Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os06t0292400-00
CDS Infomation	cds chromosome:IRGSP-1.0:6:10738687:10742348:-1 gene:Os06g0292400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Embryogenesis transmembrane protein. (Os06t0292400-00)
Sequence	ATGGAAAATGGAAGGCAACCCAAGCTCACCATTGCTCTGACCAATACCACAGATGTCCTA ATACCAGTCAATGGACAGAGTGAAGAAAACAACACCAATGGGGATAGGGCAGAGTATGGC ATGGAAACTGGCAGCGACAGGCAAGACTCCATGAATGGTTTGTCCAGTAGGTTTTTATTG GCCAGTAGCCATGCACCCAGCATCACAGTTGATTTTGAGCTCTTGTGGAGACTGCGGAAG TACCTTGTAATGCTTGCAATCTTAGCAGTCAGTGTGACATATAATGCTGGATTAACCCCA CCGGGTGGATTTCGGACAAAAAACACGACTAATGGACGTGATGCTGGTGAACCTCTCCTT CGTGTTTACTTCTTCCCACGGTATGAGGTATTCTTTTACTGCAATGCAACAGCCTTTGCT GCATCTCTTGTCTTAATCATATTGCTTCTAAGTAAGAGTGTGACGAGGCAGAATTTGTGG CTCCGTTCAATGCAATTTACCATGATATTAGACCTATTCAGCTTGATGGGAGCCTATGCT GCTGGAAGCTGCAGGGCAGTAAAGTCTTCCATTTATATATGGGTCCTAGTTGTTGCTGTT TTCATATATGTTGGAATTCACATTTTGTTATGCACAAGGATATTTCCAAAATGGTTGAAA GAGAGAGTACAAATGCTGCTACAGAAAATTCAAGCAAAGTGGGGTGTACATGAGGAGAAC AGGAGCAACGATCAAAAAAGAAACATTGAGGAGGCTCGCAAGTTCATTTTGACACTTGCA ACTTTTTCTGCAACTATCACTTACCAAGCAGGATTAAGTCCACCAGGTGGTTTTTGGACT GAAGGCAGCAGTCATCCAGCAACCCCTATTCTTCGGAGTAACTATCTTCTTCGGTATAAT TTTTTCATGAGTTGCAATGCAACTTCATTTGTGGCATCTTTGGTCACAATCATGTTGCTT CTTAGCCCAGAATTGAGCATGCATGGAATAAGATCTAAAGCAGTTATTGTGTGTGTGGTA GCTGACCTATTGGGCCTGATAGGTGCGTATGCTGCAGGAAGCTGTAGAGATATAGCAGTT TCTTTCTATGTTATGTCTGTTTCCATCATAGTCTTGACCTGCTTTGTGGTTTTGGCTGGA ATCTTGGTTTACAAACCTGTCGCAGATTGGCTACAAAAGATCAAACCAGACACTCTGACA TGCATTGGTACAATTGGCCGGGTTTTTTCATTGGATTTTAAGAGAAACAGATCAATTGAT AGAGAACAAGAAAATTCTCAAGCAAATCATCTGCAAACGGAGCTTGAACCAGATGCACAA GTAAAAGAAAATGCTCTGCAAAGTACAGATATTGAAGAGGGAGAGTCACATGCGAAGAAT CAGCCTTCTGGCGAATGTCAATCTGCAAATTCCGAGGAGGCTGAGCCTGACTCTGACCAT CCATCGGCCGGTTATCAGCAATCTATGTGTAGCACAGATGTTGTGTACAACCTGCAGGGT CAGTCTATAGACGACCAAGCCCAACCAACCGCAGAGGAATCTATATCCAACACACAGCAC CCATCTGAAAAAAGTCAACATGCTACAAACTATAAGGACGGTATGCATCAATCTGCAGAC