Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os06t0293500-01
CDS Infomation	cds chromosome:IRGSP-1.0:6:10780823:10784833:-1 gene:Os06g0293500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os06t0293500-01)
Sequence	ATGGCGTCGCCGGACACAGGAACAACGCCGCCGGCGACGGCTGATCAGCAGCCGCCGAAG CCGCCATCATGGGAGTACCAGCTGAGGGAGTACCTCCTGCTGCTGAGCTCGGTGGTGGCC ATCGCGACGTACTCCGCCGGCCTGGCGCCGCCGGGCGGGGTGCGGCAGAAGGACGCCGGC GGCGGCGGGCAGTACAAGGCCGGCGACCCGACGCTCCAGGACATCGCCTCCGCCGGCGGC GGCGCGGCGCACGCGCGGTACCTCGCGTTCTACTACTGCAACGCGACCGCCTTCGCGGCG TCGCTGGTGGTGAACCTCCTGCTCCTCGTCCTCGAGGAGGCGAGCACTGTGGGGCTCGCC ATGCTCCGCACGGTCATGGTGCTCGACGTCCTCGCGCTCATGGCGGCCTACGCCGCCGGC AGCTGCCGGGACCTGCCCAGCACCGTCTACGTCTCCACCCTCGTGGTCGCCCTCTCCACC TACCTCGCCATCAGGATCATCTACCAGACCGGAGGAAATCCATTAATATCGGCGACGACC ACCACCACCACCTCGCCCGCCGCCGCCGCCGCCGCCGCCGGCGACGACGACGACAACCAG CTGCGCAAGGTGCTGATGCTGCTGGCGACGTTCGCGACGGAGATCACGTACACGGCGGGG CTGGGCCCGCCGGGCGGGTTCCAGGACGACGGGGGCCCGACGCTGCGGTCGGCCGGGCGC GGGCAGTCGGCGCGGCTGGCGACCTTCTTCTACTGCAACACGGCGGCGTTCGTGGCGTCG CTGTCCATCGTCGTGCCGCTGCTGAGCAGCAGGCTGCAGAGGATGCACCTCGAGCTGTAC CCGCCCATCCTCGCCGCGCTGCTCGGCCTCATGGGCGCGTACACCGCCGGGAGCTCCAGG GATCTCAGGACGATCGCCTACGTCGTCGCCCTGGTCGCCGCGGTGCTTGCGTATATCCTC CTCGCCATGGCGATTGCTCTGAAGAAGAAGAAGCACGACGTCGACCTCGCCGGTGGGGTA GAAGATTCAGAGACAGCTAGGCCTCCTAGGAATGAAAAAGATGGGCAATTAGAAGGTGAA AAGGGGAGCAAAAATAATGAACCAATGAAGGATAACGATTTTGTACTACTGCTTGCCACT CTCGCGGCCAGCATCACATACCAAGCTGGGTTGGACCCTCCAGGAGGCGTCTGGTCAGAG GATGACAAGCTCTACGGGCGTAAAGCTGGTGACCCAATACTCTTATCCACGCATGTTGAA CGCTACAAGGCGTTCTTCTACTGCAATTCAACTGCGTTTGCAGCATCCTTGGTTGTCATC CTAATGGTCCAGAGTAAGATTGTTAAGGGCAAAGCACTAGTGATAGCAACGATGATACTG GACCTGTTTGGCCTCATTGGAGCATACGCCGCAGGGAGTTGCCGAGATGTGAGCACATCC ATCTACGTCATTGCCCTAGCTGGAGCTGTCCTGGTCTATGTGGTGATCCATGTTGTGTTC TGGCCTGACGATTGTTACGTGAGCAATCAGAAGGACAAGGAGGTAGAGAAGCGGAGGGAG CGGCTTCTCCTTCTCGCGATCCTAGTGGCCACCATTGCCTACCAGGCTGGGCTAACCCCA CCAGGTGGCTTTTGGGACAAAGACGATGGCGAATCCGGCCACCATGCAGGTGTCCCTGTC CTCCTCGACAACTACCCAAGAAGGTATCATGCATTCTTCTACTGCAATGCAACAGCCTTC ATGGCGTCCGTTGCACTCATCATCTTGCTCGTCAACCCTAAGCTGTACAAGCTAGGGATA AGGTGTTATGCGCTATACGTGTGCATGATGGTTGGCATGTTTGGACTCATGGGGGCCTAC GCTGCTGGTAGTGCCCGGAAAGTGCGGACATCTATCTACGTCTTTGTGTTAGTCGGTGTG GTGATTGCCTTCCTTCTCGTGCAACTCGTATATTTCAACATTCAGGCAGTATGGAAGCAG CTCCTTGTGTTCCTCAACGTCAAGAAGGAGCCTACCTCTAATTCAGATTCAGCAAACACA ACAAATGGGTCATCATCTGATTCAAAACATAACATTGCTTCCAACACTGAAGAGGAGTCC