Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os06t0297700-01
CDS Infomation	cds chromosome:IRGSP-1.0:6:11040004:11043309:1 gene:Os06g0297700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to predicted protein. (Os06t0297700-01)
Sequence	ATGGCGCTCGTGGCTAAGGGTGAGCCCAACGGAGGCGCGTGCAAGGACGGGGAGGTGATG GACCTCCCCTGGTCGGAGATGTTCCGCTCCGCGTCGCTGCGGCTGCCGAAGCAGGAGGAG CCGACGACGACGAAGAAGCCGCAGGGGAAGGGGAAGGCGTCGGCGGCGGAGGAGGATATC GGGGGCTTGTCGCTGGAGCCCGACGCGCGGCTGGCGCTGTACATCGCGATGGCGCACGCG GGGCTCGCCACGGCGCTGCTCGTGGTGTACGGGCTGTACAGGCTGCTCGCCGACTTCCTC CGCCCGCTGCAGTGGGCGCTGCTCTGCTCCATCCCGCTCAGGGAGACGCAGCGCGCGCTC GTCGCCTTCTGGGAGCCCCCGCTCCGCGGGGGGCTCGGCGCCGCCGTGCTCGCGCTCCTG CGGCGCCCGCTCCCGCCGTCGCCGTCGTTCCCGCGCCTCCTCCGCTGGCTCGCCTCCTCC TTCCTCTTCCTCCTCCTGCTCGACCGCCTCGGCACCGCCACCGCGCTGGTCCTCCTCGCC CTCTCCCTCGCCTTCTTCGCCGCATCCCCCAAGCCCTCCTCCTTCCTATCCCGCGCCGCC TCCTCCCGAATCGCCGGACGAACACCCTCCTCCCGCTGCCTCTTCCTTACCGGCGGCATC CTCCGCCACCTCAAGACGCTCGTCGCCGTCGGCCTCATGCTCGGGATGATACTCGGGTTC CTATCCGGCAGCGTCTTCTTCTCCTACAAGATTGGGCTCGAGGGCAAGGACGCTGTCATG TCCCTCAAGTCCCATGTCGAGAATGGCAACTACTCTGAAAAGATTGGCCTCAAGAAGTGG CTTGACGACAATGACATCCCCGGCTTGGTTGATCAGTATTCCGCGAAGCTCTACGATACC GTGTGGGAGCAGATAGATCAGTTAGCAGTGCAGTACAACCTTACCGATTTCACTAGCGGA TTCCGGCATTTCTTGATCAGCCAATCAGTTGACCCATCTGGTGCAAAGGGCAAGGAGCTC ATCACATCCGGACCACACCCGTACTCGATGAAGCTACAGGTTATTGCGAAGCATGTGAAG AACAGGGAGTGGATGGACATTTACAGGGAGCTGGACTCATTCTTTAGGGAGCTGTTAATC ACAAGGGAGGATTTGGTGGTGAAGGCCAAGGGATTGGCATTGCAGGGGGCTGAGATCGCA AAAAGTCTGCTGTCTAGCAGCACATCGGTGCTCGGTGGTAGTGCCAATCTGATGTTATCC ATTACTCTCCACATTGTCTCTGGTGCAGCTGAGGTGCTCAATTTTGTGTCACAGTTGATG GTTTTCTTGTGGGTGCTGTACTACCTCATCACTGTAGAGGGAGGTGGGGCTACAGAGCAG GTCATTGATCTTTTGCCATTGTCAAAACAAGTAAAGGATCGATGCGTCGAGGTCATCGAC CATGCCATTAGTAGTGTCTTGTTAGCCACTGCCAAGATTGCCATTTTCCAGGGATGCCTG ACATGGCTGTTGTTCAAGCTCTTCAAGGTGCATTTTGTGTACACATCAACTGTGTTTGCA ATCATCAGTGCACTTCTGCCAATACTCCCACCATGGTTGTCCTCGATATTTGCCGCAGGA CAGCTGCTCATGGAAGGGAGATATGTGCTCGCTATTGTGGTGACAGTGGTTCATCTCATA ATCATGGATTATGGAACTACAGTCATTCAGGAGGATATACCCGGGTACAATGGATATCTC ACTGGCCTTAGCATAATTGGTGGCATGGCATTGTTCCCCAATGCTCTGGAGGGTGCAATA TTAGGTCCCCTTATAATGACAGTGGTGATGGCATTGAAGAACCTGTACACAGAGTTTGTG CTTGCTGATTCAGAGGAGACCAGCAGCTAG

