTCCATCCGTTAT GAAAATAAATGTCTACGATTTTGATGGACCATTTGATGAAGTTGAGTCTCTTGGTCATGC TGAAGTAAATTTCTTGAAATCTAATCTATCCGAGCTTTCCGACATTTGGATTCCTCTCAA GGGTAAGCTGGCTCAAGCATGTCAGTCAAAATTGCATTTGAGAATTATCTTGAATAATTC AAGGGGTACTGAAGTCATGAAGGACTACCTAGACAAAATGGAGAAAGAGGTTGGCAAAAA GATTGCTGTAAGGTCTCCACACACAAACTCAGCATTCCAGAAGATCTTTTCTTTGCCACC AGAAGAATTTCTAATCAATGATTTTACCTGTCATCTAAAGCGCAAAATGCTCACACAGGG CCGCCTGTTTTTATCTCCAAGAATTATTGGGTTCTACACTAATCTTTTTGGCCACAAAAC AAAATTCTTCTTTCTTTGGGAAGATATCGAGGACATCCAAGTGATGCCTGCAACACTATA TTCAATGGGAAGTCCATCTCTGCTTATTATTCTTCACAAGGGCAGAGGAATGGATGCAAG GCATGGAGCAAAGCAACTTGATAATGAAGGCCGACTCAAGTTTCATTTCCAGTCTTTTGT ATCGTTCAATGTGGCACATAAAACAATAATGGCGCTCTGGAAGGCAAGGTCCTTGACCCC TGAACAAAAAGTACAGCTGGTAGAAGAAGAATCAGAAATGAAAGACCTCCAGAATAATGA AAGTGATTCTTTCTTAGGAATAGAGGATGCAAAAATGTCAGAAGTATTTTCATCTACAAA ACCTTTTGATGTATCAACACTCATGAGCATATTTGAGGGTGGTCCTTTGGAGCATCAAGT GATGGAGAAAATTGGCTGTATGGAGTACTCAGTTTCACCATGGGAGTCCGTCAGAGCTGA TGCTTACCAGAGGCAAATTCATTACAAGTTCGACAAGAGATTGGCACGCCATGAAGGGGA AGTAATGAGCACCCAACAGAAATCCCCTTTGCCTGATAAAAATGGATGGCTTGTTGAAGA AGTGATGACGCTTGAAGGTATTCCAGTTGGTGAATACTTCAACCTGCATATGCGATACCA ATTGGAGCAGATCTCATCCAAGCCCAAGGCATGCAATGTCCAAGTGTCTATTGGGATCGC ATGGTTAAAGAGCTGCAAGAACAGAAAGAAGATTGCTCAAGAGGTACTATCCAGTGCATC TTCTCGCCTCAAGAAGATGTTTGGCCTACTCGAGAAGGAATTGTTACCAGCCAAGTAGGG GCCCTTTTTCATACCCTGCGTTTTCTGGTGCACCCATGTATAGCCCGAAATCGTCGTCTG GTGTCTCTTGGTTTTGACAACATCTTGTTCCTGATGCTGAGCAAGAATCAGTACATAATG CGAAAGGTTCTAACTTCGCAGGCAAGGCAGTGTACCATACCCTGATGAACATCTCCCCAT GCAAGATTCAGACTGGAGAACTGACAGCAGAGCTAGGAAGTTGTTCTAGTCATGAAAACG TTACTGTTCAAATGCAGTTCTTGAACAAGAGGTTTGGTATCTTGCCTATACTCTTCAAGA TAGATCATTCGAAACTTTGGTCTGTCATTGTAGTTATCAGTTGTCAGTCCCTTTAGCAAC AGAAAACAATGCAGCTTCCGTAGCCATTCTTTTTTTAGATTTTTACTCCAGCAAAGATTA CATGATCTGTTGTTACGGACAAAAGAAATGGGAAAATTTACCAGAAAAACTGAGCCACTG TTTAACC