AAAAAGAAAGAGTACCTGATGACACTTGCCATCCTGGCTGCAAGCGTCACATACCAGGCC GGCCTAAACCCGCCGGGTAGCATCTGGCAGGATGGAGGGAATGTGGGTAACCCCGTGATG CGTGACAACAACTACCCTCGGTACAACGCGTTCTTCTACTGCAACTCTACATCCTTTATG GCATCCATTATTGTCATCATCCTGCTGCTACAGCAGTATCAAAAGAAGTATGGTGGTTTC CTGCTCTATGCCATGAATATGGTCATCGTGGTCGATCTGCTCGGCCTCCTTGGGGCTTAC GCGGCCGGCAGCTGCAGAGACTGGGAGACGTCTGGGTATGTCATCGCTCTGGCTGTTGTT GTGCTTGCCTGCATCATGATCCACTTCATGTTGTTGTACCATAATGGAAGGTCCAAAGGA AGGGTGGGAGGAGTCCAAGAGATTAACACACTTCCGGTCAACCATAGTTAA

Peptide Sequence

PEP ID	Os06t0293500-01
PEP Infomation	pep chromosome:IRGSP-1.0:6:10780823:10784833:-1 gene:Os06g0293500 transcript:Os06t0293500-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os06t0293500-01)
Sequence	MASPDTGTTPPATADQQPPKPPSWEYQLREYLLLLSSVVAIATYSAGLAPPGGVRQKDAG GGGQYKAGDPTLQDIASAGGGAAHARYLAFYYCNATAFAASLVVNLLLLVLEEASTVGLA MLRTVMVLDVLALMAAYAAGSCRDLPSTVYVSTLVVALSTYLAIRIIYQTGGNPLISATT TTTTSPAAAAAAAGDDDDNQLRKVLMLLATFATEITYTAGLGPPGGFQDDGGPTLRSAGR GQSARLATFFYCNTAAFVASLSIVVPLLSSRLQRMHLELYPPILAALLGLMGAYTAGSSR DLRTIAYVVALVAAVLAYILLAMAIALKKKKHDVDLAGGVEDSETARPPRNEKDGQLEGE KGSKNNEPMKDNDFVLLLATLAASITYQAGLDPPGGVWSEDDKLYGRKAGDPILLSTHVE RYKAFFYCNSTAFAASLVVILMVQSKIVKGKALVIATMILDLFGLIGAYAAGSCRDVSTS IYVIALAGAVLVYVVIHVVFWPDDCYVSNQKDKEVEKRRERLLLLAILVATIAYQAGLTP PGGFWDKDDGESGHHAGVPVLLDNYPRRYHAFFYCNATAFMASVALIILLVNPKLYKLGI RCYALYVCMMVGMFGLMGAYAAGSARKVRTSIYVFVLVGVVIAFLLVQLVYFNIQAVWKQ LLVFLNVKKEPTSNSDSANTTNGSSSDSKHNIASNTEEESKKKEYLMTLAILAASVTYQA GLNPPGSIWQDGGNVGNPVMRDNNYPRYNAFFYCNSTSFMASIIVIILLLQQYQKKYGGF LLYAMNMVIVVDLLGLLGAYAAGSCRDWETSGYVIALAVVVLACIMIHFMLLYHNGRSKG RVGGVQEINTLPVNHS

Transcript Sequence

Transcript ID	Os06t0293500-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:6:10780823:10784833:-1 gene:Os06g0293500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os06t0293500-01)
Sequence	GTGCTCGATCGCATTGCAACACCAAGAAAGCTACAGCCTCGAATCGAATATGGCGTCGCC GGACACAGGAACAACGCCGCCGGCGACGGCTGATCAGCAGCCGCCGAAGCCGCCATCATG GGAGTACCAGCTGAGGGAGTACCTCCTGCTGCTGAGCTCGGTGGTGGCCATCGCGACGTA CTCCGCCGGCCTGGCGCCGCCGGGCGGGGTGCGGCAGAAGGACGCCGGCGGCGGCGGGCA GTACAAGGCCGGCGACCCGACGCTCCAGGACATCGCCTCCGCCGGCGGCGGCGCGGCGCA CGCGCGGTACCTCGCGTTCTACTACTGCAACGCGACCGCCTTCGCGGCGTCGCTGGTGGT GAACCTCCTGCTCCTCGTCCTCGAGGAGGCGAGCACTGTGGGGCTCGCCATGCTCCGCAC GGTCATGGTGCTCGACGTCCTCGCGCTCATGGCGGCCTACGCCGCCGGCAGCTGCCGGGA CCTGCCCAGCACCGTCTACGTCTCCACCCTCGTGGTCGCCCTCTCCACCTACCTCGCCAT