Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os06t0296700-01
CDS Infomation	cds chromosome:IRGSP-1.0:6:10957733:10960700:-1 gene:Os06g0296700 gene_biotype:protein_coding transcript_biotype:protein_coding description:C-type lectin, conserved site domain containing protein. (Os06t0296700-01)
Sequence	ATGGAGAATAGCGAGCAAGAGAGGACGGACTCACCATTGGAGTATGATTTGAGGAAGTAC CTCCTTCTGTTGGCCACCCTTGTGGCCACGGTGACATATGGTGCAGGATTCAGCCCGCCG GGGGGTGTCTGGCAGGACACCGAGGCCGGGCACCTCGCTGGTGACTCCATCATCCGGGAT AGCCAGTATCGCCGATACCTTATGTTCTTCTACTGCAACGCGACTGCATTCGCGCTGTCC ATCGTGGTCATCATCCTCATCTTCATCCTTGCTATCCTGCATGAGAAGGGGAAGTTACAG ATCCCCATGCTTCCACTGCGAGCAGCCATGGTGCTGGACCTGCTAAGCCTCATTGGGGCC TATGCTGCAGGGACCAGTCGGGGTGTTCTCACAGCCGGCAACGTCTCTGCACTTGTGGCT ACTTTCATCTATATGGTGGCACAGATGGTGGTAACTTTATGGCTTGACAAGAAACAGACT CAGGATATAAGCTCAGGTGATGAGAAGAAAAAACGGCACCGCAAGGTACTGATGCTTCTC GCAACATTTGTGGCAAGCATCACATACATGGCTGGGCTGAGCGCACCGGGTGGCTACTGG GATAACAACCAGGAGGGCCACCATCCAGGCGATCCCGTCCTGTGGGAACACCACTCTCGC CGTCTGAGGGCGTTCTTTGTCTGCAACACAATTGCATTTGTCGCATCCCTGCTCATCATC ATGCTGCTTCTGGACAAGAAGCAGCGGATCTTCTTACCCCTCGACAAGATAAAGATCACC ATCACCGTACGGACTTATGTGCTCTACGCGTACATCACCATTGCTCTTTTAGGCCTTGTG GGGGCCTATGTGGCTGGCAGCTGCAGAAAGCCTGACACTACCATCTATGTACTCAGTCTG GTTGGTGCTGTTCTTTTATGCATAGGCGCCCTCCAGGCAGTCCTATTTTTTCTGCCACAA CTTTCAAACATATCCTGCTTGCCAATAATTGCAAAGTTATCATGTTCACCGGGAGGGCCA TCAGATAGCAGTTCCAGAAAGAATACAAGCAGTAAGACAGATATTCTGGAGAAGGCCCAA TCTCTTGTTGTACTGCTTGCCACTCTTGTGGCAACTGTTACTTACCAAGCAGGGCTAGTC CCACCAGGTGGTGTCTGGCAGAAAAACCAAGATGGGCACATGGCTGGCGAACCAATACTC TTATCCACACAAGCCAAACGTTACAAGGTGTTCTTTTACTGTAACTCGACAGCCTTTGCA GCATCATTGGTTGTCATAGTTTTGGTCCGGTATAAACCTTTGCTCAGGCGCCGCATTCTA GAGATAACTATGATTTTGGATCTGTTTGGTCTCATGGGTGCATATGCTGCTGGAAGCTGC CGGGACATAACCACATCAGTTTACATCATTGCCTTGGCAGGCGGTGTTCTAGTCTATGTG GTGATTCATGTTGTGTTCTTCACGCTTGAAGACAATGACAAGGAGAAGGAAGTTGGGAAC ACGAATTCTGTACGAAATGGTTCAGTTGTGCGCACCCAAAATAATTCAGCTGAGGGCAAT CTTGCTGAGAAAGATTCATGTATTGACAAAAGGCGCAAGAGGCTGCTCCTTTTCGCTGTT TTGGGCGCGACCCTCACTTATCAAGCTGGGTTGACCCCACCGGGTGGGTTCAGAGTTGTG GATGATGGTTTTGGGCGCCATGCTGGTGATCCAATACTCTTTTACAACTTTCCACGCCGT TACAAGGCATTTCTCTATTGTAACTCGGTAAGCTTCATGTCATCTCTTTCCCTCATCATA CTCCTCGTGAACCCAAATCTGTATAGGCCAGCTATACAAAGCTATGCTCTTTCGGTTTGC ACTGTAGCAGGCTTGTTTGCTCTTCTGGGAGCCTATGCTGCCGGAAGCACTCAACATCTG AAAACATCCATTTATGTCTTTGTGTTGGTAGCTGTGGTGCTTTTCATTATGATCATACTC CTGGTGTGTTTCTATCAAAGTGAGAGCAAAGAGAAGCGAGATGACATATCCAAGGAGCCC