Peptide Sequence

PEP ID	Os06t0297700-01
PEP Infomation	pep chromosome:IRGSP-1.0:6:11040004:11043309:1 gene:Os06g0297700 transcript:Os06t0297700-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to predicted protein. (Os06t0297700-01)
Sequence	MALVAKGEPNGGACKDGEVMDLPWSEMFRSASLRLPKQEEPTTTKKPQGKGKASAAEEDI GGLSLEPDARLALYIAMAHAGLATALLVVYGLYRLLADFLRPLQWALLCSIPLRETQRAL VAFWEPPLRGGLGAAVLALLRRPLPPSPSFPRLLRWLASSFLFLLLLDRLGTATALVLLA LSLAFFAASPKPSSFLSRAASSRIAGRTPSSRCLFLTGGILRHLKTLVAVGLMLGMILGF LSGSVFFSYKIGLEGKDAVMSLKSHVENGNYSEKIGLKKWLDDNDIPGLVDQYSAKLYDT VWEQIDQLAVQYNLTDFTSGFRHFLISQSVDPSGAKGKELITSGPHPYSMKLQVIAKHVK NREWMDIYRELDSFFRELLITREDLVVKAKGLALQGAEIAKSLLSSSTSVLGGSANLMLS ITLHIVSGAAEVLNFVSQLMVFLWVLYYLITVEGGGATEQVIDLLPLSKQVKDRCVEVID HAISSVLLATAKIAIFQGCLTWLLFKLFKVHFVYTSTVFAIISALLPILPPWLSSIFAAG QLLMEGRYVLAIVVTVVHLIIMDYGTTVIQEDIPGYNGYLTGLSIIGGMALFPNALEGAI LGPLIMTVVMALKNLYTEFVLADSEETSS

Transcript Sequence

Transcript ID	Os06t0297700-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:6:11040004:11043309:1 gene:Os06g0297700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to predicted protein. (Os06t0297700-01)
Sequence	TTACCCCACCCGCGCTAATCACCCCCCAAATCCCCTCCTCCCTCCCATTCCATTTCCACC ACCACCCGGAGGCGGAGCTTGCCCTCCGCGGCGGCGGCGGCGAAGTCGGCGGCGCAGGCA TTCCGGCGCCGGTGACATGGCGCTCGTGGCTAAGGGTGAGCCCAACGGAGGCGCGTGCAA GGACGGGGAGGTGATGGACCTCCCCTGGTCGGAGATGTTCCGCTCCGCGTCGCTGCGGCT GCCGAAGCAGGAGGAGCCGACGACGACGAAGAAGCCGCAGGGGAAGGGGAAGGCGTCGGC GGCGGAGGAGGATATCGGGGGCTTGTCGCTGGAGCCCGACGCGCGGCTGGCGCTGTACAT CGCGATGGCGCACGCGGGGCTCGCCACGGCGCTGCTCGTGGTGTACGGGCTGTACAGGCT GCTCGCCGACTTCCTCCGCCCGCTGCAGTGGGCGCTGCTCTGCTCCATCCCGCTCAGGGA GACGCAGCGCGCGCTCGTCGCCTTCTGGGAGCCCCCGCTCCGCGGGGGGCTCGGCGCCGC