AATCAGCAAGATGCAAATACAAAGGAAAATTCTTCATCAATCGATGATTTCAAGACACTT AAGGATGGTATTTCTGACCCTGAGCCTCAATCTGCAGATAGCCATCAAGTTACAGATATG AAGGAACAATCCACAATGACTAACGACTTAAAGACTACAGATACTGAAGGCAGTATGCCT GACCCTGACAATCGATCTACAGACAGCCAGCATGTTATAAATAAAATGGAACAATCTTCG TCGACTGATGAACCTGGGACTGTTGTTACACCAGAAGAGAAAGTATCTCCTAATGTGCCT GTGGGACATAGTGAGATTGAAATTGCTGAAGATAATAAAATTGCTCCACATGTTGAGAAT GGCTATATTGACAAGAATGAAAGATCTCCCAATGAAGATGGCAATAGAAATCAAACTGCT AAGCATCTGAAGAAGTGCCGCACATATCTACTCCTCCTTGCGATTCTTGCAGTATCTCTG ACATACCAATCAGGTCTGAATCCACCAGGCGGCTTCTGGACAAGACACGAGGATTATCAT TCATCTGGTGATCACATCCTTGAGGACACTCACCACCCTCGCTATATTGCATTCTTCTAT CTAAATGCAATTGCCTTTGTTGCATCCGTTGTCATGATCATTATGCTCCTGAACAGAAGA ATGGCCAACAAGGTTATAAAACGGCGTGCACTGCAGATAGCAATGATAGTGATCCTCCTG TCCTTAACAGGGGCTTATGTTATGGGAAGCTGTAGGAAGACAAAGAATTCAGTTTATATC TCAGTGATGGTACTCCTCGTGCTTGCTTATGTTGGTATTCATGTTTTGATAGCAATTCAT GTAATCCCAGAAGGTTGGAAAAGGCAGGTGGCAGAAAAGCTAAACCGCCTCTCGTGCAGA CATTTGTGGTCGCCTCTCCATGGCAGCAACCAGACAGGGCATGGCAATGAGAAGGATTGG GAGCGAAGGCGCAATCTACTATTGATTCTTTCTATTCTCGCTGCGACTGTCACATACCAA GCTGGCATGAACCCTCCAGGAAGTGTATGGTCTGATGACAAGGATATCAACCGCACCCTT ACAGGCAACCCAGTCCTTCAGGAGAACAATTTAAGACGCTATAATGTGTTCTACTACTCA AATTCAGTCTCATTCGTGTCATCTGTTGTCATCACAATACTACTCGTGAACAAGGGATCC TGTGAGCATGGTATGAAGTTCTATGCATTGCGAGTGTGTTTGGCAGCAGGATTGGTTGGC CTCTTGATTGCTTATGCTGCAGGAAGCTGCAGGAAAGCAAAACAATCTATTTATCTCATC ATCGTTGCTGTTGCAGTTCTGATCTCCCTTATGATTCAAGTCTTCATTATGTCTTCAACA TATGATAAACTAGGAAAGCCATTGTGCAAGTGTATGGAAAGTTTGCTTGAGTGGATTTTT CAGACTAAGGAGGTTAGGCAAGATATTGGTTCTGAGATCCAAGGAAGTCCAGATCCTGGT GACAAAAGTGAAAGAAAAAGACACAAGTATCTGATGTTGCTTTCAATTTTGGCGGCCTCC ATCACATACCAAGCTGGTCTGAACCCACCTGGTGGCTTCTGGTCGGATGACAGTTCAGAT CCCCCAAAACACAAGGCTGGCGACCCAGTCCTTCATAATATTCATCCCCATCGCTACAAA GCATTCTTCTGCTTCAATGCATTCTCCTTCATGTCATCCATTGTTGTGATCATGCTTCTG CTGAGCAAATCTGTCAGGGAGAAGAATGTACCACTTGGGGTATTGCACTTGATCATGATA CTAGATTTGCTGGCTCTCATGACGGCTTTCGCTGCGGGAAGCTGCAGGAAATTCAGGACC TCAGTTTATGTCTATGGTCTAGTAATCGGTGTCACAATATACCTTCTGTTGGTGACCATT TTAGCAAGTAGCATCGCGAAATGTCTGAGATCAAGGAAGATAAGTAAGAATTCCTATGAG AAGCATCATGAACATCCTTCAAGAGTAAACACACTGCCACTTAAACAACAAGTTTGA