GTTGAGAAAGACAAGGACAGAGCCAAATACCATGCCAAGCGCAAGTACTTGATGTTGCTA GGGGTCCTGGCTGCAAGTGTTACTTACTCCCAGGCTGGTCTGAACCCACCTGGCGGTGTG TGGCAGGGTAATAGTGACGGGCATGGTGTGGGTCACTCGGTTATGCATGACAATAAGAGG TATCGCTACCTCACCTTCTTCTACAGCAACTCAACTTCTTTTGTGGCATCTATTGTTGTT ATCATCCTATTGCTACCGACGGAACTGCTAAAGAAGAACAGGTGGCTAAGGGTGATGAAT ATTACAATTGTGCTGGACTTGCTCGGCCTACTGCTAGCCTACGTGGCTGGGTCGAGCATG AGATGGGAACCTTCTGGATATGTCATTGCATTTGTTATTGGTGCACTAGGCTGTGCTGCA ATCCACAAGTTTTTGTCATTTGTCAGAAGGTCTCAGCAACAGGGGCAAGGAAATGATCAG CCTTCTCGGTTACCAGAAGGCGGCAGTCAAGCTTAG

Peptide Sequence

PEP ID	Os06t0296700-01
PEP Infomation	pep chromosome:IRGSP-1.0:6:10957733:10960700:-1 gene:Os06g0296700 transcript:Os06t0296700-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:C-type lectin, conserved site domain containing protein. (Os06t0296700-01)
Sequence	MENSEQERTDSPLEYDLRKYLLLLATLVATVTYGAGFSPPGGVWQDTEAGHLAGDSIIRD SQYRRYLMFFYCNATAFALSIVVIILIFILAILHEKGKLQIPMLPLRAAMVLDLLSLIGA YAAGTSRGVLTAGNVSALVATFIYMVAQMVVTLWLDKKQTQDISSGDEKKKRHRKVLMLL ATFVASITYMAGLSAPGGYWDNNQEGHHPGDPVLWEHHSRRLRAFFVCNTIAFVASLLII MLLLDKKQRIFLPLDKIKITITVRTYVLYAYITIALLGLVGAYVAGSCRKPDTTIYVLSL VGAVLLCIGALQAVLFFLPQLSNISCLPIIAKLSCSPGGPSDSSSRKNTSSKTDILEKAQ SLVVLLATLVATVTYQAGLVPPGGVWQKNQDGHMAGEPILLSTQAKRYKVFFYCNSTAFA ASLVVIVLVRYKPLLRRRILEITMILDLFGLMGAYAAGSCRDITTSVYIIALAGGVLVYV VIHVVFFTLEDNDKEKEVGNTNSVRNGSVVRTQNNSAEGNLAEKDSCIDKRRKRLLLFAV LGATLTYQAGLTPPGGFRVVDDGFGRHAGDPILFYNFPRRYKAFLYCNSVSFMSSLSLII LLVNPNLYRPAIQSYALSVCTVAGLFALLGAYAAGSTQHLKTSIYVFVLVAVVLFIMIIL LVCFYQSESKEKRDDISKEPVEKDKDRAKYHAKRKYLMLLGVLAASVTYSQAGLNPPGGV WQGNSDGHGVGHSVMHDNKRYRYLTFFYSNSTSFVASIVVIILLLPTELLKKNRWLRVMN ITIVLDLLGLLLAYVAGSSMRWEPSGYVIAFVIGALGCAAIHKFLSFVRRSQQQGQGNDQ PSRLPEGGSQA

Transcript Sequence

Transcript ID	Os06t0296700-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:6:10957733:10960700:-1 gene:Os06g0296700 gene_biotype:protein_coding transcript_biotype:protein_coding description:C-type lectin, conserved site domain containing protein. (Os06t0296700-01)
Sequence	ATTAGCATTGATCCATTCACAACTTGGAGTACCTCCTTTCTGCTTCTATCTCTCCTGCAA ATGGAGAATAGCGAGCAAGAGAGGACGGACTCACCATTGGAGTATGATTTGAGGAAGTAC CTCCTTCTGTTGGCCACCCTTGTGGCCACGGTGACATATGGTGCAGGATTCAGCCCGCCG GGGGGTGTCTGGCAGGACACCGAGGCCGGGCACCTCGCTGGTGACTCCATCATCCGGGAT AGCCAGTATCGCCGATACCTTATGTTCTTCTACTGCAACGCGACTGCATTCGCGCTGTCC ATCGTGGTCATCATCCTCATCTTCATCCTTGCTATCCTGCATGAGAAGGGGAAGTTACAG ATCCCCATGCTTCCACTGCGAGCAGCCATGGTGCTGGACCTGCTAAGCCTCATTGGGGCC