CGTGCTCGCGCTCCTGCGGCGCCCGCTCCCGCCGTCGCCGTCGTTCCCGCGCCTCCTCCG CTGGCTCGCCTCCTCCTTCCTCTTCCTCCTCCTGCTCGACCGCCTCGGCACCGCCACCGC GCTGGTCCTCCTCGCCCTCTCCCTCGCCTTCTTCGCCGCATCCCCCAAGCCCTCCTCCTT CCTATCCCGCGCCGCCTCCTCCCGAATCGCCGGACGAACACCCTCCTCCCGCTGCCTCTT CCTTACCGGCGGCATCCTCCGCCACCTCAAGACGCTCGTCGCCGTCGGCCTCATGCTCGG GATGATACTCGGGTTCCTATCCGGCAGCGTCTTCTTCTCCTACAAGATTGGGCTCGAGGG CAAGGACGCTGTCATGTCCCTCAAGTCCCATGTCGAGAATGGCAACTACTCTGAAAAGAT TGGCCTCAAGAAGTGGCTTGACGACAATGACATCCCCGGCTTGGTTGATCAGTATTCCGC GAAGCTCTACGATACCGTGTGGGAGCAGATAGATCAGTTAGCAGTGCAGTACAACCTTAC CGATTTCACTAGCGGATTCCGGCATTTCTTGATCAGCCAATCAGTTGACCCATCTGGTGC AAAGGGCAAGGAGCTCATCACATCCGGACCACACCCGTACTCGATGAAGCTACAGGTTAT TGCGAAGCATGTGAAGAACAGGGAGTGGATGGACATTTACAGGGAGCTGGACTCATTCTT TAGGGAGCTGTTAATCACAAGGGAGGATTTGGTGGTGAAGGCCAAGGGATTGGCATTGCA GGGGGCTGAGATCGCAAAAAGTCTGCTGTCTAGCAGCACATCGGTGCTCGGTGGTAGTGC CAATCTGATGTTATCCATTACTCTCCACATTGTCTCTGGTGCAGCTGAGGTGCTCAATTT TGTGTCACAGTTGATGGTTTTCTTGTGGGTGCTGTACTACCTCATCACTGTAGAGGGAGG TGGGGCTACAGAGCAGGTCATTGATCTTTTGCCATTGTCAAAACAAGTAAAGGATCGATG CGTCGAGGTCATCGACCATGCCATTAGTAGTGTCTTGTTAGCCACTGCCAAGATTGCCAT TTTCCAGGGATGCCTGACATGGCTGTTGTTCAAGCTCTTCAAGGTGCATTTTGTGTACAC ATCAACTGTGTTTGCAATCATCAGTGCACTTCTGCCAATACTCCCACCATGGTTGTCCTC GATATTTGCCGCAGGACAGCTGCTCATGGAAGGGAGATATGTGCTCGCTATTGTGGTGAC AGTGGTTCATCTCATAATCATGGATTATGGAACTACAGTCATTCAGGAGGATATACCCGG GTACAATGGATATCTCACTGGCCTTAGCATAATTGGTGGCATGGCATTGTTCCCCAATGC TCTGGAGGGTGCAATATTAGGTCCCCTTATAATGACAGTGGTGATGGCATTGAAGAACCT GTACACAGAGTTTGTGCTTGCTGATTCAGAGGAGACCAGCAGCTAGCATGAGATGGAAAA CAACTTGTCCTGAGGGAATACATGTAGGATTTTTACTCTGTTTCCATGATGGCTTTGCCC TTGTACCATAGTTGAGTTTGCATTGCACCAGTTGTGATACTTATCCTGGTTGTAATTTTC CCTCTCTGTAGTGCTACAATGCTACTTAATCTGCATTTGATCTTTCCATAGTTTTGGTTT TGTTATCTGTGGAAAATCCCCTCTAGTTGATTGGAACCAAAATGTACAGTATTAGTAAGA TTGGTGCTATGGTCAATGAAATGAATAAACTGCATATTAGCATTGTTGATATGTTGATGT TGTTATGTTATCTAGTTCTGATGCGCCTTATTACCTGCATCCAACTTCTGTAATTTTTAG TACAAATAATGAAATTAGTCTTGAGG