Peptide Sequence

PEP ID	Os06t0292400-00
PEP Infomation	pep chromosome:IRGSP-1.0:6:10738687:10742348:-1 gene:Os06g0292400 transcript:Os06t0292400-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Embryogenesis transmembrane protein. (Os06t0292400-00)
Sequence	MENGRQPKLTIALTNTTDVLIPVNGQSEENNTNGDRAEYGMETGSDRQDSMNGLSSRFLL ASSHAPSITVDFELLWRLRKYLVMLAILAVSVTYNAGLTPPGGFRTKNTTNGRDAGEPLL RVYFFPRYEVFFYCNATAFAASLVLIILLLSKSVTRQNLWLRSMQFTMILDLFSLMGAYA AGSCRAVKSSIYIWVLVVAVFIYVGIHILLCTRIFPKWLKERVQMLLQKIQAKWGVHEEN RSNDQKRNIEEARKFILTLATFSATITYQAGLSPPGGFWTEGSSHPATPILRSNYLLRYN FFMSCNATSFVASLVTIMLLLSPELSMHGIRSKAVIVCVVADLLGLIGAYAAGSCRDIAV SFYVMSVSIIVLTCFVVLAGILVYKPVADWLQKIKPDTLTCIGTIGRVFSLDFKRNRSID REQENSQANHLQTELEPDAQVKENALQSTDIEEGESHAKNQPSGECQSANSEEAEPDSDH PSAGYQQSMCSTDVVYNLQGQSIDDQAQPTAEESISNTQHPSEKSQHATNYKDGMHQSAD NQQDANTKENSSSIDDFKTLKDGISDPEPQSADSHQVTDMKEQSTMTNDLKTTDTEGSMP DPDNRSTDSQHVINKMEQSSSTDEPGTVVTPEEKVSPNVPVGHSEIEIAEDNKIAPHVEN GYIDKNERSPNEDGNRNQTAKHLKKCRTYLLLLAILAVSLTYQSGLNPPGGFWTRHEDYH SSGDHILEDTHHPRYIAFFYLNAIAFVASVVMIIMLLNRRMANKVIKRRALQIAMIVILL SLTGAYVMGSCRKTKNSVYISVMVLLVLAYVGIHVLIAIHVIPEGWKRQVAEKLNRLSCR HLWSPLHGSNQTGHGNEKDWERRRNLLLILSILAATVTYQAGMNPPGSVWSDDKDINRTL TGNPVLQENNLRRYNVFYYSNSVSFVSSVVITILLVNKGSCEHGMKFYALRVCLAAGLVG LLIAYAAGSCRKAKQSIYLIIVAVAVLISLMIQVFIMSSTYDKLGKPLCKCMESLLEWIF QTKEVRQDIGSEIQGSPDPGDKSERKRHKYLMLLSILAASITYQAGLNPPGGFWSDDSSD PPKHKAGDPVLHNIHPHRYKAFFCFNAFSFMSSIVVIMLLLSKSVREKNVPLGVLHLIMI LDLLALMTAFAAGSCRKFRTSVYVYGLVIGVTIYLLLVTILASSIAKCLRSRKISKNSYE KHHEHPSRVNTLPLKQQV

Transcript Sequence

Transcript ID	Os06t0292400-00
Transcript Infomation	cdna chromosome:IRGSP-1.0:6:10738687:10742348:-1 gene:Os06g0292400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Embryogenesis transmembrane protein. (Os06t0292400-00)