CAGGATCATCTACCAGACCGGAGGAAATCCATTAATATCGGCGACGACCACCACCACCAC CTCGCCCGCCGCCGCCGCCGCCGCCGCCGGCGACGACGACGACAACCAGCTGCGCAAGGT GCTGATGCTGCTGGCGACGTTCGCGACGGAGATCACGTACACGGCGGGGCTGGGCCCGCC GGGCGGGTTCCAGGACGACGGGGGCCCGACGCTGCGGTCGGCCGGGCGCGGGCAGTCGGC GCGGCTGGCGACCTTCTTCTACTGCAACACGGCGGCGTTCGTGGCGTCGCTGTCCATCGT CGTGCCGCTGCTGAGCAGCAGGCTGCAGAGGATGCACCTCGAGCTGTACCCGCCCATCCT CGCCGCGCTGCTCGGCCTCATGGGCGCGTACACCGCCGGGAGCTCCAGGGATCTCAGGAC GATCGCCTACGTCGTCGCCCTGGTCGCCGCGGTGCTTGCGTATATCCTCCTCGCCATGGC GATTGCTCTGAAGAAGAAGAAGCACGACGTCGACCTCGCCGGTGGGGTAGAAGATTCAGA GACAGCTAGGCCTCCTAGGAATGAAAAAGATGGGCAATTAGAAGGTGAAAAGGGGAGCAA AAATAATGAACCAATGAAGGATAACGATTTTGTACTACTGCTTGCCACTCTCGCGGCCAG CATCACATACCAAGCTGGGTTGGACCCTCCAGGAGGCGTCTGGTCAGAGGATGACAAGCT CTACGGGCGTAAAGCTGGTGACCCAATACTCTTATCCACGCATGTTGAACGCTACAAGGC GTTCTTCTACTGCAATTCAACTGCGTTTGCAGCATCCTTGGTTGTCATCCTAATGGTCCA GAGTAAGATTGTTAAGGGCAAAGCACTAGTGATAGCAACGATGATACTGGACCTGTTTGG CCTCATTGGAGCATACGCCGCAGGGAGTTGCCGAGATGTGAGCACATCCATCTACGTCAT TGCCCTAGCTGGAGCTGTCCTGGTCTATGTGGTGATCCATGTTGTGTTCTGGCCTGACGA TTGTTACGTGAGCAATCAGAAGGACAAGGAGGTAGAGAAGCGGAGGGAGCGGCTTCTCCT TCTCGCGATCCTAGTGGCCACCATTGCCTACCAGGCTGGGCTAACCCCACCAGGTGGCTT TTGGGACAAAGACGATGGCGAATCCGGCCACCATGCAGGTGTCCCTGTCCTCCTCGACAA CTACCCAAGAAGGTATCATGCATTCTTCTACTGCAATGCAACAGCCTTCATGGCGTCCGT TGCACTCATCATCTTGCTCGTCAACCCTAAGCTGTACAAGCTAGGGATAAGGTGTTATGC GCTATACGTGTGCATGATGGTTGGCATGTTTGGACTCATGGGGGCCTACGCTGCTGGTAG TGCCCGGAAAGTGCGGACATCTATCTACGTCTTTGTGTTAGTCGGTGTGGTGATTGCCTT CCTTCTCGTGCAACTCGTATATTTCAACATTCAGGCAGTATGGAAGCAGCTCCTTGTGTT CCTCAACGTCAAGAAGGAGCCTACCTCTAATTCAGATTCAGCAAACACAACAAATGGGTC ATCATCTGATTCAAAACATAACATTGCTTCCAACACTGAAGAGGAGTCCAAAAAGAAAGA GTACCTGATGACACTTGCCATCCTGGCTGCAAGCGTCACATACCAGGCCGGCCTAAACCC GCCGGGTAGCATCTGGCAGGATGGAGGGAATGTGGGTAACCCCGTGATGCGTGACAACAA CTACCCTCGGTACAACGCGTTCTTCTACTGCAACTCTACATCCTTTATGGCATCCATTAT TGTCATCATCCTGCTGCTACAGCAGTATCAAAAGAAGTATGGTGGTTTCCTGCTCTATGC CATGAATATGGTCATCGTGGTCGATCTGCTCGGCCTCCTTGGGGCTTACGCGGCCGGCAG CTGCAGAGACTGGGAGACGTCTGGGTATGTCATCGCTCTGGCTGTTGTTGTGCTTGCCTG CATCATGATCCACTTCATGTTGTTGTACCATAATGGAAGGTCCAAAGGAAGGGTGGGAGG AGTCCAAGAGATTAACACACTTCCGGTCAACCATAGTTAAAAAAATTGAGCTAGAGTGCA TATATCATATATACTTGTGTTCATTTGATTTATACCATCACATGGTTGTTCTATGAATCC AGTAGATCTTCCTTGTTTTCCATCTTTAAGATATTGTCCCGTGCTTATGTATAGAAGTTA ATTTGTAGTTAGTGGTGTGCCAATAAGTTTGGTCAGCTACTTTAAGCTATATAATGAAAT GGATTTGCTAAACTAC