Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os06t0287500-02
CDS Infomation

cds chromosome:IRGSP-1.0:6:10435853:10438870:1 gene:Os06g0287500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Nbs1-ON. (Os06t0287500-01);Similar to NBS-LRR type R protein Nbs7-75. (Os06t0287500-02)
Sequence

ACAAGGAGATCTGCTGAAGAGATGGAGAAAAAACCCAGGCTGTTGAAAGCGTGGGTGGAG
CAAGTAAGGGATTTATCTTTTGACATTGAAGATTGCCTCGCTGAGTTTATGGTTCACGTG
GGGAGCAAAAGCTTGTCACAACAGTTGATGAAGCTCAAACATCGCCATCGCATTGCCATC
CAGATTCGTGACCTCAAATCAAGAGTTGAAGAAGTGAGCGATAGGAATTCACGGTACTCA
TTAATCAGCCCTAACACCGATGAGCATGACACCTTGAGGGATGAATTTCGCTACTGGTCA
GCTAAGAACATTGATGAGGCTGAACTTGTGGGTTTTGATGATGCAAAGGAAAGTATACTT
AATTTGATCGATGTCCATGCTAACCATGGTCTTGCTAAAGTGATCTTTGTAGTTGGCATG
GGCGGTCTAGGGAAGACAAGTCTTGTTAAAAAGGTTTACCATAGTATTAATATTGTTAAT
AATTTCTCATGCCGTGCTTGGGTCACTGTGTCACAGTCATTTGTCAGGACAGAGCTCCTG
AGAGGACTAATCAAGCAACTTTTGGGTGGTGATTCGGAAAATGAACACTTCAAAGGTCTT
CAGAGCATGCAAAGGAATGAGAAAGTGGAAGACCTCGTGGAAGACTTGAAGCAAGGTCTA
AAAGAGAAAAGGTACTTTGTTGTTCTAGATGACATGTGGAGCATAGATGCATTGAATTGG
CTTAATGAATCTGTTTTTCCTGACTCTAATAATGGAGGAAGTCGCATAATAGTAACCACG
AGAGATGCCAGCATAATTCAAAACTGTGCTTATCCTTCTTATCTGTACCGCCTTGAACCC
TTAAAAACAGATGATGCTAAACAATTGCTGCTGAGAAAATCAAATAAAAGTTATGAGGAC
ATAAAAGAGGCAAGGCTGAGAAGGTGTTTGATAGGATACTAG

Peptide Sequence

PEP ID

Os06t0287500-02
PEP Infomation

pep chromosome:IRGSP-1.0:6:10435853:10438870:1 gene:Os06g0287500 transcript:Os06t0287500-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Nbs1-ON. (Os06t0287500-01);Similar to NBS-LRR type R protein Nbs7-75. (Os06t0287500-02)
Sequence

TRRSAEEMEKKPRLLKAWVEQVRDLSFDIEDCLAEFMVHVGSKSLSQQLMKLKHRHRIAI
QIRDLKSRVEEVSDRNSRYSLISPNTDEHDTLRDEFRYWSAKNIDEAELVGFDDAKESIL
NLIDVHANHGLAKVIFVVGMGGLGKTSLVKKVYHSINIVNNFSCRAWVTVSQSFVRTELL
RGLIKQLLGGDSENEHFKGLQSMQRNEKVEDLVEDLKQGLKEKRYFVVLDDMWSIDALNW
LNESVFPDSNNGGSRIIVTTRDASIIQNCAYPSYLYRLEPLKTDDAKQLLLRKSNKSYED
IKEARLRRCLIGY

Transcript Sequence

Transcript ID

Os06t0287500-02
Transcript Infomation

cdna chromosome:IRGSP-1.0:6:10435853:10438870:1 gene:Os06g0287500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Nbs1-ON. (Os06t0287500-01);Similar to NBS-LRR type R protein Nbs7-75. (Os06t0287500-02)
Sequence