Sequence	ATGGAAAATGGAAGGCAACCCAAGCTCACCATTGCTCTGACCAATACCACAGATGTCCTA ATACCAGTCAATGGACAGAGTGAAGAAAACAACACCAATGGGGATAGGGCAGAGTATGGC ATGGAAACTGGCAGCGACAGGCAAGACTCCATGAATGGTTTGTCCAGTAGGTTTTTATTG GCCAGTAGCCATGCACCCAGCATCACAGTTGATTTTGAGCTCTTGTGGAGACTGCGGAAG TACCTTGTAATGCTTGCAATCTTAGCAGTCAGTGTGACATATAATGCTGGATTAACCCCA CCGGGTGGATTTCGGACAAAAAACACGACTAATGGACGTGATGCTGGTGAACCTCTCCTT CGTGTTTACTTCTTCCCACGGTATGAGGTATTCTTTTACTGCAATGCAACAGCCTTTGCT GCATCTCTTGTCTTAATCATATTGCTTCTAAGTAAGAGTGTGACGAGGCAGAATTTGTGG CTCCGTTCAATGCAATTTACCATGATATTAGACCTATTCAGCTTGATGGGAGCCTATGCT GCTGGAAGCTGCAGGGCAGTAAAGTCTTCCATTTATATATGGGTCCTAGTTGTTGCTGTT TTCATATATGTTGGAATTCACATTTTGTTATGCACAAGGATATTTCCAAAATGGTTGAAA GAGAGAGTACAAATGCTGCTACAGAAAATTCAAGCAAAGTGGGGTGTACATGAGGAGAAC AGGAGCAACGATCAAAAAAGAAACATTGAGGAGGCTCGCAAGTTCATTTTGACACTTGCA ACTTTTTCTGCAACTATCACTTACCAAGCAGGATTAAGTCCACCAGGTGGTTTTTGGACT GAAGGCAGCAGTCATCCAGCAACCCCTATTCTTCGGAGTAACTATCTTCTTCGGTATAAT TTTTTCATGAGTTGCAATGCAACTTCATTTGTGGCATCTTTGGTCACAATCATGTTGCTT CTTAGCCCAGAATTGAGCATGCATGGAATAAGATCTAAAGCAGTTATTGTGTGTGTGGTA GCTGACCTATTGGGCCTGATAGGTGCGTATGCTGCAGGAAGCTGTAGAGATATAGCAGTT TCTTTCTATGTTATGTCTGTTTCCATCATAGTCTTGACCTGCTTTGTGGTTTTGGCTGGA ATCTTGGTTTACAAACCTGTCGCAGATTGGCTACAAAAGATCAAACCAGACACTCTGACA TGCATTGGTACAATTGGCCGGGTTTTTTCATTGGATTTTAAGAGAAACAGATCAATTGAT AGAGAACAAGAAAATTCTCAAGCAAATCATCTGCAAACGGAGCTTGAACCAGATGCACAA GTAAAAGAAAATGCTCTGCAAAGTACAGATATTGAAGAGGGAGAGTCACATGCGAAGAAT CAGCCTTCTGGCGAATGTCAATCTGCAAATTCCGAGGAGGCTGAGCCTGACTCTGACCAT CCATCGGCCGGTTATCAGCAATCTATGTGTAGCACAGATGTTGTGTACAACCTGCAGGGT CAGTCTATAGACGACCAAGCCCAACCAACCGCAGAGGAATCTATATCCAACACACAGCAC CCATCTGAAAAAAGTCAACATGCTACAAACTATAAGGACGGTATGCATCAATCTGCAGAC AATCAGCAAGATGCAAATACAAAGGAAAATTCTTCATCAATCGATGATTTCAAGACACTT AAGGATGGTATTTCTGACCCTGAGCCTCAATCTGCAGATAGCCATCAAGTTACAGATATG AAGGAACAATCCACAATGACTAACGACTTAAAGACTACAGATACTGAAGGCAGTATGCCT