TATGCTGCAGGGACCAGTCGGGGTGTTCTCACAGCCGGCAACGTCTCTGCACTTGTGGCT ACTTTCATCTATATGGTGGCACAGATGGTGGTAACTTTATGGCTTGACAAGAAACAGACT CAGGATATAAGCTCAGGTGATGAGAAGAAAAAACGGCACCGCAAGGTACTGATGCTTCTC GCAACATTTGTGGCAAGCATCACATACATGGCTGGGCTGAGCGCACCGGGTGGCTACTGG GATAACAACCAGGAGGGCCACCATCCAGGCGATCCCGTCCTGTGGGAACACCACTCTCGC CGTCTGAGGGCGTTCTTTGTCTGCAACACAATTGCATTTGTCGCATCCCTGCTCATCATC ATGCTGCTTCTGGACAAGAAGCAGCGGATCTTCTTACCCCTCGACAAGATAAAGATCACC ATCACCGTACGGACTTATGTGCTCTACGCGTACATCACCATTGCTCTTTTAGGCCTTGTG GGGGCCTATGTGGCTGGCAGCTGCAGAAAGCCTGACACTACCATCTATGTACTCAGTCTG GTTGGTGCTGTTCTTTTATGCATAGGCGCCCTCCAGGCAGTCCTATTTTTTCTGCCACAA CTTTCAAACATATCCTGCTTGCCAATAATTGCAAAGTTATCATGTTCACCGGGAGGGCCA TCAGATAGCAGTTCCAGAAAGAATACAAGCAGTAAGACAGATATTCTGGAGAAGGCCCAA TCTCTTGTTGTACTGCTTGCCACTCTTGTGGCAACTGTTACTTACCAAGCAGGGCTAGTC CCACCAGGTGGTGTCTGGCAGAAAAACCAAGATGGGCACATGGCTGGCGAACCAATACTC TTATCCACACAAGCCAAACGTTACAAGGTGTTCTTTTACTGTAACTCGACAGCCTTTGCA GCATCATTGGTTGTCATAGTTTTGGTCCGGTATAAACCTTTGCTCAGGCGCCGCATTCTA GAGATAACTATGATTTTGGATCTGTTTGGTCTCATGGGTGCATATGCTGCTGGAAGCTGC CGGGACATAACCACATCAGTTTACATCATTGCCTTGGCAGGCGGTGTTCTAGTCTATGTG GTGATTCATGTTGTGTTCTTCACGCTTGAAGACAATGACAAGGAGAAGGAAGTTGGGAAC ACGAATTCTGTACGAAATGGTTCAGTTGTGCGCACCCAAAATAATTCAGCTGAGGGCAAT CTTGCTGAGAAAGATTCATGTATTGACAAAAGGCGCAAGAGGCTGCTCCTTTTCGCTGTT TTGGGCGCGACCCTCACTTATCAAGCTGGGTTGACCCCACCGGGTGGGTTCAGAGTTGTG GATGATGGTTTTGGGCGCCATGCTGGTGATCCAATACTCTTTTACAACTTTCCACGCCGT TACAAGGCATTTCTCTATTGTAACTCGGTAAGCTTCATGTCATCTCTTTCCCTCATCATA CTCCTCGTGAACCCAAATCTGTATAGGCCAGCTATACAAAGCTATGCTCTTTCGGTTTGC ACTGTAGCAGGCTTGTTTGCTCTTCTGGGAGCCTATGCTGCCGGAAGCACTCAACATCTG AAAACATCCATTTATGTCTTTGTGTTGGTAGCTGTGGTGCTTTTCATTATGATCATACTC CTGGTGTGTTTCTATCAAAGTGAGAGCAAAGAGAAGCGAGATGACATATCCAAGGAGCCC GTTGAGAAAGACAAGGACAGAGCCAAATACCATGCCAAGCGCAAGTACTTGATGTTGCTA GGGGTCCTGGCTGCAAGTGTTACTTACTCCCAGGCTGGTCTGAACCCACCTGGCGGTGTG TGGCAGGGTAATAGTGACGGGCATGGTGTGGGTCACTCGGTTATGCATGACAATAAGAGG TATCGCTACCTCACCTTCTTCTACAGCAACTCAACTTCTTTTGTGGCATCTATTGTTGTT ATCATCCTATTGCTACCGACGGAACTGCTAAAGAAGAACAGGTGGCTAAGGGTGATGAAT ATTACAATTGTGCTGGACTTGCTCGGCCTACTGCTAGCCTACGTGGCTGGGTCGAGCATG AGATGGGAACCTTCTGGATATGTCATTGCATTTGTTATTGGTGCACTAGGCTGTGCTGCA ATCCACAAGTTTTTGTCATTTGTCAGAAGGTCTCAGCAACAGGGGCAAGGAAATGATCAG CCTTCTCGGTTACCAGAAGGCGGCAGTCAAGCTTAGATGTTGTTGGCATGGTAACGAGCG GATTAGAGGGCTCAAGTGTAGCAAACACTCAAAAAGTACTGCCATTTTTTTCTTATCTCC TTTTCGAGGAAATAATGTTGCTATTTTTGGAATTTTTTTAAAAAATAATACGATTTTAAT AGAAAATCGCAAAAATATAGGTCGGTTCGACGAAATCGTAAATTTAGCACCCTGTCG