TAGGAGTTGCGGCACATCACCGCCGCCGCTCCTACACCGTCCGCCATAGCGATTCCCTTC
CATCTCGCAGCCATCCAAAGTGAGTCCTTCTTCGCCGTCTCCGATCTGGAACTTCACCGC
CGCCGCCGCCGCCGCATCTCCTCCTTCCTCTCTTGGCAACTGTCGGCGGCAGCCAACGGC
TCTCTTCCCCCCTTGTTCCTCCCGCTATCGCGAGTCAACGGGATGCTCGATTCGTTACAT
TTTTTTTAAGTACTAGTATTGCTAATTTGTTGGAGCAAGCTAACTGCATTGATCGCTCAC
GTGGTACTGCTTCGATCTTCACAATCACCCGATAAAAATAGTTGCGACAGAGAAAAAAAA
AAAGAAAGTGTGGGACGGAAGGGAAAGGGGGGAATTCGCTATAAAAGCACTCGGAATTGG
CCTGCTCGATGCGCCGAGGCTGACTGATCTCCTGCAGTTCCAAGACTGAACAGCGAGATC
TCTGCAGATCTGGGTGCAGTGATTTGATTCGCAGGTGTAAGCTTGATTAGCCATTACTTG
AGGAGTTAGGTTTCATGTTTGGATAATAATCAGGCCTACTTTTGGTACTGTCGTACTAAG
GACTGATCTGGTGGTAATGGCGGAGACGGTGTTGAGCATGGCAAGGTCGCTGGTGGGGAA
TGCCATCACGAAGGCCGGAGAGGCAGCTGCTGCAGAGATAAGCTTACTGATTGGTGTGAA
CAAGGAGATCTGCTGAAGAGATGGAGAAAAAACCCAGGCTGTTGAAAGCGTGGGTGGAGC
AAGTAAGGGATTTATCTTTTGACATTGAAGATTGCCTCGCTGAGTTTATGGTTCACGTGG
GGAGCAAAAGCTTGTCACAACAGTTGATGAAGCTCAAACATCGCCATCGCATTGCCATCC
AGATTCGTGACCTCAAATCAAGAGTTGAAGAAGTGAGCGATAGGAATTCACGGTACTCAT
TAATCAGCCCTAACACCGATGAGCATGACACCTTGAGGGATGAATTTCGCTACTGGTCAG
CTAAGAACATTGATGAGGCTGAACTTGTGGGTTTTGATGATGCAAAGGAAAGTATACTTA
ATTTGATCGATGTCCATGCTAACCATGGTCTTGCTAAAGTGATCTTTGTAGTTGGCATGG
GCGGTCTAGGGAAGACAAGTCTTGTTAAAAAGGTTTACCATAGTATTAATATTGTTAATA
ATTTCTCATGCCGTGCTTGGGTCACTGTGTCACAGTCATTTGTCAGGACAGAGCTCCTGA
GAGGACTAATCAAGCAACTTTTGGGTGGTGATTCGGAAAATGAACACTTCAAAGGTCTTC
AGAGCATGCAAAGGAATGAGAAAGTGGAAGACCTCGTGGAAGACTTGAAGCAAGGTCTAA
AAGAGAAAAGGTACTTTGTTGTTCTAGATGACATGTGGAGCATAGATGCATTGAATTGGC
TTAATGAATCTGTTTTTCCTGACTCTAATAATGGAGGAAGTCGCATAATAGTAACCACGA
GAGATGCCAGCATAATTCAAAACTGTGCTTATCCTTCTTATCTGTACCGCCTTGAACCCT
TAAAAACAGATGATGCTAAACAATTGCTGCTGAGAAAATCAAATAAAAGTTATGAGGACA
TAAAAGAGGCAAGGCTGAGAAGGTGTTTGATAGGATACTAGAAAGATGTGGAGGCTTACC
GCTAGCTCTTGTTGCGATAGGAGCTGTCCTTCGCACGAAATGCATAGAAGATTGGGAAAA
ACTGTCTCTGCAGCTATCTTCAGGGCTCAAAACAAAGTCAAGTCTTGAAGAAATGACTAG
AGTAATTACACTTAGTTATACACACTTGCCATCTCATCTCAAGCCATGTTTTCTGTACCT
TAGCATTTTCCCCGAGGATTTTCCAATAAAAAGGAGGTGTATGGTAAATAGATGGATAGC
CGAGGGTTTTGTGGATGCAAAGTTTGGAATGGCTATGGAGGATGTTGGAAATAGTTATTT
CGATGAACTCATCAATAGAAGCATGATTCAACC