GACCCTGACAATCGATCTACAGACAGCCAGCATGTTATAAATAAAATGGAACAATCTTCG TCGACTGATGAACCTGGGACTGTTGTTACACCAGAAGAGAAAGTATCTCCTAATGTGCCT GTGGGACATAGTGAGATTGAAATTGCTGAAGATAATAAAATTGCTCCACATGTTGAGAAT GGCTATATTGACAAGAATGAAAGATCTCCCAATGAAGATGGCAATAGAAATCAAACTGCT AAGCATCTGAAGAAGTGCCGCACATATCTACTCCTCCTTGCGATTCTTGCAGTATCTCTG ACATACCAATCAGGTCTGAATCCACCAGGCGGCTTCTGGACAAGACACGAGGATTATCAT TCATCTGGTGATCACATCCTTGAGGACACTCACCACCCTCGCTATATTGCATTCTTCTAT CTAAATGCAATTGCCTTTGTTGCATCCGTTGTCATGATCATTATGCTCCTGAACAGAAGA ATGGCCAACAAGGTTATAAAACGGCGTGCACTGCAGATAGCAATGATAGTGATCCTCCTG TCCTTAACAGGGGCTTATGTTATGGGAAGCTGTAGGAAGACAAAGAATTCAGTTTATATC TCAGTGATGGTACTCCTCGTGCTTGCTTATGTTGGTATTCATGTTTTGATAGCAATTCAT GTAATCCCAGAAGGTTGGAAAAGGCAGGTGGCAGAAAAGCTAAACCGCCTCTCGTGCAGA CATTTGTGGTCGCCTCTCCATGGCAGCAACCAGACAGGGCATGGCAATGAGAAGGATTGG GAGCGAAGGCGCAATCTACTATTGATTCTTTCTATTCTCGCTGCGACTGTCACATACCAA GCTGGCATGAACCCTCCAGGAAGTGTATGGTCTGATGACAAGGATATCAACCGCACCCTT ACAGGCAACCCAGTCCTTCAGGAGAACAATTTAAGACGCTATAATGTGTTCTACTACTCA AATTCAGTCTCATTCGTGTCATCTGTTGTCATCACAATACTACTCGTGAACAAGGGATCC TGTGAGCATGGTATGAAGTTCTATGCATTGCGAGTGTGTTTGGCAGCAGGATTGGTTGGC CTCTTGATTGCTTATGCTGCAGGAAGCTGCAGGAAAGCAAAACAATCTATTTATCTCATC ATCGTTGCTGTTGCAGTTCTGATCTCCCTTATGATTCAAGTCTTCATTATGTCTTCAACA TATGATAAACTAGGAAAGCCATTGTGCAAGTGTATGGAAAGTTTGCTTGAGTGGATTTTT CAGACTAAGGAGGTTAGGCAAGATATTGGTTCTGAGATCCAAGGAAGTCCAGATCCTGGT GACAAAAGTGAAAGAAAAAGACACAAGTATCTGATGTTGCTTTCAATTTTGGCGGCCTCC ATCACATACCAAGCTGGTCTGAACCCACCTGGTGGCTTCTGGTCGGATGACAGTTCAGAT CCCCCAAAACACAAGGCTGGCGACCCAGTCCTTCATAATATTCATCCCCATCGCTACAAA GCATTCTTCTGCTTCAATGCATTCTCCTTCATGTCATCCATTGTTGTGATCATGCTTCTG CTGAGCAAATCTGTCAGGGAGAAGAATGTACCACTTGGGGTATTGCACTTGATCATGATA CTAGATTTGCTGGCTCTCATGACGGCTTTCGCTGCGGGAAGCTGCAGGAAATTCAGGACC TCAGTTTATGTCTATGGTCTAGTAATCGGTGTCACAATATACCTTCTGTTGGTGACCATT TTAGCAAGTAGCATCGCGAAATGTCTGAGATCAAGGAAGATAAGTAAGAATTCCTATGAG AAGCATCATGAACATCCTTCAAGAGTAAACACACTGCCACTTAAACAACAAGTTTGAAGG TT